; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/07/10/dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/07/10/dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/07/10/dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/07/10/dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/07/10/dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	216	243	123	553	595	633	606	615	159	567	556	91	202	247
c	101	133	48	42	22	18	17	18	36	38	31	29	129	147
g	101	101	55	43	27	13	19	20	39	39	31	43	147	107
t	267	208	459	47	41	21	43	32	451	41	67	522	207	184
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m1_rc.png
;
a	33	47	17	23	26	14	9	21	4	8	19	9	14	27	20	55	37
c	101	62	175	181	21	202	213	3	197	213	13	196	184	22	54	102	79
g	70	92	20	21	185	14	11	214	23	12	206	26	20	177	145	37	105
t	42	45	34	21	14	16	13	8	22	13	8	15	28	20	27	52	25
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m2_rc.png
;
a	111	131	62	245	251	68	272	277	279	273	264	83	245	248	59	103	129
c	56	47	26	15	16	22	11	12	10	13	14	11	27	11	14	52	56
g	43	48	36	15	17	199	15	9	7	8	14	23	19	19	22	70	47
t	100	84	186	35	26	21	12	12	14	16	18	193	19	32	215	85	78
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m3_rc.png
;
a	673	784	1625	1678	1684	1232	1702	1624	1632	279	596	611
c	358	354	72	44	53	50	49	69	49	85	315	374
g	343	309	59	64	56	93	42	55	65	94	408	315
t	472	399	90	60	53	471	53	98	100	1388	527	546
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m4_rc.png
;
a	94	118	202	39	2	287	1	5	0	7	139	83	107
c	58	65	31	16	4	8	2	1	6	2	48	62	43
g	64	37	22	11	7	5	7	6	2	4	46	47	53
t	113	109	74	263	316	29	319	317	321	316	96	137	126
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m5_rc.png
;
a	815	843	483	2034	2084	2075	2096	2089	2018	1021	863
c	395	323	191	89	56	56	66	48	53	330	344
g	418	461	1396	81	83	94	60	55	89	368	448
t	639	640	197	63	44	42	45	75	107	548	612
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m6_rc.png
;
a	47	25	28	25	5	9	18	6	9	13	3	7	98	9	17	28	21	26	40	38
c	56	69	125	27	162	162	17	164	169	10	173	163	23	139	142	21	128	138	48	70
g	63	45	19	130	12	7	150	11	2	160	10	13	56	18	17	125	27	17	70	50
t	29	56	23	13	16	17	10	14	15	12	9	12	18	29	19	21	19	14	37	37
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m7_rc.png
;
a	99	116	200	39	6	295	8	3	3	5	41	78	111
c	56	63	31	16	11	3	1	1	2	4	48	64	50
g	53	45	22	11	2	4	5	4	1	8	142	46	52
t	119	103	74	261	308	25	313	319	321	310	96	139	114
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m8_rc.png
;
a	346	365	152	983	1020	1038	1039	1016	197	468	368
c	197	233	64	46	28	22	24	25	749	167	199
g	174	180	53	37	23	20	13	27	56	174	205
t	386	325	834	37	32	23	27	35	101	294	331
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m9_rc.png
;
a	357	382	165	1019	1060	1079	1074	1031	197	434	395
c	197	226	46	45	37	22	14	24	61	140	211
g	183	198	89	40	27	19	19	28	778	213	190
t	400	331	837	33	13	17	30	54	101	350	341
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m10_rc.png
;
a	220	221	123	585	606	606	588	551	165	539	545	111	213	220
c	118	122	419	31	11	22	29	34	58	37	18	28	112	114
g	106	112	55	19	7	12	15	29	26	38	28	29	136	125
t	216	205	63	25	36	20	28	46	411	46	69	492	199	201
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m11_rc.png
;
a	160	177	485	16	21	524	39	48	53	188	151
c	133	136	41	10	13	20	16	30	30	140	131
g	183	193	37	547	555	19	516	503	480	172	205
t	121	91	34	24	8	34	26	16	34	97	110
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m12_rc.png
;
a	136	121	16	25	18	88	127	101	109	109	109	116	133	126	101	111	101	105	125	114	15	24	19	14	168	111
c	164	194	521	30	517	239	170	215	218	184	211	223	177	191	225	177	200	243	160	199	516	24	524	530	123	193
g	177	132	36	506	27	175	189	155	152	205	157	156	169	154	155	198	150	150	204	149	41	510	29	23	206	164
t	117	147	21	33	32	92	108	123	115	96	117	99	115	123	113	108	143	96	105	132	22	36	22	27	97	126
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m13_rc.png
;
a	230	213	625	19	26	25	23	17	39	562	258	304
c	137	181	26	18	5	8	7	27	30	36	128	124
g	154	126	29	21	18	14	14	24	30	41	154	123
t	241	242	82	704	713	715	718	694	663	123	222	211
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m14_rc.png
;
a	32	66	0	0	0	33	0	0	0	37	42
c	50	41	197	0	197	76	197	0	197	69	52
g	19	28	0	0	0	24	0	0	0	29	61
t	96	62	0	197	0	64	0	197	0	62	42
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m15_rc.png
;
a	36	27	0	0	0	45	43	18	0	0	0	37	38
c	59	60	187	0	187	53	61	59	187	0	187	54	56
g	28	38	0	0	0	34	31	42	0	0	0	32	43
t	64	62	0	187	0	55	52	68	0	187	0	64	50
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m16_rc.png
;
a	41	33	154	0	0	154	0	0	71	42
c	56	72	0	154	154	0	154	154	26	56
g	37	28	0	0	0	0	0	0	34	21
t	20	21	0	0	0	0	0	0	23	35
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m17_rc.png
;
a	47	23	0	123	0	37	46	30	0	123	0	43	35
c	17	44	0	0	123	21	17	40	0	0	123	24	36
g	30	22	123	0	0	35	33	29	123	0	0	23	23
t	29	34	0	0	0	30	27	24	0	0	0	33	29
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m18.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/07/10//dyad-analysis_2025-07-10.121041_3xAvPH_pssm_count_matrices_logo_m18_rc.png
;
; Host name	rsat
; Job started	2025-07-10.121056
; Job done	2025-07-10.121102
; Seconds	0.43
;	user	0.43
;	system	0.21
;	cuser	4.42
;	csystem	0.78