; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/08/04/oligo-analysis_2025-08-04.233640_UQkDYK_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/www-data/2025/08/04/oligo-analysis_2025-08-04.233640_UQkDYK_pssm_count_matrices.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/08/04/oligo-analysis_2025-08-04.233640_UQkDYK_pssm_count_matrices.tf
; Input format transfac
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/08/04/oligo-analysis_2025-08-04.233640_UQkDYK_pssm_count_matrices.txt
; Output format tab
; pseudo-weight 1
a 7 5 3 16 0 1 0 16 0 12 5 0
c 5 4 1 0 0 15 0 0 0 0 2 4
g 4 2 0 0 0 0 15 0 0 1 4 5
t 0 5 12 0 16 0 1 0 16 3 5 7
//
a 15 15 1 46 2 0 1 4 42 20 11
c 4 5 5 0 1 2 1 2 3 5 6
g 8 12 1 2 1 3 1 1 2 4 9
t 24 19 44 3 47 46 48 44 4 22 25
//
a 3 3 1 1 0 1 6 0 0 0 2 0
c 1 2 2 6 0 6 0 0 0 7 2 2
g 1 1 0 0 7 0 0 7 7 0 1 3
t 2 1 4 0 0 0 1 0 0 0 2 2
//
; Host name rsat
; Job started 2025-08-04.233646
; Job done 2025-08-04.233646
; Seconds 0.12
; user 0.12
; system 0
; cuser 0
; csystem 0