; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/08/14/position-analysis_2025-08-14.162028_dBWQUX/position-analysis_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/08/14/position-analysis_2025-08-14.162028_dBWQUX/position-analysis_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/08/14/position-analysis_2025-08-14.162028_dBWQUX/position-analysis_pssm_count_matrices_links.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/08/14/position-analysis_2025-08-14.162028_dBWQUX/position-analysis_pssm_count_matrices.tf
; Input format tf
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/08/14/position-analysis_2025-08-14.162028_dBWQUX/position-analysis_pssm_count_matrices_links.txt
; Output format tab
; pseudo-weight 1
a 1021 1410 583 743 131 4020 188 3991 1753 4065 464 2683 1101 1540
c 1015 872 600 3014 119 104 94 104 25 45 208 438 915 795
g 774 902 458 214 56 57 119 96 31 74 1974 560 861 918
t 1479 1105 2648 318 3983 108 3888 98 2480 105 1643 608 1412 1036
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14/position-analysis_2025-08-14.162028_dBWQUX//position-analysis_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14/position-analysis_2025-08-14.162028_dBWQUX//position-analysis_pssm_count_matrices_logo_m1_rc.png
;
a 553 543 368 329 458 326 40 93 59 62 633 55 60 134 105 254 427 463 472
c 1661 1667 2263 2433 1640 1622 3243 3074 3278 3326 1059 3277 3234 2963 3139 2669 1522 1887 1826
g 627 581 428 341 402 392 93 131 43 54 673 57 84 145 122 296 464 486 573
t 674 724 456 412 1015 1175 139 217 135 73 1150 126 137 273 149 296 1102 679 644
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14/position-analysis_2025-08-14.162028_dBWQUX//position-analysis_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/14/position-analysis_2025-08-14.162028_dBWQUX//position-analysis_pssm_count_matrices_logo_m2_rc.png
;
; Host name rsat
; Job started 2025-08-14.162134
; Job done 2025-08-14.162135
; Seconds 0.22
; user 0.23
; system 0.05
; cuser 0.85
; csystem 0.08