; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/06/20/dyad-analysis_2025-06-20.121417_jADSCt_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/www-data/2025/06/20/dyad-analysis_2025-06-20.121417_jADSCt_pssm_count_matrices.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/06/20/dyad-analysis_2025-06-20.121417_jADSCt_pssm_count_matrices.tf
; Input format transfac
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/06/20/dyad-analysis_2025-06-20.121417_jADSCt_pssm_count_matrices.txt
; Output format tab
; pseudo-weight 1
a 12 49 6 67 4 56 1 66 2 56 6 49 15
c 50 2 64 1 63 2 67 1 65 3 53 9 41
g 2 12 0 3 0 6 1 0 1 5 5 5 4
t 7 8 1 0 4 7 2 4 3 7 7 8 11
//
a 6 7 18 0 18 7 6 2 7 5 14 3 0 0 18 5 6
c 4 9 0 18 0 8 3 7 3 5 2 7 0 18 0 6 3
g 4 0 0 0 0 2 4 4 2 3 2 0 18 0 0 0 3
t 4 2 0 0 0 1 5 5 6 5 0 8 0 0 0 7 6
//
a 4 12 0 30 0 18 0 19 7 20 8 21 5 25 3 21 0 30 0 21 1
c 21 3 30 0 30 2 18 5 13 1 17 2 20 1 21 2 30 0 30 6 17
g 1 5 0 0 0 6 5 2 1 4 0 2 1 2 0 3 0 0 0 0 3
t 4 10 0 0 0 4 7 4 9 5 5 5 4 2 6 4 0 0 0 3 9
//
a 5 3 16 0 0 7 3 4 2 5 3 4 6 3 7 1 1 0 0 0 2 2
c 4 2 0 0 16 6 3 6 2 2 1 2 0 8 0 2 2 0 16 16 3 5
g 4 4 0 0 0 2 1 2 0 3 5 0 3 1 4 1 0 0 0 0 4 1
t 3 7 0 16 0 1 9 4 12 6 7 10 7 4 5 12 13 16 0 0 7 8
//
a 5 18 0 26 0 13 3 14 3 11 3 15 4 12 3 17 6 17 4 16 6 19 3 18 0 26 0 13 3
c 12 0 26 0 26 2 15 3 16 6 18 4 16 6 15 5 10 2 15 3 16 2 16 1 26 0 26 5 16
g 3 5 0 0 0 4 1 2 1 4 1 2 3 6 2 2 3 2 3 3 1 1 2 2 0 0 0 2 2
t 6 3 0 0 0 7 7 7 6 5 4 5 3 2 6 2 7 5 4 4 3 4 5 5 0 0 0 6 5
//
a 7 6 0 0 0 6 6 8 4 4 4 6 0 0 0 8 4
c 0 3 16 0 16 3 2 1 9 1 3 0 0 0 16 5 4
g 6 5 0 0 0 1 1 2 0 1 1 2 0 0 0 0 1
t 3 2 0 16 0 6 7 5 3 10 8 8 16 16 0 3 7
//
; Host name rsat
; Job started 2025-06-20.121423
; Job done 2025-06-20.121423
; Seconds 0.12
; user 0.12
; system 0.03
; cuser 0
; csystem 0