; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/07/09/oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/07/09/oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/07/09/oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/07/09/oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/07/09/oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	16	14	10	4	36	35	9	5	52	51	6	44	47	42	22	12
c	4	11	4	5	11	4	6	1	0	0	3	0	1	1	4	9
g	15	11	8	27	3	5	7	45	0	1	5	7	0	8	10	12
t	17	16	30	16	2	8	30	1	0	0	38	1	4	1	16	19
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m1_rc.png
;
a	18	25	78	78	0	2	10	86	82	10	28	28
c	12	22	3	3	2	0	2	0	3	3	19	20
g	29	20	4	3	0	79	71	1	1	8	23	13
t	30	22	4	5	87	8	6	2	3	68	19	28
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m2_rc.png
;
a	2	10	1	1	16	0	15	1	1	13	12	1	1	3	3
c	4	1	2	0	0	13	0	1	13	0	2	2	1	6	1
g	6	1	0	3	0	2	0	14	0	0	0	1	11	2	4
t	4	4	13	12	0	1	1	0	2	3	2	12	3	5	8
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m3_rc.png
;
a	208	223	400	397	390	399	408	402	134	195	161
c	66	65	17	12	12	18	11	8	235	69	86
g	75	67	1	9	10	6	5	9	30	62	81
t	83	77	14	14	20	9	8	13	33	106	104
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m4_rc.png
;
a	30	26	46	16	64	7	21	77	92	8	85	85	87	34	35
c	13	33	11	8	8	8	50	7	1	3	3	2	2	16	19
g	18	15	13	9	5	9	7	4	1	3	4	2	1	20	16
t	34	21	25	62	18	71	17	7	1	81	3	6	5	25	25
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m5_rc.png
;
a	29	36	85	92	3	4	11	92	89	87	39	34
c	18	24	4	3	5	4	73	3	1	6	16	23
g	15	13	4	0	3	84	10	1	4	2	14	13
t	35	24	4	2	86	5	3	1	3	2	28	27
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m6_rc.png
;
a	36	47	135	7	6	11	6	6	11	55	49
c	40	32	6	4	1	125	3	4	5	27	25
g	32	35	10	2	6	6	3	148	9	32	45
t	60	54	17	155	155	26	156	10	143	54	49
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m7_rc.png
;
a	13	10	4	3	29	31	2	6	33	35	5	28	30	7	11	11
c	7	6	2	2	4	1	4	2	0	0	2	1	3	7	4	8
g	8	12	4	27	1	3	1	27	1	0	0	6	1	12	15	5
t	8	8	26	4	2	1	29	1	2	1	29	1	2	10	6	12
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m8_rc.png
;
a	8	6	2	2	17	20	1	8	20	19	4	21	22	3	17	16	22	8	7
c	5	6	0	2	3	0	3	1	2	0	1	0	0	3	1	2	0	5	6
g	2	6	6	14	1	3	3	12	1	1	2	1	1	4	5	2	0	4	5
t	8	5	15	5	2	0	16	2	0	3	16	1	0	13	0	3	1	6	5
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m9_rc.png
;
a	34	21	75	75	75	75	0	0	17	28
c	12	15	0	0	0	0	0	0	13	17
g	12	15	0	0	0	0	0	75	22	10
t	17	24	0	0	0	0	75	0	23	20
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m10_rc.png
;
a	13	6	0	0	31	0	31	0	11	14
c	6	3	0	31	0	0	0	31	4	3
g	4	13	31	0	0	0	0	0	12	3
t	8	9	0	0	0	31	0	0	4	11
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m11_rc.png
;
a	12	10	0	31	0	0	31	31	8	16
c	5	3	31	0	0	0	0	0	8	7
g	5	7	0	0	31	0	0	0	3	2
t	9	11	0	0	0	31	0	0	12	6
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m12_rc.png
;
a	9	6	0	27	0	0	0	27	9	10
c	3	10	27	0	27	0	0	0	5	7
g	5	4	0	0	0	0	27	0	7	6
t	10	7	0	0	0	27	0	0	6	4
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m13_rc.png
;
a	26	23	44	58	0	2	2	60	9	54	17	17
c	10	14	6	0	0	2	55	0	1	3	6	12
g	4	4	7	0	4	50	2	0	47	1	16	16
t	20	19	3	2	56	6	1	0	3	2	21	15
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m14_rc.png
;
a	24	22	4	68	2	1	5	1	71	7	20	22
c	13	14	64	4	4	3	5	65	0	0	14	15
g	14	21	2	2	2	1	1	4	0	60	13	12
t	24	18	5	1	67	70	64	5	4	8	28	26
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m15_rc.png
;
a	12	8	37	0	0	0	0	37	9	15
c	6	11	0	0	0	37	0	0	6	3
g	8	9	0	0	37	0	0	0	9	10
t	11	9	0	37	0	0	37	0	13	9
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m16_rc.png
;
a	15	12	0	31	0	0	31	0	14	12
c	3	5	31	0	0	0	0	31	5	6
g	2	7	0	0	0	0	0	0	4	8
t	11	7	0	0	31	31	0	0	8	5
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m17_rc.png
;
a	33	28	8	106	1	1	5	7	15	39	28
c	20	37	97	6	2	3	5	98	85	18	19
g	20	18	2	0	0	7	98	5	2	19	26
t	41	31	7	2	111	103	6	4	12	38	41
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m18.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m18_rc.png
;
a	15	9	31	31	0	0	0	0	14	9
c	5	9	0	0	0	0	0	31	3	5
g	5	8	0	0	0	31	31	0	4	9
t	6	5	0	0	31	0	0	0	10	8
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m19.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m19_rc.png
;
a	12	14	41	0	0	0	0	41	16	12
c	5	10	0	0	41	0	0	0	7	8
g	9	9	0	0	0	0	0	0	3	6
t	15	8	0	41	0	41	41	0	15	15
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m20.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/09//oligo-analysis_2025-07-09.030625_EXDsMw_pssm_count_matrices_logo_m20_rc.png
;
; Host name	rsat
; Job started	2025-07-09.030631
; Job done	2025-07-09.030637
; Seconds	0.28
;	user	0.28
;	system	0.15
;	cuser	4.7
;	csystem	0.75