; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121427_2025-08-17.121427_PAZ7BE/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121427_2025-08-17.121427_PAZ7BE/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121427_2025-08-17.121427_PAZ7BE/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121427_2025-08-17.121427_PAZ7BE/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	10	12	7	1	46	0	0	4	0	3	12	11
c	17	11	8	51	2	52	0	0	0	34	17	14
g	14	17	34	0	0	0	52	2	51	8	11	17
t	11	12	3	0	4	0	0	46	1	7	12	10
//
; Sites	52
>site_0
TGGCACGTGGCG
>site_1
CGCCACGTGCCA
>site_2
GGGCACGTGGGG
>site_3
CCCCACGTGCCC
>site_4
GGGCACGGGCTT
>site_5
AAGCCCGTGCCC
>site_6
TAGCACGTGCGG
>site_7
CCGCACGTGCTA
>site_8
AAGCACGTGACA
>site_9
TGTCACGTGCTT
>site_10
ACACACGTGCTG
>site_11
CAGCACGTGTGT
>site_12
TCGCACGAGCTC
>site_13
GAGCTCGTGCGA
>site_14
CGACACGTGCCG
>site_15
CGGCACGTGTCG
>site_16
CACCACGTGCAG
>site_17
CTGCACGTGGTG
>site_18
CAGCACGAGCAG
>site_19
CTGCTCGTGCTG
>site_20
CGACACGTGCCG
>site_21
CGGCACGTGTCG
>site_22
GCGCACGTGATG
>site_23
CATCACGTGCGC
>site_24
GAGCACGGGCGT
>site_25
ACGCCCGTGCTC
>site_26
CGGCACGTGTAA
>site_27
TTACACGTGCCG
>site_28
GGTCACGTGCAA
>site_29
TTGCACGTGACC
>site_30
GTCCACGTGCTT
>site_31
AAGCACGTGGAC
>site_32
ACCCACGTGCAC
>site_33
GTGCACGTGGGT
>site_34
TTGCTCGTGCGC
>site_35
GCGCACGAGCAA
>site_36
TTGCACGTGTCA
>site_37
TGACACGTGCAA
>site_38
ACGCACGTGTGG
>site_39
CCACACGTGCGT
>site_40
ACGCACGTGGTC
>site_41
GACCACGTGCGT
>site_42
AAGCACGTGGAC
>site_43
GTCCACGTGCTT
>site_44
ATGAACGTGCAC
>site_45
GTGCACGTTCAT
>site_46
CGGCACGAGCCA
>site_47
TGGCTCGTGCCG
>site_48
TGGCACGTGGCC
>site_49
GGCCACGTGCCA
>site_50
GGACACGTGCAG
>site_51
CTGCACGTGTCC
a	12	11	0	36	1	1	1	2	32	11	6
c	10	5	0	0	36	28	0	1	3	7	9
g	7	12	2	2	1	9	38	0	3	7	11
t	10	11	37	1	1	1	0	36	1	14	13
//
; Sites	39
>site_0
GTTACCGTGGG
>site_1
TTTACCATAGG
>site_2
TTTGCCGTATC
>site_3
TATGCCGTAAA
>site_4
CGTACGGTACC
>site_5
GGTACCGTACG
>site_6
GTTACCGTGCG
>site_7
TCTACCGTATC
>site_8
GATACGGTAGA
>site_9
ACTACCGTCTT
>site_10
ACTAGCGTATT
>site_11
TATACGGTAAA
>site_12
TTTACCGTATA
>site_13
TGTACGGTAAG
>site_14
CTTACCGTACA
>site_15
AGTACCGCAGC
>site_16
CGTACCGTGGG
>site_17
CATACCGTATT
>site_18
AATACGGTATG
>site_19
CATTCCGTACG
>site_20
GGTACCGTTGT
>site_21
TGTAACGTATT
>site_22
CGTACCGTCAC
>site_23
TGTATCGTAAT
>site_24
CAGACCGTATG
>site_25
CATACCGAAAC
>site_26
CTTACGGTAAT
>site_27
ATTACCGTAAG
>site_28
GTTACGGTATT
>site_29
AATACCGTAAC
>site_30
GTTACCGTACA
>site_31
TGTACGGTAAC
>site_32
CATACGGTACT
>site_33
AGTACCGTATG
>site_34
AGGACCGTAAC
>site_35
ATTACCGAATT
>site_36
ACTACTGTATT
>site_37
AATACAGTAGT
>site_38
ACTACCGTCTT
a	9	14	3	0	0	0	4	0	42	5	13	10	6
c	16	9	4	39	1	1	2	43	1	4	12	12	13
g	11	9	35	3	0	41	2	0	0	33	8	7	11
t	7	11	1	1	42	1	35	0	0	1	10	14	13
//
; Sites	43
>site_0
CTGCCGTCAGCCT
>site_1
CCGCTGTCAAATC
>site_2
CAGCTGTCAGTGT
>site_3
CAACTGTCAGTGT
>site_4
CAACTGTCAGCCC
>site_5
GGGCTGACAGTTG
>site_6
AAGCTGTCCGGGT
>site_7
CGGCTGTCATTCG
>site_8
AGGCTGTCAGGCT
>site_9
TTGCTGTCAGATG
>site_10
TAGGTGTCAGAAT
>site_11
GGGTTGTCAGATA
>site_12
CAGCTCTCAGCCT
>site_13
CTCCTGTCAGCAC
>site_14
GTGCTGACAGGAG
>site_15
TTCCTGTCAGAAA
>site_16
GAGCTGACAGACG
>site_17
CGTCTGTCAGCTC
>site_18
AGGGTGTCAGCTG
>site_19
CAGCTGTCAAAAC
>site_20
GGGCTGCCAGAAA
>site_21
GTGCTTTCAGGCG
>site_22
AAGCTGTCACCGA
>site_23
CAGCTGTCACAAA
>site_24
GTCCTGTCAGTTC
>site_25
TGGCTGTCAGTTG
>site_26
TTGCTGTCAGTTG
>site_27
ATGCTGTCACGAC
>site_28
GAGCTGTCACCCA
>site_29
CTGCTGTCAGTAC
>site_30
CCGCTGTCAGATC
>site_31
GCCCTGTCAGGCC
>site_32
CCGCTGTCAAAGC
>site_33
AGGCTGGCAGCAC
>site_34
GTGCTGCCAGCCT
>site_35
ACACTGTCAGGTT
>site_36
ACGCTGACAGCGC
>site_37
GCGCTGTCAGCGT
>site_38
TCGGTGTCAGGTT
>site_39
AAGCTGTCAAATT
>site_40
CAGCTGTCAGACT
>site_41
CAGCTGTCAATTG
>site_42
TCGCTGGCAGTCG
a	7	10	3	0	1	0	3	1	35	1	9	6	4
c	12	9	25	37	1	1	0	37	2	3	9	10	13
g	6	11	9	1	1	37	0	0	0	29	6	12	5
t	13	8	1	0	35	0	35	0	1	5	14	10	16
//
; Sites	38
>site_0
CGCCTGTCACTTT
>site_1
TCCCTGTCATTGA
>site_2
CAGCTGTCAGTGT
>site_3
CAACTGTCAGTGT
>site_4
CACCTGTCATCTT
>site_5
CAACTGTCAGCCC
>site_6
TCCCTGTCCGTCC
>site_7
TACCAGTCAGTGG
>site_8
TTCCCGTCAGCAT
>site_9
AGGCTGTCAGGCT
>site_10
AGCCTGACAGCCT
>site_11
TTGCTGTCAGATG
>site_12
TGCCTCTCAGCGT
>site_13
TACCTGTCATAGG
>site_14
CTCCTGTCAGCAC
>site_15
TTCCTGTCAGAAA
>site_16
CGTCTGTCAGCTC
>site_17
GTCCTGTCAGTTC
>site_18
TGGCTGTCAGTTG
>site_19
TTGCTGTCAGTTG
>site_20
CTGCTGTCAGTAC
>site_21
ACCCTGTCCGTGC
>site_22
CCGCTGTCAGATC
>site_23
GCCCTGTCAGGCC
>site_24
GGCCTGACAGGGC
>site_25
GGCCTGTCACAAT
>site_26
GTCCTGTCATACC
>site_27
AGCCTGTCACGGA
>site_28
CCCCTGTCAACTC
>site_29
TGCCGGTCAGACT
>site_30
ACCGTGTCAGAGC
>site_31
TGCCTGTCATGCA
>site_32
ACACTGTCAGGTT
>site_33
AACCTGACAGTGT
>site_34
GCGCTGTCAGCGT
>site_35
TACCTGTAAGTAT
>site_36
CACCTGTCTGTCT
>site_37
CAGCTGTCAGACT
a	5	7	2	0	19	0	0	16	0	0	5	3
c	6	3	14	19	0	19	1	1	0	4	5	7
g	6	6	3	0	0	0	18	2	19	14	3	3
t	2	3	0	0	0	0	0	0	0	1	6	6
//
; Sites	19
>site_0
CCCCACGAGCCA
>site_1
CTCCACGAGCCC
>site_2
CACCACGAGGAT
>site_3
AGCCACCAGGGT
>site_4
AACCACGAGTTT
>site_5
TGGCACGAGGGG
>site_6
GGCCACGAGCTG
>site_7
TTGCACGAGGTC
>site_8
CAACACGAGGAG
>site_9
GACCACGAGGAT
>site_10
ACGCACGAGGTC
>site_11
CTCCACGAGGCA
>site_12
ACCCACGGGGAT
>site_13
GGCCACGAGGGC
>site_14
CGCCACGCGGCC
>site_15
AGACACGAGGAA
>site_16
GACCACGAGCCT
>site_17
GACCACGGGGTC
>site_18
GACCACGAGGTC
; Host name	rsat
; Job started	2025-08-17.121439
; Job done	2025-08-17.121439
; Seconds	0.14
;	user	0.14
;	system	0.01
;	cuser	0
;	csystem	0
