peak-motifs UP_1000_

Motif discovery

Motif 1 oligos_6nt_mkv4_m1

k-mer sig=10.23; evalue=5.9e-11

maACCCTAsc

GSTAGGGTTK

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 364 (27.60%)
Max nb of predicted sites per peak: 4
(HORVU.MOREX.r3.7HG0635170)
Mean nb of predicted sites per peak: 1.25

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 2 oligos_6nt_mkv4_m2

k-mer sig=8.79; evalue=1.6e-09

wrCAAAACaa

TTGTTTTGYW

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 595 (45.11%)
Max nb of predicted sites per peak: 8
(HORVU.MOREX.r3.2HG0173660)
Mean nb of predicted sites per peak: 1.46

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 3 oligos_6nt_mkv4_m3

k-mer sig=6.48; evalue=3.3e-07

yyCTTCTCyy

RRGAGAAGRR

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 626 (47.46%)
Max nb of predicted sites per peak: 6
(HORVU.MOREX.r3.2HG0205090)
Mean nb of predicted sites per peak: 1.46

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 4 oligos_6nt_mkv4_m4

k-mer sig=6.43; evalue=3.7e-07

dgGTGGAGTAgd

HCTACTCCACCH

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 420 (31.84%)
Max nb of predicted sites per peak: 4
(HORVU.MOREX.r3.7HG0640130)
Mean nb of predicted sites per peak: 1.28

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 5 oligos_6nt_mkv4_m5

k-mer sig=5.43; evalue=3.7e-06

rrAAGGAArr

YYTTCCTTYY

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 661 (50.11%)
Max nb of predicted sites per peak: 7
(HORVU.MOREX.r3.4HG0355210)
Mean nb of predicted sites per peak: 1.49

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 6 positions_6nt_m1

k-mer sig=300; evalue=1e-300

rtmkmTATATAkmkat

ATMKMTATATAKMKAY

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 449 (34.04%)
Max nb of predicted sites per peak: 60
(HORVU.MOREX.r3.3HG0295060)
Mean nb of predicted sites per peak: 4.52

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 7 positions_6nt_m2

k-mer sig=47.88; evalue=1.3e-48

ytbGCTATAAAwa

TWTTTATAGCVAR

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 409 (31.01%)
Max nb of predicted sites per peak: 4
(HORVU.MOREX.r3.1HG0073550)
Mean nb of predicted sites per peak: 1.19

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 8 positions_6nt_m3

k-mer sig=40.31; evalue=4.9e-41

wwaTTAAAAAATATgww

WWCATATTTTTTAATWW

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 577 (43.75%)
Max nb of predicted sites per peak: 13
(HORVU.MOREX.r3.5HG0526600)
Mean nb of predicted sites per peak: 2.09

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 9 positions_6nt_m4

k-mer sig=47.88; evalue=1.3e-48

ysCCTATAAAwa

TWTTTATAGGSR

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 380 (28.81%)
Max nb of predicted sites per peak: 4
(HORVU.MOREX.r3.5HG0482060)
Mean nb of predicted sites per peak: 1.15

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 10 positions_6nt_m5

k-mer sig=27.92; evalue=1.2e-28

ccyCCCCyCCCCCsCCCcc

GGGGGSGGGGGRGGGGRGG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 546 (41.39%)
Max nb of predicted sites per peak: 65
(HORVU.MOREX.r3.1HG0080900)
Mean nb of predicted sites per peak: 7.33

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 11 oligos_7nt_mkv5_m1

k-mer sig=6.92; evalue=1.2e-07

wwAATATAAdw

WHTTATATTWW

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 419 (31.77%)
Max nb of predicted sites per peak: 5
(HORVU.MOREX.r3.6HG0630670)
Mean nb of predicted sites per peak: 1.54

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 12 oligos_7nt_mkv5_m2

k-mer sig=4.97; evalue=1.1e-05

yyCTTCTTCyy

RRGAAGAAGRR

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 344 (26.08%)
Max nb of predicted sites per peak: 6
(HORVU.MOREX.r3.7HG0726510)
Mean nb of predicted sites per peak: 1.45

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 13 oligos_7nt_mkv5_m3

k-mer sig=4.84; evalue=1.4e-05

cwACTCCTAct

AGTAGGAGTWG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 228 (17.29%)
Max nb of predicted sites per peak: 31
(HORVU.MOREX.r3.3HG0302300)
Mean nb of predicted sites per peak: 1.45

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 14 oligos_7nt_mkv5_m4

k-mer sig=4.19; evalue=6.5e-05

cyACTCCCTCcs

SGGAGGGAGTRG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 566 (42.91%)
Max nb of predicted sites per peak: 10
(HORVU.MOREX.r3.2HG0185070)
Mean nb of predicted sites per peak: 1.71

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 15 oligos_7nt_mkv5_m5

k-mer sig=3.78; evalue=0.00017

yyCTTCCTCyy

RRGAGGAAGRR

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 582 (44.12%)
Max nb of predicted sites per peak: 13
(HORVU.MOREX.r3.1HG0080860)
Mean nb of predicted sites per peak: 1.82

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 16 positions_7nt_m1

k-mer sig=300; evalue=1e-300

vtgkCTATATAGmcrb

VYGKCTATATAGMCAB

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 377 (28.58%)
Max nb of predicted sites per peak: 58
(HORVU.MOREX.r3.3HG0295060)
Mean nb of predicted sites per peak: 3.76

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 17 positions_7nt_m2

k-mer sig=300; evalue=1e-300

wtgcCTATAAAtakrw

WYMTATTTATAGGCAW

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 539 (40.86%)
Max nb of predicted sites per peak: 50
(HORVU.MOREX.r3.3HG0295060)
Mean nb of predicted sites per peak: 1.85

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 18 positions_7nt_m3

k-mer sig=300; evalue=1e-300

atrkmTATATATAkmyrt

AYRKMTATATATAKMYAT

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 420 (31.84%)
Max nb of predicted sites per peak: 61
(HORVU.MOREX.r3.3HG0295060)
Mean nb of predicted sites per peak: 4.65

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 19 positions_7nt_m4

k-mer sig=300; evalue=1e-300

atgkCTATATAwat

ATWTATATAGMCAT

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 503 (38.13%)
Max nb of predicted sites per peak: 53
(HORVU.MOREX.r3.3HG0295060)
Mean nb of predicted sites per peak: 2.86

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 20 positions_7nt_m5

k-mer sig=300; evalue=1e-300

tryrTATATAGmcat

ATGKCTATATAYRYA

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 526 (39.88%)
Max nb of predicted sites per peak: 55
(HORVU.MOREX.r3.3HG0295060)
Mean nb of predicted sites per peak: 3.34

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Word significance table
Word comparisons		[tab] [html] [heatmap]
Comparisons between discovered motifs
Discovered motifs versus discovered motifs		[ Discovered motif(s): tf ] [ table: html txt ] [ alignments (logo): html text ] [ clustering: html ] [ graph: gml (for CytoScape) ]

Log files
Parameters and files		[txt] [html]
Time log		[time table] [time log] [html]

RSAT - peak-motifs result

Analysis: UP_1000__peak-motifs (14/08/2025 17:45)

Command

Sequence composition

Discovered motifs (by algorithm)

Discovered motifs (with motif comparison)

Motif locations (sites)

Motif comparisons

Logs and parameter files

Publications

Results