; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/06/20/dyad-analysis_2025-06-20.121417_jADSCt_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/06/20/dyad-analysis_2025-06-20.121417_jADSCt_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/06/20/dyad-analysis_2025-06-20.121417_jADSCt_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/06/20/dyad-analysis_2025-06-20.121417_jADSCt_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/06/20/dyad-analysis_2025-06-20.121417_jADSCt_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	12	49	6	67	4	56	1	66	2	56	6	49	15
c	50	2	64	1	63	2	67	1	65	3	53	9	41
g	2	12	0	3	0	6	1	0	1	5	5	5	4
t	7	8	1	0	4	7	2	4	3	7	7	8	11
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/20//dyad-analysis_2025-06-20.121417_jADSCt_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/20//dyad-analysis_2025-06-20.121417_jADSCt_pssm_count_matrices_logo_m1_rc.png
;
a	6	7	18	0	18	7	6	2	7	5	14	3	0	0	18	5	6
c	4	9	0	18	0	8	3	7	3	5	2	7	0	18	0	6	3
g	4	0	0	0	0	2	4	4	2	3	2	0	18	0	0	0	3
t	4	2	0	0	0	1	5	5	6	5	0	8	0	0	0	7	6
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/20//dyad-analysis_2025-06-20.121417_jADSCt_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/20//dyad-analysis_2025-06-20.121417_jADSCt_pssm_count_matrices_logo_m2_rc.png
;
a	4	12	0	30	0	18	0	19	7	20	8	21	5	25	3	21	0	30	0	21	1
c	21	3	30	0	30	2	18	5	13	1	17	2	20	1	21	2	30	0	30	6	17
g	1	5	0	0	0	6	5	2	1	4	0	2	1	2	0	3	0	0	0	0	3
t	4	10	0	0	0	4	7	4	9	5	5	5	4	2	6	4	0	0	0	3	9
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/20//dyad-analysis_2025-06-20.121417_jADSCt_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/20//dyad-analysis_2025-06-20.121417_jADSCt_pssm_count_matrices_logo_m3_rc.png
;
a	5	3	16	0	0	7	3	4	2	5	3	4	6	3	7	1	1	0	0	0	2	2
c	4	2	0	0	16	6	3	6	2	2	1	2	0	8	0	2	2	0	16	16	3	5
g	4	4	0	0	0	2	1	2	0	3	5	0	3	1	4	1	0	0	0	0	4	1
t	3	7	0	16	0	1	9	4	12	6	7	10	7	4	5	12	13	16	0	0	7	8
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/20//dyad-analysis_2025-06-20.121417_jADSCt_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/20//dyad-analysis_2025-06-20.121417_jADSCt_pssm_count_matrices_logo_m4_rc.png
;
a	5	18	0	26	0	13	3	14	3	11	3	15	4	12	3	17	6	17	4	16	6	19	3	18	0	26	0	13	3
c	12	0	26	0	26	2	15	3	16	6	18	4	16	6	15	5	10	2	15	3	16	2	16	1	26	0	26	5	16
g	3	5	0	0	0	4	1	2	1	4	1	2	3	6	2	2	3	2	3	3	1	1	2	2	0	0	0	2	2
t	6	3	0	0	0	7	7	7	6	5	4	5	3	2	6	2	7	5	4	4	3	4	5	5	0	0	0	6	5
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/20//dyad-analysis_2025-06-20.121417_jADSCt_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/20//dyad-analysis_2025-06-20.121417_jADSCt_pssm_count_matrices_logo_m5_rc.png
;
a	7	6	0	0	0	6	6	8	4	4	4	6	0	0	0	8	4
c	0	3	16	0	16	3	2	1	9	1	3	0	0	0	16	5	4
g	6	5	0	0	0	1	1	2	0	1	1	2	0	0	0	0	1
t	3	2	0	16	0	6	7	5	3	10	8	8	16	16	0	3	7
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/20//dyad-analysis_2025-06-20.121417_jADSCt_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/20//dyad-analysis_2025-06-20.121417_jADSCt_pssm_count_matrices_logo_m6_rc.png
;
; Host name	rsat
; Job started	2025-06-20.121423
; Job done	2025-06-20.121425
; Seconds	0.13
;	user	0.13
;	system	0.06
;	cuser	1.43
;	csystem	0.2