; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093750_2025-06-19.093750_1W0rgp/results/oligos_6-8nt/peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093750_2025-06-19.093750_1W0rgp/results/oligos_6-8nt/peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093750_2025-06-19.093750_1W0rgp/results/oligos_6-8nt/peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093750_2025-06-19.093750_1W0rgp/results/oligos_6-8nt/peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	9	11	0	0	1	26	0	2	28	3	7
c	7	4	27	0	0	0	22	0	0	12	4
g	3	12	0	29	0	4	4	2	2	7	14
t	11	3	3	1	29	0	4	26	0	8	5
//
; Sites	30
>site_0
AGCTTACTACT
>site_1
ACTGTACTACA
>site_2
TGCGTGCTACC
>site_3
GTCGTGCTATC
>site_4
TGCGTACGAAA
>site_5
TACGAACTAGG
>site_6
TTCGTAGTACG
>site_7
CGCGTACTACG
>site_8
CGCGTACTACG
>site_9
TACGTAGTACG
>site_10
TACGTACTACG
>site_11
TACGTAGTACG
>site_12
TACGTACTGTA
>site_13
ACTGTACTACG
>site_14
TACGTAGTACA
>site_15
TACGTACAATA
>site_16
AACGTACTAGC
>site_17
AGCGTACTATG
>site_18
AACGTACTGTA
>site_19
ACTGTACTAGA
>site_20
AGCGTACTAGG
>site_21
CGCGTATTAAT
>site_22
CGCGTATTATG
>site_23
CGCGTATTAAG
>site_24
CGCGTATTATG
>site_25
AGCGTACTAGG
>site_26
CCCGTACAAGC
>site_27
GACGTGCTACT
>site_28
TACGTACGATT
>site_29
GTCGTGCTAGT
a	3	6	16	17	16	1	1	0	0	14	3	5
c	6	5	0	0	0	15	0	15	0	1	6	3
g	4	3	0	0	1	1	16	2	17	1	5	2
t	4	3	1	0	0	0	0	0	0	1	3	7
//
; Sites	17
>site_0
CTAAGCGCGAAC
>site_1
CAAAACGCGACG
>site_2
ACAAACGCGTCT
>site_3
AAAAACGGGAGA
>site_4
CGAAACGCGAGT
>site_5
TCAAACGCGAGT
>site_6
AAAAACGCGCCC
>site_7
GTAAACGCGAAC
>site_8
TAAAACGCGGTT
>site_9
GAAAACGCGATT
>site_10
CCAAACGCGAGT
>site_11
GCAAACACGACA
>site_12
CATAACGCGATG
>site_13
TCAAACGCGAGT
>site_14
TGAAACGGGACA
>site_15
GGAAAGGCGAAA
>site_16
CTAAAAGCGACA
a	3	4	16	0	1	17	1	0	0	1	2	1
c	7	7	0	15	1	1	17	18	1	1	4	7
g	7	6	1	2	16	0	0	0	17	1	8	5
t	1	1	1	1	0	0	0	0	0	15	4	5
//
; Sites	18
>site_0
GAACGACCGGGG
>site_1
CCACGACCGTCG
>site_2
TGACGCCCGTAC
>site_3
GAACGACCGATT
>site_4
GGGCGACCGTGC
>site_5
AAACGACCGTGC
>site_6
ACACGACCGTGC
>site_7
CCACGACCCTTC
>site_8
CCACCACCGTCT
>site_9
CAACGACCGTGT
>site_10
CGACGACCGCAC
>site_11
ATACAACCGTGG
>site_12
CGACGAACGTTG
>site_13
CGAGGACCGTGA
>site_14
GCATGACCGTGT
>site_15
GGTCGACCGTCC
>site_16
GCACGACCGTCT
>site_17
GCAGGACCGTTG
a	2	6	19	20	0	21	3	3	19	2	2	5	3
c	9	8	0	0	0	1	1	17	0	2	2	5	8
g	5	6	3	1	2	0	18	0	2	2	17	5	8
t	6	2	0	1	20	0	0	2	1	16	1	7	3
//
; Sites	22
>site_0
GCAATAGCATAGC
>site_1
GGAATAGCATGGC
>site_2
GCAATAGAAAGAC
>site_3
GAATTAGAATGGG
>site_4
CGAATCGAATGCG
>site_5
TAAATAGCTTTGT
>site_6
CGAATAGCATGTG
>site_7
GCGATAGCACGAC
>site_8
CGAATAGCGAGCG
>site_9
CCAATAACAGGTC
>site_10
CGAAGAGCATACG
>site_11
CCAATAGCATGCT
>site_12
TCAAGAGCATGCC
>site_13
TAAATAGTATCAC
>site_14
TAAATAACAGGTA
>site_15
TTAATAGTGTGAA
>site_16
CAAATAGCATGGG
>site_17
CTGATAGCATGTG
>site_18
CCAATAACATGAG
>site_19
TCAGTAGCACGTC
>site_20
AAGATAGCATGTA
>site_21
AGAATACCATCTT
a	9	7	39	1	1	0	3	0	1	4	11
c	13	18	4	0	43	42	40	3	36	21	16
g	9	10	1	0	0	2	2	38	8	13	10
t	14	10	1	44	1	1	0	4	0	7	8
//
; Sites	45
>site_0
AGATCCAGCGT
>site_1
CAATCCCGGCA
>site_2
TCATCCCTCCG
>site_3
CCATCCCTCAG
>site_4
CCATCCCGGCC
>site_5
TAATCCCCCTT
>site_6
TTATCCCGGTC
>site_7
TTATCCCGAAC
>site_8
CGATCGCGCCA
>site_9
AGATCCCGCCC
>site_10
TCATCCCGCGC
>site_11
CCTTCCCGCCG
>site_12
TCATTCCGCGA
>site_13
TCCTCCCGCCC
>site_14
AAATACCGCCT
>site_15
GTCTCCCGCCC
>site_16
ACATCCCCCGC
>site_17
CTATCCCGGCA
>site_18
GGCTCCCGCCG
>site_19
CGATCCAGCCA
>site_20
GAATCCCGCTG
>site_21
AAATCCCGCTG
>site_22
AAATCCCGCTC
>site_23
TGATCCCGCCC
>site_24
CTATCCCGCAA
>site_25
TTATCCCGGCA
>site_26
GCATCCCGGGC
>site_27
GCATCGCGCGA
>site_28
TTATCCCCCCT
>site_29
CCATCCGGCCC
>site_30
CTATCCAGCGA
>site_31
TGATCTCGCTA
>site_32
GTAACCCGCGT
>site_33
CAATCCCGGCG
>site_34
ATATCCCGCGA
>site_35
ACATCCCGCGC
>site_36
CGCTCCCGCGG
>site_37
TCATCCCGCCC
>site_38
TCATCCCTCTC
>site_39
ACATCCCGCGT
>site_40
GGATCCGGCAC
>site_41
GCGTCCCGCCT
>site_42
GCATCCCTCCG
>site_43
TCATCCCGGCG
>site_44
CGATCCCGCGT
; Host name	rsat
; Job started	2025-06-19.093801
; Job done	2025-06-19.093801
; Seconds	0.13
;	user	0.13
;	system	0
;	cuser	0
;	csystem	0
