; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093641_2025-06-19.093641_ZnDYv6/results/oligos_6-8nt/peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093641_2025-06-19.093641_ZnDYv6/results/oligos_6-8nt/peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093641_2025-06-19.093641_ZnDYv6/results/oligos_6-8nt/peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093641_2025-06-19.093641_ZnDYv6/results/oligos_6-8nt/peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093641_2025-06-19.093641_ZnDYv6/results/oligos_6-8nt/peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	8	14	2	40	1	46	0	7	0	9	8	17
c	24	15	42	6	49	3	49	0	50	37	24	5
g	9	14	3	3	0	1	0	43	0	4	11	18
t	9	7	3	1	0	0	1	0	0	0	7	10
//
; Sites	50
>site_0
TTTACACGCCGA
>site_1
TACCCACGCCGC
>site_2
ATCACACACCTA
>site_3
TGCCCACGCCCT
>site_4
CGAACACGCCGC
>site_5
CACACACGCACG
>site_6
CACACACACCCA
>site_7
CCCACACACCCA
>site_8
CACACACACCCA
>site_9
CCCACACACCCA
>site_10
CACACACGCACG
>site_11
CGCACACGCACA
>site_12
CACACACACCTG
>site_13
AACACACACCTG
>site_14
CACGCACGCCCA
>site_15
CCCACCCGCCAT
>site_16
GCGACACGCCGT
>site_17
TCGACACGCCGA
>site_18
GTTACACGCCTA
>site_19
GTCAAACGCCAA
>site_20
CGCACACGCCAC
>site_21
TGCCCACGCCCG
>site_22
CCCACCCGCCAT
>site_23
TCCACACGCACT
>site_24
CACACACGCACG
>site_25
ACCACACGCACA
>site_26
AGCACACGCACG
>site_27
CACCCACGCCGG
>site_28
CACACACGCGCA
>site_29
CCCACCCGCCGG
>site_30
CGCACACGCCTT
>site_31
CGCACACGCACA
>site_32
GGCACACGCCGC
>site_33
ACCCCACGCCTT
>site_34
CACACACGCGTG
>site_35
TGCCCACGCCAG
>site_36
ATCACACGCGGG
>site_37
AGCTCACGCCCT
>site_38
GACGCACGCCAG
>site_39
CACACACGCCGT
>site_40
TGCACACGCAGG
>site_41
GTCACACGCCCA
>site_42
CTCGCACGCCCG
>site_43
CCCACACGCCCG
>site_44
CGTACACGCCCT
>site_45
GCAACACGCCCG
>site_46
ACCACATGCCCG
>site_47
GCCACGCGCCAA
>site_48
GCGACACGCCAC
>site_49
TGCACACGCGCA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093641_2025-06-19.093641_ZnDYv6/results/oligos_6-8nt//peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093641_2025-06-19.093641_ZnDYv6/results/oligos_6-8nt//peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices_logo_m1_rc.png
;
a	6	14	2	29	0	37	0	4	2	31	0	3	4	14
c	26	14	32	4	39	1	39	5	38	2	37	3	20	9
g	5	8	5	6	2	2	1	32	1	5	3	34	8	6
t	4	5	2	2	0	1	1	0	0	3	1	1	9	12
//
; Sites	41
>site_0
AACACACGATCGCC
>site_1
CGCACATCCACGCT
>site_2
CACACACGCACGAA
>site_3
GCCCCACGCACGAG
>site_4
CCCACACACACGCA
>site_5
CACACACGCACGCA
>site_6
CACGCACGCACGCA
>site_7
CACGCACGCACGCA
>site_8
CACGCACGCACGCA
>site_9
CGCACACGCACACA
>site_10
CCGCCACGCACGCC
>site_11
GACACACCCTCGAT
>site_12
CCCAGGCGCACGTC
>site_13
GTGTCACGCACGGT
>site_14
TCCACACGCACTTC
>site_15
CACACACGCACGCG
>site_16
ACCACACGCACACA
>site_17
ACCACGCGCACCTC
>site_18
CATACACACACGTG
>site_19
AGCACACGCACGCA
>site_20
AGCACACGAACCCT
>site_21
CTCCCACCCACGCC
>site_22
TGTACACGCACGGT
>site_23
CAAACACACACGCG
>site_24
CGCACACGCACAGA
>site_25
CCCACACGGAGGCC
>site_26
GTCACACACGCGTG
>site_27
CACACACGCGTGTA
>site_28
ATCACACGCGGGAT
>site_29
CACGCACGCACCGA
>site_30
TCCGGACGCACGCC
>site_31
TGCACACGCAGGCT
>site_32
CCGACACGCGCGCT
>site_33
CCCACCCCCACGGT
>site_34
CCCCCACGCTCGCC
>site_35
CAGACACGCGCGGA
>site_36
CTCGCACGCCCGGT
>site_37
CCCACACGCCCGTA
>site_38
CACTCACCCACGTG
>site_39
GCAACTCGCACGGT
>site_40
CGGACAGGCACGTT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093641_2025-06-19.093641_ZnDYv6/results/oligos_6-8nt//peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093641_2025-06-19.093641_ZnDYv6/results/oligos_6-8nt//peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices_logo_m2_rc.png
;
a	11	7	0	41	1	42	38	3	43	11	10
c	8	12	42	1	1	2	4	5	1	9	11
g	9	16	3	3	2	0	2	1	1	18	17
t	18	11	1	1	42	2	2	37	1	8	8
//
; Sites	46
>site_0
TTCATAAGACA
>site_1
GTTATAATATT
>site_2
ATCATAATAAA
>site_3
TCCATAATAGT
>site_4
CACATACTACC
>site_5
GGCATAAAAGC
>site_6
GCCACAATAAA
>site_7
AACATAATTCG
>site_8
TCCATAACAAG
>site_9
TGCATATTAGC
>site_10
GCCATAATAGC
>site_11
TGCAGAATAGC
>site_12
GGCATAATAAT
>site_13
CAGATAATAGC
>site_14
AGGATAATAGT
>site_15
GCCATAACAGG
>site_16
ATCATAATACA
>site_17
TGCATCATAAT
>site_18
CTGATAATAGA
>site_19
ACCAGAATAGC
>site_20
TGCATAGTATG
>site_21
TTCATACTATG
>site_22
TGCATACTAGG
>site_23
TTCAAAATAAC
>site_24
AGCATAATCAG
>site_25
AACATAACAAA
>site_26
TGCATTATACG
>site_27
AGCCTAATAGA
>site_28
TGCATAATGTG
>site_29
TCCATAATACG
>site_30
GCCGTAATAAG
>site_31
AGCATTATAGT
>site_32
AACATAATATG
>site_33
TACATATTATG
>site_34
TGCATACTAAA
>site_35
TCCGTAATAGG
>site_36
CCCATAAAAGC
>site_37
CTCATAATACA
>site_38
GCCTTAATAGT
>site_39
CCCATAGTACG
>site_40
TTCATCATAGG
>site_41
ATCATAACAGT
>site_42
TGCATAATATA
>site_43
CTCGTAATACG
>site_44
GGCATAACATC
>site_45
CACATAAAAAC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093641_2025-06-19.093641_ZnDYv6/results/oligos_6-8nt//peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093641_2025-06-19.093641_ZnDYv6/results/oligos_6-8nt//peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices_logo_m3_rc.png
;
a	5	6	0	0	0	0	0	0	13	7
c	14	13	42	42	0	0	0	42	13	14
g	17	12	0	0	0	42	42	0	10	10
t	6	11	0	0	42	0	0	0	6	11
//
; Sites	42
>site_0
CCCCTGGCCA
>site_1
CGCCTGGCTG
>site_2
GGCCTGGCAA
>site_3
GCCCTGGCCT
>site_4
GGCCTGGCAT
>site_5
GCCCTGGCAC
>site_6
GTCCTGGCCC
>site_7
CACCTGGCGC
>site_8
TCCCTGGCGG
>site_9
CCCCTGGCCT
>site_10
CGCCTGGCTG
>site_11
CGCCTGGCTG
>site_12
CTCCTGGCGT
>site_13
CTCCTGGCAC
>site_14
CTCCTGGCAC
>site_15
AACCTGGCAC
>site_16
GGCCTGGCAG
>site_17
TCCCTGGCTA
>site_18
GGCCTGGCGC
>site_19
GCCCTGGCGG
>site_20
ACCCTGGCCC
>site_21
GTCCTGGCAC
>site_22
GTCCTGGCAC
>site_23
GTCCTGGCCA
>site_24
CTCCTGGCGT
>site_25
GCCCTGGCTT
>site_26
TTCCTGGCCC
>site_27
GCCCTGGCGC
>site_28
GCCCTGGCAG
>site_29
ATCCTGGCGG
>site_30
GTCCTGGCGT
>site_31
AGCCTGGCCT
>site_32
CCCCTGGCCT
>site_33
CCCCTGGCGT
>site_34
GGCCTGGCCA
>site_35
TACCTGGCTC
>site_36
GACCTGGCAG
>site_37
CACCTGGCAG
>site_38
CGCCTGGCAT
>site_39
AGCCTGGCCA
>site_40
TACCTGGCCC
>site_41
TGCCTGGCCA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093641_2025-06-19.093641_ZnDYv6/results/oligos_6-8nt//peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093641_2025-06-19.093641_ZnDYv6/results/oligos_6-8nt//peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices_logo_m4_rc.png
;
a	7	13	2	27	1	40	1	43	0	7	1	8	4	18
c	21	13	37	8	37	3	44	3	47	2	44	29	23	6
g	14	12	5	7	4	4	1	0	0	38	0	6	10	13
t	5	9	3	5	5	0	1	1	0	0	2	4	10	10
//
; Sites	47
>site_0
CTTTTACACGCCGA
>site_1
CGCACACACGTTCA
>site_2
CGTACCCACGCCGC
>site_3
ATCACGAACGCCTA
>site_4
CACGAACACGCCGC
>site_5
GGCACACACGCACG
>site_6
CACACACACACCCA
>site_7
CACCCACACACCCA
>site_8
CCCACACACCCACA
>site_9
CCCACACACACCCA
>site_10
CACCCACACACCCA
>site_11
CCCACACACCCACA
>site_12
CACACACACGCACG
>site_13
CACGCACACGCACA
>site_14
CACACACACACCTG
>site_15
TTAACACACACCTG
>site_16
GCCACGCACGCCCA
>site_17
GTCCCACCCGCCAT
>site_18
GCGCGACACGCCGT
>site_19
AACAGACACACCCT
>site_20
CTTCGACACGCCGA
>site_21
GCGTTACACGCCTA
>site_22
GGCGCACACGCCAC
>site_23
AACATACACGACCA
>site_24
GGCACATACGCTTT
>site_25
GTCATACACGCGCT
>site_26
GCCACACTCGCTTC
>site_27
TCCCCACCCGCCAT
>site_28
CGCACACACGCACG
>site_29
TACACACACGTGCA
>site_30
CCCACCCACGCCGG
>site_31
AACACACACGCGCA
>site_32
CGCCCACCCGCCGG
>site_33
TTCGCACACGCCTT
>site_34
GCCGCACACGCACA
>site_35
AGGGCACACGCCGC
>site_36
GTCACACACGCGTG
>site_37
CCCACCCACGCTTT
>site_38
CGATCACACGCGGG
>site_39
CGGACGCACGCCAG
>site_40
GGCACACACGCCGT
>site_41
ATGTCACACGCCCA
>site_42
TGCAGACACGCGCG
>site_43
ACCTCGCACGCCCG
>site_44
GACCCACACGCCCG
>site_45
CCCGTACACGCCCT
>site_46
GACACAGACGCATC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093641_2025-06-19.093641_ZnDYv6/results/oligos_6-8nt//peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093641_2025-06-19.093641_ZnDYv6/results/oligos_6-8nt//peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2025-06-19.093653
; Job done	2025-06-19.093654
; Seconds	0.14
;	user	0.14
;	system	0.04
;	cuser	1.15
;	csystem	0.25
