; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	15	10	4	0	49	0	2	3	0	3	15	9
c	18	12	10	54	2	51	1	0	0	37	17	12
g	12	17	37	0	0	1	51	2	54	10	12	18
t	9	15	3	0	3	2	0	49	0	4	10	15
//
; Sites	54
>site_0
TGGCACGTGGCG
>site_1
CGCCACGTGCCA
>site_2
GGGCACGTGGGG
>site_3
CCCCACGTGCCC
>site_4
AACCACGTGCCT
>site_5
AGGCACGTGGTT
>site_6
ATGCCCGTGCCT
>site_7
AGGCACGGGCAT
>site_8
CAACACGTGCCT
>site_9
AGGCACGTGTTG
>site_10
TGGCACGTGGGG
>site_11
CCCCACGTGCCA
>site_12
CACCACGTGCAG
>site_13
CTGCACGTGGTG
>site_14
CAGCACGAGCAG
>site_15
CTGCTCGTGCTG
>site_16
AGACACGTGCTG
>site_17
CAGCACGTGTCT
>site_18
CGACACGTGCCG
>site_19
CGGCACGTGTCG
>site_20
GCGCACGTGATG
>site_21
CATCACGTGCGC
>site_22
CGGCACGTGTAA
>site_23
TTACACGTGCCG
>site_24
GGTCACGTGCAA
>site_25
TTGCACGTGACC
>site_26
GTCCACGTGCTT
>site_27
AAGCACGTGGAC
>site_28
ACCCACGTGCAC
>site_29
GTGCACGTGGGT
>site_30
TTGCTCGTGCGC
>site_31
GCGCACGAGCAA
>site_32
AGTCACGTGCTG
>site_33
CAGCACGTGACT
>site_34
CCGCACGTGCCA
>site_35
TGGCACGTGCGG
>site_36
ACGCACGTGGTC
>site_37
GACCACGTGCGT
>site_38
CCGCACATGCTC
>site_39
GAGCATGTGCGG
>site_40
ACCCACGTGCCC
>site_41
GGGCACGTGGGT
>site_42
TGGCACCTGCGC
>site_43
GCGCAGGTGCCA
>site_44
CTCCACGTGCAT
>site_45
ATGCACGTGGAG
>site_46
CTGCACGAGCAT
>site_47
ATGCTCGTGCAG
>site_48
GTGCACATGCAA
>site_49
TTGCATGTGCAC
>site_50
ATGCCCGTGCCT
>site_51
AGGCACGGGCAT
>site_52
TCGCACGTGCGC
>site_53
GCGCACGTGCGA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m1_rc.png
;
a	15	21	19	1	2	2	3	1	62	9	18	14
c	20	11	22	64	2	2	4	66	1	9	14	18
g	22	23	20	1	2	64	1	0	0	46	14	18
t	11	13	7	2	62	0	60	1	5	4	22	18
//
; Sites	68
>site_0
GACCTGTCAGAA
>site_1
CGCCTGTCACTT
>site_2
CTCCTGTCACTC
>site_3
GTACAGTCAGCC
>site_4
CAGCTGTCAGTG
>site_5
GACCTGTAAGCG
>site_6
CAACTGTCAGTG
>site_7
CGCCTGTCACTT
>site_8
CGACTGCCAGCG
>site_9
AAACTCTCAGGT
>site_10
CGGCTGTCATTC
>site_11
TACCAGTCAGTG
>site_12
GGCCTGACAGGT
>site_13
AACCTGTCAGGC
>site_14
ACCCTGTCATCT
>site_15
AGGCTGTCAGGC
>site_16
TTGCTGTCAGAT
>site_17
GACCTGTCAGAG
>site_18
GACCTGTCATGC
>site_19
TAGGTGTCAGAA
>site_20
GGGTTGTCAGAT
>site_21
CTCCTGTCAGCA
>site_22
TAACTGTCTGTT
>site_23
GGTCTGTCTGTA
>site_24
CAGCTGTCAAAA
>site_25
GGTCTATCAGAT
>site_26
CGACTGTCTGAC
>site_27
CCGCTGTCTGTA
>site_28
AAGCTGTCACCG
>site_29
GGTCTGTCTGTA
>site_30
GTCCTGTCAGTT
>site_31
GAACTGACAGGA
>site_32
TGGCTGTCAGTT
>site_33
TTGCTGTCAGTT
>site_34
ATGCTGTCACGA
>site_35
CGACTGCCAGCG
>site_36
AGGCTGTCAAAT
>site_37
CTGCTGTCAGTA
>site_38
ACCCTGTCCGTG
>site_39
GTACTGCCAGAG
>site_40
TCTCTGGCAGTA
>site_41
TCCCTGTCAGAC
>site_42
CACCTGTCAAAC
>site_43
GCCCTGTCAGGC
>site_44
GGCCTGACAGGG
>site_45
GGGCCGTCAGCG
>site_46
CCGCTGTCAAAG
>site_47
AGCCTGTCACGG
>site_48
GCTCTGTTAGCT
>site_49
CTGCTATCAGTC
>site_50
TCACTGTCACTG
>site_51
TTCCTCTCAGGC
>site_52
GGACTGTCAAAA
>site_53
AGACTGTCAACG
>site_54
GCACCGTCAGGC
>site_55
GATTTGTCAGCG
>site_56
AAAATGTCAGAC
>site_57
GGCCGGTCAGAA
>site_58
ACACTGTCAGGT
>site_59
CGACTGTCAACG
>site_60
ATACTGCCAGCC
>site_61
AGTCTGTCATTT
>site_62
GGACGGTCAGCC
>site_63
AAGCTGTCAAAT
>site_64
TAACTGTCACGA
>site_65
CAGCTGTCAGAC
>site_66
CAGCTGTCAATT
>site_67
CTCCTGTCACTC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m2_rc.png
;
a	11	14	0	3	49	0	1	4	1	3	10	15
c	18	13	4	52	2	53	1	3	0	4	17	14
g	15	17	48	0	0	1	53	1	49	44	15	16
t	11	11	3	0	4	1	0	47	5	4	13	10
//
; Sites	55
>site_0
GGGCCCGTGGGT
>site_1
CAGCACGTTGCT
>site_2
TGGCACGTGGCG
>site_3
CAGCACGAGGAA
>site_4
GGGCACGTGGGG
>site_5
AGGCACGTGGTT
>site_6
TGGCTCGTGGTC
>site_7
CTGCACGTTGGA
>site_8
AGGCACGTGTTG
>site_9
TGGCACGTGGGG
>site_10
CTGCACGTGGTG
>site_11
CAGCACGTGTCT
>site_12
TATCACGTGGAG
>site_13
CGGCACGTGTCG
>site_14
ATGCACGAGGAA
>site_15
GCGCACGTGATG
>site_16
CTGCATGTGGAT
>site_17
TGGCACGGGGAA
>site_18
CGGCACGTGTAA
>site_19
GGGCACGCGGAC
>site_20
CAGCTCGTGGCT
>site_21
TTGCACGTGACC
>site_22
CAGAACGTGGCA
>site_23
CCGCACGTTGCA
>site_24
AAGCACGTGGAC
>site_25
GTGCACGTGGGT
>site_26
GTGCACGCGGTA
>site_27
TTGCCCGTGGCC
>site_28
AGGCAGGTGGAA
>site_29
CAGCACGTAGCG
>site_30
CAGCACGTGACT
>site_31
GAGAACGTGGTC
>site_32
CCGCACGTGCCA
>site_33
TGGCACGTGCGG
>site_34
ACGCACGAGGTC
>site_35
GCTCACGTGGGA
>site_36
ACGCACGTGGTC
>site_37
GGGCACGTGGGT
>site_38
TTGCACCTGGCA
>site_39
GAGCACGTTGCA
>site_40
CAGAACGTGGGC
>site_41
GAGCTCGTGGTG
>site_42
ATGCACGTGGAG
>site_43
GCGCACATGGCG
>site_44
CCGCACGCGGTA
>site_45
CCCCACGTGGCC
>site_46
GGCCACGTGGGG
>site_47
AGGCTCGTGGTC
>site_48
TGGCACGTTGGC
>site_49
CTGCACGAGGCG
>site_50
TCGCACGTGCGC
>site_51
GCGCACGTGCGA
>site_52
AATCACGTGGTG
>site_53
ACCCACGTGGGC
>site_54
GCCCACGTGGGT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m3_rc.png
;
a	17	17	10	1	1	0	2	3	59	35	17	13
c	23	13	25	57	1	2	0	59	2	9	13	16
g	12	20	22	3	1	60	0	1	2	16	17	17
t	12	14	7	3	61	2	62	1	1	4	17	18
//
; Sites	64
>site_0
GACCTGTCAGAA
>site_1
AGCCTCTCAACA
>site_2
CCACGGTCAATC
>site_3
CGGCTGTCGACC
>site_4
GATCTGTGAAAT
>site_5
CGCCTGTCACTT
>site_6
CTCCTGTCACTC
>site_7
CAGCTGTCAGTG
>site_8
TGGCTGACAACC
>site_9
CAACTGTCAGTG
>site_10
CGCCTGTCACTT
>site_11
CGCTTGTCAAGG
>site_12
CGGCTGTCATTC
>site_13
GAGGTGTCAAAA
>site_14
AACCTGTCAGGC
>site_15
TTTCTGTAAAAA
>site_16
ACCCTGTCATCT
>site_17
AGGCTGTCAGGC
>site_18
TTGCTGTCAGAT
>site_19
GACCTGTCAGAG
>site_20
GACCTGTCATGC
>site_21
GGCCTGTAAACC
>site_22
TCGCTCTCAACG
>site_23
CTCCTGTCAGCA
>site_24
TTCATGTCAAGT
>site_25
TACCCGTCAATT
>site_26
CAGCTGTCAAAA
>site_27
CTACTGTCCACG
>site_28
AAGCTGTCACCG
>site_29
GCCGTGTCAATG
>site_30
GTCCTGTCAGTT
>site_31
TGGCTGTCAGTT
>site_32
TTGCTGTCAGTT
>site_33
ATGCTGTCACGA
>site_34
ATTCTGTAAACA
>site_35
AGGCTGTCGAAG
>site_36
CGCTTGTCAAGG
>site_37
AGGCTGTCAAAT
>site_38
CTGCTGTCAGTA
>site_39
TCCCTGTCAGAC
>site_40
CACCTGTCAAAC
>site_41
GCCCTGTCAGGC
>site_42
ATTGTGTCAAGT
>site_43
CCGCTGTCTAGA
>site_44
CCGCTGTCAAAG
>site_45
AGCCTGTCACGG
>site_46
AACCTTTCAAGG
>site_47
TTCCAGTCAAGT
>site_48
TCACTGTCACTG
>site_49
GGACTGTCAAAA
>site_50
AGACTGTCAACG
>site_51
GGCCTTTCAACC
>site_52
GGTCTGTCCAGC
>site_53
ACGCTGACAAAT
>site_54
ACACTGTCAGGT
>site_55
CGACTGTCAACG
>site_56
CCACTGTTAAGA
>site_57
AGTCTGTCATTT
>site_58
CCTTTGTCAAAG
>site_59
AAGCTGTCAAAT
>site_60
TAACTGTCACGA
>site_61
CAGCTGTCAGAC
>site_62
CAGCTGTCAATT
>site_63
CTCCTGTCACTC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m4_rc.png
;
a	6	15	3	0	50	0	0	6	51	2	9	17
c	6	26	3	1	0	11	1	47	0	4	32	14
g	35	7	2	52	1	42	1	1	1	43	7	10
t	7	6	46	1	3	1	52	0	2	5	6	13
//
; Sites	54
>site_0
AGTGAGTGAGAC
>site_1
GCTGAGTAAGCA
>site_2
AGTGAGGCAGCC
>site_3
GATGAGTCTGGG
>site_4
GATGAGTCAGCA
>site_5
GCTGAGTCATCC
>site_6
GATGACTCAGCC
>site_7
GCTGAGTCAGCC
>site_8
GCTGACTCAGCA
>site_9
GCTGACTCAGCC
>site_10
GCTGAGTCAGCA
>site_11
GCTGAGTCATTT
>site_12
AATGACTCAGCA
>site_13
GAAGAGTCACGG
>site_14
GCTGAGTCAGCA
>site_15
GCTGACTCAGCT
>site_16
GATGTGTCAGAT
>site_17
TTTGATTCAGAT
>site_18
GCTGAGTCAGCC
>site_19
GCTGACTCAGCC
>site_20
GATGAGTCAGCG
>site_21
GATGAGTAAGCC
>site_22
GCTGACTCAGCT
>site_23
GCTGAGTCAGCA
>site_24
ATTGAGTCAATC
>site_25
GCTGAGTCGGGA
>site_26
TAAGAGTCATCT
>site_27
CATGGGTCAGAA
>site_28
GCTGAGTAAGCA
>site_29
AATGTGTCAGAC
>site_30
CCGGAGTCACAG
>site_31
GATGAGTAAGCG
>site_32
GCTGAGTCAGCC
>site_33
GCTGACTCAGCT
>site_34
GCTGAGTAAGCA
>site_35
AGTGAGCCAGAA
>site_36
GATGAGTCATTT
>site_37
CTGGAGTCACGT
>site_38
GGCGAGTCAGTT
>site_39
GTTGTGTCAGGT
>site_40
CGTGAGTCAGAC
>site_41
TATCAGTCAGCA
>site_42
GCCGAGTCACGT
>site_43
TCAGAGTCAGTA
>site_44
TGCGAGTCAGCA
>site_45
TGTGAGTCTGTG
>site_46
TTTGACTCAGCT
>site_47
GCTGAGTCAAAG
>site_48
GCTGAGTAAGCG
>site_49
GCTGAGTCATGG
>site_50
CATGACTCAGCG
>site_51
CTTTAGTCAGCA
>site_52
GCTGACTCAGCC
>site_53
GCTGAGTCAGCA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2025-08-17.121457
; Job done	2025-08-17.121459
; Seconds	0.15
;	user	0.15
;	system	0.06
;	cuser	1.11
;	csystem	0.2
