peak-motifs overlapped

Motif discovery

Motif 1 oligos_6nt_mkv3_m1

k-mer sig=11.21; evalue=6.2e-12

ktaCAGATGta

TACATCTGTAM

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ktaCAGATGta

ZBTB18 MA0698.2 D 11 1.0000 0.857 0.857 NA NA

Ptf1A MA1618.2 D 9 0.8182 0.966 0.790 NA NA

TAL1::TCF3 MA0091.2 R 10 0.9091 0.840 0.764 NA NA

Total matches= 49 (46 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 118 (17.66%)
Max nb of predicted sites per peak: 3
(Chr7L:114667458-114667858)
Mean nb of predicted sites per peak: 1.12

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 2 oligos_6nt_mkv3_m2

k-mer sig=5.67; evalue=2.1e-06

rvAGGTCAsd

HSTGACCTBY

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor rvAGGTCAsd

NR2F1 MA0017.3 D 10 0.8333 0.942 0.785 NA NA

ESRRB MA0141.4 D 9 0.8182 0.861 0.704 NA NA

NR4A2 MA0160.3 D 8 0.8000 0.878 0.702 NA NA

Total matches= 74 (71 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 85 (12.72%)
Max nb of predicted sites per peak: 3
(Chr2S:121216066-121216466)
Mean nb of predicted sites per peak: 1.14

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 3 oligos_6nt_mkv3_m3

k-mer sig=5.11; evalue=7.8e-06

aaAAACAAAGva

TBCTTTGTTTTT

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor aaAAACAAAGva

Sox6 MA0515.1 R 10 0.8333 0.843 0.702 NA NA

SOX4 MA0867.3 D 8 0.6667 0.956 0.637 NA NA

Foxj3 MA0851.2 D 9 0.7500 0.849 0.637 NA NA

Total matches= 48 (45 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 73 (10.93%)
Max nb of predicted sites per peak: 2
(Chr7S:89346411-89346811)
Mean nb of predicted sites per peak: 1.07

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 4 oligos_6nt_mkv3_m4

k-mer sig=4.98; evalue=1e-05

rrAAACAATGvm

KBCATTGTTTYY

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor rrAAACAATGvm

Sox6 MA0515.1 R 10 0.8333 0.901 0.751 NA NA

Sox17 MA0078.3 D 10 0.8333 0.875 0.729 NA NA

Sox7 MA2095.1 D 10 0.8333 0.860 0.717 NA NA

Total matches= 46 (43 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 71 (10.63%)
Max nb of predicted sites per peak: 2
(Chr6S:131576915-131577315)
Mean nb of predicted sites per peak: 1.04

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 5 oligos_6nt_mkv3_m5

k-mer sig=4.21; evalue=6.2e-05

cbCCCACCss

SSGGTGGGVG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cbCCCACCss

KLF5 MA0599.1 D 10 1.0000 0.768 0.768 NA NA

KLF4 MA0039.5 D 8 0.8000 0.868 0.695 NA NA

PATZ1 MA1961.2 R 10 0.9091 0.762 0.693 NA NA

Total matches= 31 (28 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 69 (10.33%)
Max nb of predicted sites per peak: 2
(Chr9_10L:85739758-85740158)
Mean nb of predicted sites per peak: 1.13

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 6 positions_6nt_m1

k-mer sig=11.82; evalue=1.5e-12

ATATATATATATATATATATATAT

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ATATATATATATATATATATATAT

Total matches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 10 (1.50%)
Max nb of predicted sites per peak: 57
(Chr2S:15241395-15241795)
Mean nb of predicted sites per peak: 21.20

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 7 positions_6nt_m2

k-mer sig=8.84; evalue=1.4e-09

rmACAATGsv

BSCATTGTKY

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor rmACAATGsv

Sox6 MA0515.1 R 9 0.8182 0.924 0.756 NA NA

Sox17 MA0078.3 D 9 0.8182 0.922 0.754 NA NA

Sox5 MA0087.3 D 8 0.8000 0.922 0.737 NA NA

Total matches= 28 (25 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 243 (36.38%)
Max nb of predicted sites per peak: 5
(Chr4S:110745394-110745794)
Mean nb of predicted sites per peak: 1.28

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 8 positions_6nt_m3

k-mer sig=11.82; evalue=1.5e-12

mdawatAaAtAaAaaAtataTtry

RYAATATATTTTTTATTTATWTHK

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mdawatAaAtAaAaaAtataTtry

FOXD3 MA0041.3 D 14 0.5833 0.769 0.449 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 93 (13.92%)
Max nb of predicted sites per peak: 48
(Chr2S:15241395-15241795)
Mean nb of predicted sites per peak: 3.62

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 9 positions_6nt_m4

k-mer sig=11.44; evalue=3.6e-12

mwttaTaTTTTaTtTaTayy

RRTATAAATAAAATATAAWK

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mwttaTaTTTTaTtTaTayy

MEF2D MA0773.1 R 12 0.6000 0.721 0.432 NA NA

FOXC2 MA0846.2 R 11 0.5500 0.747 0.411 NA NA

FOXC1 MA0032.2 R 11 0.5500 0.746 0.410 NA NA

Total matches= 4 (1 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 104 (15.57%)
Max nb of predicted sites per peak: 4
(Chr5L:160135739-160136139)
Mean nb of predicted sites per peak: 1.36

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 10 positions_6nt_m5

k-mer sig=11.82; evalue=1.5e-12

vwwwwTAaAAAtAtAAaAttmw

WKAATTTTATATTTTTAWWWWB

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor vwwwwTAaAAAtAtAAaAttmw

Total matches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 106 (15.87%)
Max nb of predicted sites per peak: 53
(Chr2S:15241395-15241795)
Mean nb of predicted sites per peak: 3.12

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 11 oligos_7nt_mkv4_m1

k-mer sig=1.87; evalue=0.013

ycCCCCTCCcyc

GRGGGAGGGGGR

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ycCCCCTCCcyc

PATZ1 MA1961.2 R 11 0.9167 0.886 0.812 NA NA

ZNF148 MA1653.2 D 10 0.8333 0.957 0.798 NA NA

ZNF281 MA1630.3 R 10 0.8333 0.870 0.725 NA NA

Total matches= 25 (22 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 122 (18.26%)
Max nb of predicted sites per peak: 8
(Chr8L:23066160-23066560)
Mean nb of predicted sites per peak: 1.84

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 12 oligos_7nt_mkv4_m2

k-mer sig=1.60; evalue=0.025

rwACAATGGry

RYCCATTGTWY

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor rwACAATGGry

Sox17 MA0078.3 D 9 0.7500 0.955 0.716 NA NA

Sox7 MA2095.1 D 9 0.7500 0.924 0.693 NA NA

Sox5 MA0087.3 D 8 0.7273 0.945 0.687 NA NA

Total matches= 24 (21 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 116 (17.37%)
Max nb of predicted sites per peak: 4
(Chr5S:3112340-3112740)
Mean nb of predicted sites per peak: 1.11

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 13 oligos_7nt_mkv4_m3

k-mer sig=1.47; evalue=0.034

waTACAGTAtm

KATACTGTATW

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor waTACAGTAtm

ZBTB32 MA1580.1 D 10 0.9091 0.909 0.827 NA NA

OSR1 MA1542.2 R 8 0.7273 0.773 0.562 NA NA

ZKSCAN1 MA1585.2 D 8 0.6667 0.716 0.477 NA NA

Total matches= 7 (4 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 79 (11.83%)
Max nb of predicted sites per peak: 3
(Chr9_10S:27735186-27735586)
Mean nb of predicted sites per peak: 1.14

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 14 oligos_7nt_mkv4_m4

k-mer sig=1.37; evalue=0.043

mmACATCTGGmv

BKCCAGATGTKK

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mmACATCTGGmv

ZBTB18 MA0698.2 R 11 0.9167 0.964 0.883 NA NA

TAL1::TCF3 MA0091.2 D 10 0.8333 0.836 0.697 NA NA

Ptf1A MA1618.2 R 9 0.7500 0.919 0.689 NA NA

Total matches= 34 (31 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 91 (13.62%)
Max nb of predicted sites per peak: 2
(Chr7S:5571888-5572288)
Mean nb of predicted sites per peak: 1.10

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 15 oligos_7nt_mkv4_m5

k-mer sig=1.16; evalue=0.069

dsCCTCAGGsh

DSCCTGAGGSH

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor dsCCTCAGGsh

TFAP2A MA0003.5 D 9 0.8182 0.957 0.783 NA NA

TFAP2C MA0814.3 R 9 0.8182 0.943 0.771 NA NA

TFAP2E MA1569.2 D 9 0.8182 0.830 0.679 NA NA

Total matches= 12 (9 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 65 (9.73%)
Max nb of predicted sites per peak: 3
(Chr1L:210384559-210384959)
Mean nb of predicted sites per peak: 1.12

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 16 positions_7nt_m1

k-mer sig=2.64; evalue=0.0023

aaATAAAAAATra

TYATTTTTTATTT

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor aaATAAAAAATra

Foxq1 MA0040.2 R 10 0.7692 0.793 0.610 NA NA

ZNF384 MA1125.2 D 8 0.6154 0.898 0.553 NA NA

CDX4 MA1473.2 D 8 0.5714 0.912 0.521 NA NA

Total matches= 22 (19 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 107 (16.02%)
Max nb of predicted sites per peak: 3
(Chr9_10L:102543512-102543912)
Mean nb of predicted sites per peak: 1.17

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 17 positions_7nt_m2

k-mer sig=2.14; evalue=0.0072

rwAAAATATTTTwy

RWAAAATATTTTWY

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor rwAAAATATTTTwy

Arid5a MA0602.2 R 8 0.5714 0.828 0.473 NA NA

MEF2A MA0052.5 D 9 0.6000 0.780 0.468 NA NA

Hmga1 MA2124.1 D 7 0.4667 0.858 0.400 NA NA

Total matches= 4 (1 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 54 (8.08%)
Max nb of predicted sites per peak: 4
(Chr8L:116810171-116810571)
Mean nb of predicted sites per peak: 2.15

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 18 positions_7nt_m3

k-mer sig=1.70; evalue=0.02

aaAAAAtAAAaa

TTTTTATTTTTT

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor aaAAAAtAAAaa

FOXD3 MA0041.3 D 12 0.8571 0.819 0.702 NA NA

FOXD2 MA0847.4 D 11 0.9167 0.705 0.646 NA NA

MEF2C MA0497.2 D 10 0.7692 0.766 0.590 NA NA

Total matches= 18 (15 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 118 (17.66%)
Max nb of predicted sites per peak: 13
(Chr6S:130145766-130146166)
Mean nb of predicted sites per peak: 2.41

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 19 positions_7nt_m4

k-mer sig=2.64; evalue=0.0023

awaTAAAAAAATaa

TTATTTTTTTATWT

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor awaTAAAAAAATaa

ZNF384 MA1125.2 D 8 0.5714 0.900 0.515 NA NA

Foxj3 MA0851.2 D 9 0.6429 0.765 0.492 NA NA

FOXC2 MA0846.2 D 10 0.6667 0.723 0.482 NA NA

Total matches= 18 (15 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 120 (17.96%)
Max nb of predicted sites per peak: 56
(Chr2S:15241395-15241795)
Mean nb of predicted sites per peak: 2.98

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 20 positions_7nt_m5

k-mer sig=1.01; evalue=0.098

rmAATATATTky

RMAATATATTKY

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor rmAATATATTky

Arid5a MA0602.2 D 8 0.6667 0.702 0.468 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 51 (7.63%)
Max nb of predicted sites per peak: 4
(Chr6S:22954645-22955045)
Mean nb of predicted sites per peak: 2.18

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Word significance table
Word comparisons		[tab] [html] [heatmap]
Comparisons between discovered motifs
Discovered motifs versus discovered motifs		[ Discovered motif(s): tf ] [ table: html txt ] [ alignments (logo): html text ] [ clustering: html ] [ graph: gml (for CytoScape) ]
Discovered motifs versus transcription factor databases
Motifs versus JASPAR2024_CORE_vertebrates_non-redundant database		[ table: html txt ] [ alignments (logo): html text ] [ graph: gml (for CytoScape) ]

Log files
Parameters and files		[txt] [html]
Time log		[time table] [time log] [html]

RSAT - peak-motifs result

Analysis: overlapped_peak (01/07/2025 11:08)

Command

Sequence composition

Discovered motifs (by algorithm)

Discovered motifs (with motif comparison)

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ATATATATATATATATATATATAT

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mdawatAaAtAaAaaAtataTtry

FOXD3 MA0041.3 D 14 0.5833 0.769 0.449 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor vwwwwTAaAAAtAtAAaAttmw

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor rmAATATATTky

Arid5a MA0602.2 D 8 0.6667 0.702 0.468 NA NA

Total matches= 1

Motif locations (sites)

Motif comparisons

Logs and parameter files

Publications

Results

RSAT - peak-motifs result

Analysis: overlapped_peak (01/07/2025 11:08)

Command

Sequence composition

Discovered motifs (by algorithm)

Discovered motifs (with motif comparison)

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor ATATATATATATATATATATATAT Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor mdawatAaAtAaAaaAtataTtry FOXD3 MA0041.3 D 14 0.5833 0.769 0.449 NA NA Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor vwwwwTAaAAAtAtAAaAttmw Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor rmAATATATTky Arid5a MA0602.2 D 8 0.6667 0.702 0.468 NA NA Total matches= 1

Motif locations (sites)

Motif comparisons

Logs and parameter files

Publications

Results

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ATATATATATATATATATATATAT

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mdawatAaAtAaAaaAtataTtry

FOXD3 MA0041.3 D 14 0.5833 0.769 0.449 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor vwwwwTAaAAAtAtAAaAttmw

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor rmAATATATTky

Arid5a MA0602.2 D 8 0.6667 0.702 0.468 NA NA

Total matches= 1