; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/06/25/oligo-analysis_2025-06-25.010354_U9cy5B_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/06/25/oligo-analysis_2025-06-25.010354_U9cy5B_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/06/25/oligo-analysis_2025-06-25.010354_U9cy5B_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/06/25/oligo-analysis_2025-06-25.010354_U9cy5B_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/06/25/oligo-analysis_2025-06-25.010354_U9cy5B_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	344	383	626	656	662	650	641	660	654	628	386	350	336
c	64	62	16	15	13	11	13	7	7	6	43	52	64
g	83	97	34	27	30	35	32	18	22	24	99	107	110
t	230	179	45	23	16	25	35	36	38	63	193	212	211
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/25//oligo-analysis_2025-06-25.010354_U9cy5B_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/25//oligo-analysis_2025-06-25.010354_U9cy5B_pssm_count_matrices_logo_m1_rc.png
;
a	48	46	106	106	106	106	0	106	53	46
c	18	19	0	0	0	0	0	0	7	9
g	14	13	0	0	0	0	106	0	20	12
t	26	28	0	0	0	0	0	0	26	39
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/25//oligo-analysis_2025-06-25.010354_U9cy5B_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/25//oligo-analysis_2025-06-25.010354_U9cy5B_pssm_count_matrices_logo_m2_rc.png
;
a	258	231	484	46	49	495	522	516	510	228	244
c	56	57	7	17	23	26	10	3	11	54	45
g	55	77	7	15	21	20	12	11	15	75	82
t	201	205	72	492	477	29	26	40	34	213	199
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/25//oligo-analysis_2025-06-25.010354_U9cy5B_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/25//oligo-analysis_2025-06-25.010354_U9cy5B_pssm_count_matrices_logo_m3_rc.png
;
a	51	54	104	104	0	104	104	104	57	45
c	13	15	0	0	0	0	0	0	5	9
g	15	17	0	0	104	0	0	0	20	19
t	25	18	0	0	0	0	0	0	22	31
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/25//oligo-analysis_2025-06-25.010354_U9cy5B_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/25//oligo-analysis_2025-06-25.010354_U9cy5B_pssm_count_matrices_logo_m4_rc.png
;
a	27	25	2	2	80	14	15	80	78	41	29
c	12	10	0	2	0	56	62	1	2	8	9
g	13	14	2	72	0	4	1	0	0	18	13
t	30	33	78	6	2	8	4	1	2	15	31
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/25//oligo-analysis_2025-06-25.010354_U9cy5B_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/25//oligo-analysis_2025-06-25.010354_U9cy5B_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2025-06-25.010400
; Job done	2025-06-25.010401
; Seconds	0.14
;	user	0.14
;	system	0.07
;	cuser	1.25
;	csystem	0.17