; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/08/15/position-analysis_2025-08-15.080246_Dg3SQ2/position-analysis_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/08/15/position-analysis_2025-08-15.080246_Dg3SQ2/position-analysis_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/08/15/position-analysis_2025-08-15.080246_Dg3SQ2/position-analysis_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/08/15/position-analysis_2025-08-15.080246_Dg3SQ2/position-analysis_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/08/15/position-analysis_2025-08-15.080246_Dg3SQ2/position-analysis_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	176	178	0	0	0	0	0	0	0	216	197
c	492	435	1213	1213	0	770	696	1213	1213	378	446
g	195	272	0	0	0	0	517	0	0	274	245
t	350	328	0	0	1213	443	0	0	0	345	325
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/15/position-analysis_2025-08-15.080246_Dg3SQ2//position-analysis_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/15/position-analysis_2025-08-15.080246_Dg3SQ2//position-analysis_pssm_count_matrices_logo_m1_rc.png
;
a	112	166	116	238	11	82	5	516	18	509	131	521	42	51	134	171
c	119	116	118	98	206	207	11	5	5	8	3	3	18	24	144	97
g	125	132	105	102	16	19	5	3	10	9	11	7	315	423	125	140
t	181	123	198	99	304	229	516	13	504	11	392	6	162	39	134	129
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/15/position-analysis_2025-08-15.080246_Dg3SQ2//position-analysis_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/15/position-analysis_2025-08-15.080246_Dg3SQ2//position-analysis_pssm_count_matrices_logo_m2_rc.png
;
a	73	74	47	47	37	13	22	11	15	26	13	13	11	21	12	52	12	18	20	13	19	45	26	10	30	41	31	26	57	60
c	246	261	350	347	355	437	246	448	467	222	448	475	433	406	396	298	460	438	282	443	432	387	276	443	401	212	390	390	262	261
g	79	73	40	40	38	17	31	10	19	24	5	10	22	20	23	76	14	16	29	19	23	24	35	23	41	61	35	46	96	74
t	124	114	85	88	92	55	223	53	21	250	56	24	56	75	91	96	36	50	191	47	48	66	185	46	50	208	66	60	107	127
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/15/position-analysis_2025-08-15.080246_Dg3SQ2//position-analysis_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/15/position-analysis_2025-08-15.080246_Dg3SQ2//position-analysis_pssm_count_matrices_logo_m3_rc.png
;
; Host name	rsat
; Job started	2025-08-15.080317
; Job done	2025-08-15.080318
; Seconds	0.17
;	user	0.17
;	system	0.03
;	cuser	0.83
;	csystem	0.11