; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/08/14/dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/08/14/dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/08/14/dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_links.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/08/14/dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices.tf
; Input format tf
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/08/14/dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_links.txt
; Output format tab
; pseudo-weight 1
a 191 150 669 18 43 10 454 16 37 10 688 137 187
c 195 349 34 717 25 737 7 708 24 734 34 332 213
g 285 182 61 23 725 22 331 18 725 28 57 164 267
t 129 119 36 42 7 31 8 58 14 28 21 167 133
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m1_rc.png
;
a 5 14 5 7 5 3 34 2 6 0 7 0 27 2 2 1 8 3 10 5 1 7 6 7 7 12
c 21 20 38 4 39 50 6 49 3 45 6 55 7 50 3 48 8 50 3 15 5 11 46 14 16 25
g 22 19 10 43 9 2 14 1 48 6 45 4 20 4 52 6 41 5 44 6 49 33 3 32 22 8
t 11 6 6 5 6 4 5 7 2 8 1 0 5 3 2 4 2 1 2 33 4 8 4 6 14 14
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m2_rc.png
;
a 230 316 64 979 42 61 51 992 31 92 79 181 192 285
c 398 261 882 54 1052 54 104 71 1072 32 106 91 449 305
g 305 449 91 106 32 1072 71 104 54 1052 54 882 261 398
t 285 192 181 79 92 31 992 51 61 42 979 64 316 230
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m3_rc.png
;
a 55 81 23 194 13 16 26 17 14 16 11 17 13 12 10 33 56 58
c 107 79 229 38 264 19 83 21 270 31 282 27 280 16 259 197 115 93
g 87 106 32 62 15 263 28 269 14 252 10 260 10 270 23 54 74 106
t 65 48 30 20 22 16 177 7 16 15 11 10 11 16 22 30 69 57
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m4_rc.png
;
a 129 181 0 0 0 194 142 152 134 157 139 150 0 748 0 139 132
c 303 225 748 0 748 227 310 258 330 264 293 275 748 0 748 247 276
g 198 189 0 748 0 195 161 231 162 193 172 192 0 0 0 235 169
t 118 153 0 0 0 132 135 107 122 134 144 131 0 0 0 127 171
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m5_rc.png
;
a 1000 1064 206 250 133 1035 1056 141 234 164 345 1184 1014
c 2007 1965 5021 331 5221 1922 1920 4708 272 4988 4503 1606 2175
g 1748 1583 279 4888 181 1884 1489 709 4950 354 549 1885 1420
t 964 1107 213 250 184 878 1254 161 263 213 322 1044 1110
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m6_rc.png
;
a 894 819 205 178 151 246 154 146 187 1153 910
c 1666 1646 276 4264 4409 244 269 4422 4106 1260 1499
g 1314 1558 4237 272 171 4208 4247 198 436 1616 1607
t 1032 883 188 192 175 208 236 140 177 877 890
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m7_rc.png
;
a 254 255 0 1046 0 274 250 0 1046 0 307 240
c 313 331 1046 0 1046 338 334 1046 0 1046 345 331
g 242 270 0 0 0 239 254 0 0 0 213 248
t 237 190 0 0 0 195 208 0 0 0 181 227
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m8_rc.png
;
a 1 2 0 2 0 0 0 1 0 0 2 0 1 0 0 0 1 1 0 0 2 1 1 2 0 1 1 1 2 0 0 0 0 0 1 2
c 2 1 4 2 6 0 2 2 6 0 1 1 4 2 6 1 4 5 0 5 0 4 3 3 0 4 0 4 0 1 1 0 3 5 2 3
g 0 3 1 2 0 6 1 2 0 6 1 5 1 4 0 5 1 0 6 0 3 1 1 1 5 0 4 1 4 2 4 6 2 1 1 1
t 3 0 1 0 0 0 3 1 0 0 2 0 0 0 0 0 0 0 0 1 1 0 1 0 1 1 1 0 0 3 1 0 1 0 2 0
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m9_rc.png
;
a 279 153 0 0 764 114 0 0 764 140 146
c 173 176 764 0 0 165 764 0 0 174 295
g 206 207 0 764 0 177 0 764 0 239 200
t 106 228 0 0 0 308 0 0 0 211 123
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m10_rc.png
;
a 307 315 89 78 70 37 61 35 57 35 325 313
c 651 605 1434 1631 77 1739 112 1738 90 1706 556 711
g 571 639 272 110 1657 43 1622 50 1680 62 676 521
t 337 307 71 47 62 47 71 43 39 63 309 321
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m11_rc.png
;
a 150 157 0 702 0 142 124 136 161 0 0 0 157 149
c 215 255 702 0 702 239 248 257 209 702 0 702 248 223
g 185 159 0 0 0 214 172 221 169 0 702 0 191 176
t 152 131 0 0 0 107 158 88 163 0 0 0 106 154
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m12_rc.png
;
a 419 350 1528 51 58 73 896 45 56 62 446 355
c 500 676 96 1676 41 1584 25 1673 90 200 596 612
g 661 574 192 71 1745 134 933 56 1669 1541 491 522
t 293 273 57 75 29 82 19 99 58 70 340 384
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m13_rc.png
;
a 229 211 996 0 0 218 996 0 0 252 387
c 381 248 0 0 996 239 0 0 996 219 208
g 250 274 0 996 0 210 0 996 0 229 233
t 136 263 0 0 0 329 0 0 0 296 168
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m14_rc.png
;
a 168 178 0 0 0 152 172 196 199 194 206 170 223 221 199 191 180 171 177 172 159 168 149 136 183 0 0 0 167 169
c 401 332 1040 0 1040 351 382 350 388 361 409 374 367 368 356 359 346 375 325 392 370 387 411 407 332 1040 0 1040 362 369
g 320 338 0 1040 0 381 290 297 291 302 253 298 257 270 301 284 276 287 296 295 303 298 306 327 337 0 1040 0 345 325
t 151 192 0 0 0 156 196 197 162 183 172 198 193 181 184 206 238 207 242 181 208 187 174 170 188 0 0 0 166 177
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m15_rc.png
;
a 715 610 2597 80 229 103 202 103 90 576 753
c 847 1001 133 2694 99 2632 67 207 172 938 786
g 942 928 249 122 2678 121 2740 115 2714 845 910
t 582 547 107 190 80 230 77 2661 110 727 637
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m16_rc.png
;
a 186 185 0 0 0 176 184 173 168 185 188 164 176 192 172 0 0 0 246 181
c 361 378 1109 0 1109 476 337 450 482 351 458 458 408 418 514 0 1109 1109 266 412
g 392 325 0 1109 0 270 397 310 277 389 277 298 339 260 255 1109 0 0 405 296
t 170 221 0 0 0 187 191 176 182 184 186 189 186 239 168 0 0 0 192 220
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m17_rc.png
;
a 152 133 0 699 0 123 146 0 0 0 153 134
c 222 276 699 0 699 254 219 699 0 699 251 248
g 188 162 0 0 0 227 172 0 699 0 166 189
t 137 128 0 0 0 95 162 0 0 0 129 128
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m18.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14//dyad-analysis_2025-08-14.161128_mE5gb0_pssm_count_matrices_logo_m18_rc.png
;
; Host name rsat
; Job started 2025-08-14.161153
; Job done 2025-08-14.161200
; Seconds 0.74
; user 0.74
; system 0.26
; cuser 5.48
; csystem 0.7