; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/08/05/oligo-analysis_2025-08-05.213541_RIpvxp_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/08/05/oligo-analysis_2025-08-05.213541_RIpvxp_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/08/05/oligo-analysis_2025-08-05.213541_RIpvxp_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/08/05/oligo-analysis_2025-08-05.213541_RIpvxp_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/08/05/oligo-analysis_2025-08-05.213541_RIpvxp_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	7	5	3	16	0	1	0	16	0	12	5	0
c	5	4	1	0	0	15	0	0	0	0	2	4
g	4	2	0	0	0	0	15	0	0	1	4	5
t	0	5	12	0	16	0	1	0	16	3	5	7
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/05//oligo-analysis_2025-08-05.213541_RIpvxp_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/05//oligo-analysis_2025-08-05.213541_RIpvxp_pssm_count_matrices_logo_m1_rc.png
;
a	15	15	1	46	2	0	1	4	42	20	11
c	4	5	5	0	1	2	1	2	3	5	6
g	8	12	1	2	1	3	1	1	2	4	9
t	24	19	44	3	47	46	48	44	4	22	25
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/05//oligo-analysis_2025-08-05.213541_RIpvxp_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/05//oligo-analysis_2025-08-05.213541_RIpvxp_pssm_count_matrices_logo_m2_rc.png
;
a	3	3	1	1	0	1	6	0	0	0	2	0
c	1	2	2	6	0	6	0	0	0	7	2	2
g	1	1	0	0	7	0	0	7	7	0	1	3
t	2	1	4	0	0	0	1	0	0	0	2	2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/05//oligo-analysis_2025-08-05.213541_RIpvxp_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/05//oligo-analysis_2025-08-05.213541_RIpvxp_pssm_count_matrices_logo_m3_rc.png
;
; Host name	rsat
; Job started	2025-08-05.213546
; Job done	2025-08-05.213547
; Seconds	0.13
;	user	0.14
;	system	0.02
;	cuser	0.73
;	csystem	0.1