; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	13	15	10	3	0	47	0	2	3	0	3	15	9	14
c	11	16	12	10	52	2	49	1	0	0	36	15	12	14
g	14	12	15	36	0	0	1	49	2	52	10	12	16	11
t	14	9	15	3	0	3	2	0	47	0	3	10	15	13
//
; Sites	52
>site_0
TTGGCACGTGGCGA
>site_1
TCGCCACGTGCCAA
>site_2
TGGGCACGTGGGGA
>site_3
TCCCCACGTGCCCA
>site_4
CAACCACGTGCCTT
>site_5
AAGGCACGTGGTTG
>site_6
AATGCCCGTGCCTT
>site_7
AAGGCACGGGCATT
>site_8
TCAACACGTGCCTT
>site_9
AAGGCACGTGTTGA
>site_10
TTGGCACGTGGGGC
>site_11
GCCCCACGTGCCAA
>site_12
CCACCACGTGCAGA
>site_13
TCTGCACGTGGTGG
>site_14
GCAGCACGAGCAGG
>site_15
CCTGCTCGTGCTGC
>site_16
CAGACACGTGCTGA
>site_17
TCAGCACGTGTCTG
>site_18
AGCGCACGTGATGT
>site_19
ACATCACGTGCGCT
>site_20
GCGGCACGTGTAAC
>site_21
GTTACACGTGCCGC
>site_22
TGGTCACGTGCAAC
>site_23
GTTGCACGTGACCA
>site_24
TGTCCACGTGCTTC
>site_25
GAAGCACGTGGACA
>site_26
CACCCACGTGCACG
>site_27
CGTGCACGTGGGTG
>site_28
TTTGCTCGTGCGCC
>site_29
GGCGCACGAGCAAA
>site_30
TAGTCACGTGCTGC
>site_31
GCAGCACGTGACTA
>site_32
CCCGCACGTGCCAC
>site_33
GTGGCACGTGCGGG
>site_34
CACGCACGTGGTCT
>site_35
AGACCACGTGCGTG
>site_36
TCCGCACATGCTCT
>site_37
AGAGCATGTGCGGA
>site_38
GACCCACGTGCCCG
>site_39
CGGGCACGTGGGTC
>site_40
CTGGCACCTGCGCT
>site_41
AGCGCAGGTGCCAG
>site_42
ACTCCACGTGCATC
>site_43
GATGCACGTGGAGT
>site_44
GCTGCACGAGCATA
>site_45
TATGCTCGTGCAGC
>site_46
CGTGCACATGCAAT
>site_47
ATTGCATGTGCACG
>site_48
AATGCCCGTGCCTT
>site_49
AAGGCACGGGCATT
>site_50
GTCGCACGTGCGCC
>site_51
GGCGCACGTGCGAC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m1_rc.png
;
a	10	2	0	31	0	1	21	32	0	0	14	15	9
c	14	7	0	0	3	0	10	0	0	32	6	7	6
g	4	1	27	1	29	3	0	0	32	0	6	7	10
t	4	22	5	0	0	28	1	0	0	0	6	3	7
//
; Sites	32
>site_0
CTGAGTAAGCAGC
>site_1
GCGAGTTAGCGAG
>site_2
ATGAGTCAGCAGT
>site_3
CTGAGTCAGCCGA
>site_4
ATTAGTAAGCAAC
>site_5
CTGAGTCAGCAGG
>site_6
ATGACTAAGCGAG
>site_7
TTTAGTAAGCTAG
>site_8
ATTAGTAAGCTTT
>site_9
CTGAGTCAGCAAT
>site_10
CTGAGTCAGCCAC
>site_11
ATGAGTCAGCGAC
>site_12
ATGAGTAAGCCAG
>site_13
CTGAGTCAGCAGT
>site_14
ATTACTAAGCATA
>site_15
TCGAGGAAGCTCA
>site_16
CTGAGTAAGCATA
>site_17
CAGAGTAAGCTCC
>site_18
GAGAGTAAGCAGT
>site_19
TCGAGGAAGCTCA
>site_20
ATGAGTAAGCGAT
>site_21
CTGAGTCAGCCCG
>site_22
CTGAGTAAGCAAT
>site_23
ATGACTAAGCAAA
>site_24
CCGAGTAAGCAAC
>site_25
GCGAGTCAGCAAG
>site_26
TCGAGGAAGCTCA
>site_27
GGGAGAAAGCCAG
>site_28
CTGAGTAAGCGGA
>site_29
ATTAGTAAGCGAG
>site_30
CCGGGTAAGCCCA
>site_31
CTGAGTCAGCACG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m2_rc.png
;
a	7	5	1	7	1	0	37	0	0	6	36	0	0	16	11
c	12	8	2	30	1	0	0	24	0	32	1	0	38	10	6
g	10	10	34	0	0	32	0	14	0	0	0	33	0	7	13
t	9	15	1	1	36	6	1	0	38	0	1	5	0	5	8
//
; Sites	38
>site_0
CTGCTTACTCAGCAC
>site_1
GTGCTGAGTAAGCAG
>site_2
ATGATGAGTCAGCAG
>site_3
CTGCTGACTCATCAT
>site_4
TGGATGACTCAGCCG
>site_5
CGGCTGAGTCATCCA
>site_6
CGGCTGACTCAGCAT
>site_7
ATGCTGAGTCAGCCG
>site_8
CGGCTGAGTCAGCAG
>site_9
CTGCTGACTCAGCCG
>site_10
ATGATGACTAAGCGA
>site_11
CAAATGACTCAGCAA
>site_12
TTGCTGACTCAGCTT
>site_13
AAGCTGAGTCAGCAA
>site_14
TGGCTGACTCAGCCA
>site_15
TGGCTGAGTCAGCCA
>site_16
GCGATGAGTCAGCGA
>site_17
TCGCTGACTCATCGC
>site_18
TGGCTTACTCATCAT
>site_19
GAGCTGAGTCAGCAG
>site_20
CTGCTGACTCAGCTC
>site_21
ATCCCGACTCAGCCA
>site_22
ATGCTTACTCAGCGG
>site_23
CCGCTGAGTAAGCAT
>site_24
GAGCAGACTCCGCAT
>site_25
TCGCTTACTCATCTC
>site_26
GGGCTGACTCAGCTG
>site_27
CAGCTGAGTCAGCCC
>site_28
TTGCTTACTCAGCAA
>site_29
TTGCTGAGTAAGCAA
>site_30
GTGATGACTAAGCAA
>site_31
GGGCTGTCTCTGCCT
>site_32
GCTTTGACTCAGCTG
>site_33
CCGCTTACTCAGCGG
>site_34
CCGCTGAGTAAGCGG
>site_35
GCCATGACTCAGCGG
>site_36
AGGCTGAGTCAGCAC
>site_37
GTGCTGACTCAGCCT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m3_rc.png
;
a	3	7	0	0	0	0	0	1	22	1	9	3	5
c	7	4	20	21	0	1	0	20	0	5	3	10	8
g	8	5	2	1	1	21	0	1	0	13	5	4	5
t	4	6	0	0	21	0	22	0	0	3	5	5	4
//
; Sites	22
>site_0
GACCTGTCAGAAG
>site_1
CGCCTGTCACTTT
>site_2
CTCCTGTCACTCG
>site_3
GACCTGTAAGCGA
>site_4
CGCCTGTCACTTA
>site_5
AACCTGTCAGGCC
>site_6
ACCCTGTCATCTT
>site_7
TTGCTGTCAGATG
>site_8
GACCTGTCAGAGC
>site_9
GACCTGTCATGCC
>site_10
CTCCTGTCAGCAC
>site_11
TGCGTGTCAGAGT
>site_12
GTCCTGTCAGTTC
>site_13
TCCCTGTCAGACA
>site_14
CACCTGTCAAACC
>site_15
GCCCTGTCAGGCC
>site_16
AGCCTGTCACGGA
>site_17
TTCCTCTCAGGCG
>site_18
GCCCTGTGATACC
>site_19
GGCCGGTCAGAAG
>site_20
CAGCTGTCAGACT
>site_21
CTCCTGTCACTCA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m4_rc.png
;
a	13	11	11	0	3	44	0	1	4	1	3	9	13	11
c	11	14	13	4	46	2	48	0	3	0	4	12	14	16
g	15	14	16	42	0	0	1	48	1	45	39	15	15	10
t	10	10	9	3	0	3	0	0	41	3	3	13	7	12
//
; Sites	49
>site_0
CGGGCCCGTGGGTT
>site_1
TTGGCACGTGGCGA
>site_2
GCAGCACGAGGAAC
>site_3
TGGGCACGTGGGGA
>site_4
AAGGCACGTGGTTG
>site_5
TTGGCTCGTGGTCC
>site_6
ACTGCACGTTGGAC
>site_7
AAGGCACGTGTTGA
>site_8
TTGGCACGTGGGGC
>site_9
TCTGCACGTGGTGG
>site_10
TCAGCACGTGTCTG
>site_11
CTATCACGTGGAGA
>site_12
AATGCACGAGGAAT
>site_13
AGCGCACGTGATGT
>site_14
ATGGCACGGGGAAA
>site_15
GCGGCACGTGTAAC
>site_16
CGGGCACGCGGACG
>site_17
GTTGCACGTGACCA
>site_18
CCAGAACGTGGCAG
>site_19
GCCGCACGTTGCAC
>site_20
GAAGCACGTGGACA
>site_21
CGTGCACGTGGGTG
>site_22
CGTGCACGCGGTAT
>site_23
TTTGCCCGTGGCCT
>site_24
AAGGCAGGTGGAAG
>site_25
TCAGCACGTAGCGC
>site_26
GCAGCACGTGACTA
>site_27
AGAGAACGTGGTCT
>site_28
CCCGCACGTGCCAC
>site_29
GTGGCACGTGCGGG
>site_30
AACGCACGAGGTCC
>site_31
AGCTCACGTGGGAG
>site_32
CACGCACGTGGTCT
>site_33
CGGGCACGTGGGTC
>site_34
GCAGAACGTGGGCA
>site_35
GGAGCTCGTGGTGT
>site_36
GATGCACGTGGAGT
>site_37
GGCGCACATGGCGC
>site_38
ACCGCACGCGGTAA
>site_39
ACCCCACGTGGCCC
>site_40
GGGCCACGTGGGGT
>site_41
CAGGCTCGTGGTCT
>site_42
CTGGCACGTTGGCC
>site_43
TCTGCACGAGGCGG
>site_44
GTCGCACGTGCGCC
>site_45
GGCGCACGTGCGAC
>site_46
TAATCACGTGGTGA
>site_47
GACCCACGTGGGCT
>site_48
AGCCCACGTGGGTC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121447_2025-08-17.121447_Kvls6d/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2025-08-17.121502
; Job done	2025-08-17.121503
; Seconds	0.15
;	user	0.15
;	system	0.02
;	cuser	1.36
;	csystem	0.25
