RSAT - position-analysis result

Analysis: result (14/08/2025 16:20)

Command: position-analysis -i $RSAT/public_html/tmp/www-data/2025/08/14/retrieve-seq_2025-08-14.161845_1GRfpB.fasta.fasta.purged -v 1 -sort -nofilter -lth_occ 1 -lth_sig 0 -max_asmb_per_cluster 5 -return chi,sig,rank,distrib,matrices,index -1str -noov -l 6 -ci 20 -origin start -o $RSAT/public_html/tmp/www-data/2025/08/14/position-analysis_2025-08-14.162028_dBWQUX/position-analysis.tab

Input files

Type	File
sequences	../retrieve-seq_2025-08-14.161845_1GRfpB.fasta.fasta.purged

Output files

Type	File
output	position-analysis.tab
assembly	position-analysis_pssm.asmb
sig_matrices	position-analysis_pssm_sig_matrices.tf
count_matrices	position-analysis_pssm_count_matrices.tf

Graph files

Type	File	Image
logo_m1	position-analysis_pssm_count_matrices_logo_m1.png
logo_m2	position-analysis_pssm_count_matrices_logo_m2.png

Directories

Type	Directory
output	.