; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/07/12/oligo-analysis_2025-07-12.154640_wPiEEI_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/www-data/2025/07/12/oligo-analysis_2025-07-12.154640_wPiEEI_pssm_count_matrices.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/07/12/oligo-analysis_2025-07-12.154640_wPiEEI_pssm_count_matrices.tf
; Input format transfac
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/07/12/oligo-analysis_2025-07-12.154640_wPiEEI_pssm_count_matrices.txt
; Output format tab
; pseudo-weight 1
a 3 1 0 0 0 11 0 11 1 0 1 2
c 1 1 11 8 0 0 0 0 0 1 0 0
g 7 6 0 0 10 0 11 0 9 1 8 2
t 0 3 0 3 1 0 0 0 1 9 2 7
//
a 14 14 40 38 4 39 1 1 3 12 15
c 10 5 0 0 31 1 39 1 31 10 10
g 2 3 1 2 2 0 0 0 3 3 3
t 15 19 0 1 4 1 1 39 4 16 13
//
; Host name rsat
; Job started 2025-07-12.154645
; Job done 2025-07-12.154645
; Seconds 0.12
; user 0.12
; system 0
; cuser 0
; csystem 0