; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121501_2025-08-17.121501_7wfl8K/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121501_2025-08-17.121501_7wfl8K/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121501_2025-08-17.121501_7wfl8K/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/08/17/peak-motifs.2025-08-17.121501_2025-08-17.121501_7wfl8K/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	7	8	3	7	1	0	40	0	0	4	41	1	2	20	8	4
c	12	10	0	29	2	1	2	14	1	38	0	0	40	7	12	15
g	10	9	38	4	1	36	0	28	1	0	1	36	0	10	17	10
t	13	15	1	2	38	5	0	0	40	0	0	5	0	5	5	13
//
; Sites	42
>site_0
TTGCTTAGTCATCATT
>site_1
CTGCTGACTCATCATT
>site_2
ATGATGAGTCAGCAGT
>site_3
AAGGTTAGTCAGCCGG
>site_4
CTGCTGACTCAGCCGC
>site_5
CGGCTGAGTCAGCAGG
>site_6
TTGATGAGTCATCTGT
>site_7
CTGCTGACTCAGCTCC
>site_8
GAGCTGAGTCAGCAGG
>site_9
CTGCCGAGCCAGCGCC
>site_10
TCGCTTAGTCATCATT
>site_11
TGGCTGAGTCAGCCAC
>site_12
TGGCTGACTCAGCCAG
>site_13
TCGCTGACTCATCGCC
>site_14
GCGATGAGTCAGCGAC
>site_15
TTGCTGACTCAGCAAC
>site_16
TTGCTGAGTCAGCAAG
>site_17
CTGCTGACTCAGCTCC
>site_18
GAGCTGAGTCAGCAGT
>site_19
ACAATGAGTAAGCATG
>site_20
CTGCTGAGTCAGCTGA
>site_21
CAGCTGACTCAGCAGA
>site_22
AAGGAGAGTAAGCAGT
>site_23
GTGCTGACTCAGCGCT
>site_24
GCGCTGAGTCAGCACT
>site_25
GCGTGGAGTCAGCAGC
>site_26
CAGCTGAGTCAGCCCG
>site_27
GGGCTGACTCAGCTGC
>site_28
TAAATGAGTCAGCGGA
>site_29
CTGCTGCGTCAGCCAC
>site_30
TGGCTGACGCAGCAGG
>site_31
TGGCTCAGTCGGCAAT
>site_32
GTGCTGAGTCAACCAG
>site_33
TGGTTGACTCAGCACC
>site_34
AGGATGCGTCAGCGGC
>site_35
CCGCTGAGTAAGCGGA
>site_36
CCGCTTACTCAGCGGC
>site_37
ACAGTTAGTCAGCATT
>site_38
GCTCTGACTCAGCACT
>site_39
GTGCTGAGTCAGAGCT
>site_40
AAGGTGAGTAAGCGCC
>site_41
TGGACGAGTCAGAACG
a	10	9	5	0	46	0	1	2	0	0	10	11
c	19	16	7	50	2	46	3	0	0	38	15	10
g	10	15	38	0	0	3	46	2	50	7	16	19
t	11	10	0	0	2	1	0	46	0	5	9	10
//
; Sites	50
>site_0
TGGCACGTGGCG
>site_1
CGCCACGTGCCA
>site_2
GGGCACGTGGGG
>site_3
CCCCACGTGCCC
>site_4
GGGCACGGGCTT
>site_5
AAGCCCGTGCCC
>site_6
TAGCACGTGCGG
>site_7
CCGCACGTGCTA
>site_8
ACACACGTGCTG
>site_9
CAGCACGTGTGT
>site_10
CGACACGTGCCG
>site_11
CGGCACGTGTCG
>site_12
CAGCACGAGCAG
>site_13
CTGCTCGTGCTG
>site_14
CGACACGTGCCG
>site_15
CGGCACGTGTCG
>site_16
GAGCACGGGCGT
>site_17
ACGCCCGTGCTC
>site_18
CGGCACGTGTAA
>site_19
TTACACGTGCCG
>site_20
TCGCACGTGCTG
>site_21
CAGCACGTGCGA
>site_22
TGCCACGTGCGC
>site_23
GCGCACGTGGCA
>site_24
ACCCACGTGCAC
>site_25
GTGCACGTGGGT
>site_26
GTGCAGGTGCAG
>site_27
CTGCACCTGCAC
>site_28
TTGCTCGTGCGC
>site_29
GCGCACGAGCAA
>site_30
CCGCAGGTGCCA
>site_31
TGGCACCTGCGG
>site_32
CCGCACGTGCCA
>site_33
TGGCACGTGCGG
>site_34
ACGCACGTGTGG
>site_35
CCACACGTGCGT
>site_36
ACGCACGTGGTC
>site_37
GACCACGTGCGT
>site_38
TGGCACCTGCGC
>site_39
GCGCAGGTGCCA
>site_40
CTCCACGTGCAA
>site_41
TTGCACGTGGAG
>site_42
AAGCATGTGCCG
>site_43
CGGCACATGCTT
>site_44
ATCCACGTGCTT
>site_45
AAGCACGTGGAT
>site_46
CGGCACGTGCAT
>site_47
ATGCACGTGCCG
>site_48
TCGCACGTGCGC
>site_49
GCGCACGTGCGA
a	4	13	2	1	29	0	0	24	0	0	10	4
c	9	1	24	29	1	30	2	1	2	4	8	12
g	11	8	4	0	0	0	28	3	27	24	8	5
t	6	8	0	0	0	0	0	2	1	2	4	9
//
; Sites	30
>site_0
GGCCACGAGTGC
>site_1
GACCACCAGGGT
>site_2
CTCCACGAGCCC
>site_3
CACCACGAGGAT
>site_4
AGCCACCAGGGT
>site_5
AACCACGAGTTT
>site_6
GTCCCCGAGGGG
>site_7
TTCCACGAGGGA
>site_8
GCCCACGTGGAA
>site_9
TTCCACGTGGGC
>site_10
TTCCACGAGGAA
>site_11
AGCCACGATGCC
>site_12
TTGCACGAGGTC
>site_13
TACCACGGGGAG
>site_14
GACCACGAGGAT
>site_15
AACCACGACGAA
>site_16
CGCCACGGGGCT
>site_17
CACCACGAGCGC
>site_18
CGCAACGAGGCC
>site_19
GGCCACGACGAT
>site_20
CAGCACGAGGAC
>site_21
CGCCACGAGCAT
>site_22
TTACACGAGGAC
>site_23
GAACACGAGGGG
>site_24
CGCCACGCGGCC
>site_25
GACCACGAGCCT
>site_26
GACCACGGGGTC
>site_27
CTGCACGAGGCG
>site_28
GACCACGAGGTC
>site_29
GAGCACGAGGCG
a	8	3	41	2	2	37	46	2	0	14	17
c	12	12	4	5	0	8	1	1	49	8	10
g	10	17	2	42	2	2	1	44	0	14	13
t	19	17	2	0	45	2	1	2	0	13	9
//
; Sites	49
>site_0
CGAGTTAGCGA
>site_1
CTAGTGAGCAC
>site_2
GCAATAAGCCC
>site_3
TGACTAAGCAA
>site_4
ACAGTCAGCCC
>site_5
CCAGAAAGCCC
>site_6
TTAGTCAGCCG
>site_7
CCTGTAAGCGA
>site_8
ACAGTAAGCAA
>site_9
ATAGTAAACTT
>site_10
TTAGTAAGCTA
>site_11
TGACTAAGCGA
>site_12
TTAGTAAGCTA
>site_13
CGACTAAGCCA
>site_14
TGAGTCAGCGA
>site_15
TTAGTAAGCTA
>site_16
CCAGTAAGCAT
>site_17
GCGGTAAGCGT
>site_18
GCAGTTAGCGC
>site_19
TTACTAAGCAT
>site_20
TTAGTAATCAA
>site_21
CTAGTATGCTG
>site_22
CGAGGAAGCCG
>site_23
TGAGTAAGCAT
>site_24
ACAGGAAGCTG
>site_25
TGCGTAAGCAA
>site_26
AGAGTAAGCTC
>site_27
AGAGTAAGCAG
>site_28
GTAGAAAGCGT
>site_29
TTGGTAAGCGA
>site_30
GGAGTCAGCAG
>site_31
TGAGTCAGCCC
>site_32
TGAGTCAGCGG
>site_33
TTTGTAAGCTA
>site_34
GCCGTAAGCGC
>site_35
GAAGTAATCTG
>site_36
CTAGTCAGCAA
>site_37
GCACTAAGCGC
>site_38
ATAGTAAACTT
>site_39
TGAATAAGCGT
>site_40
AAAGTACGCCG
>site_41
GTCGTAAGCAG
>site_42
GTAGTAGGCTA
>site_43
CGAGTGAGCTG
>site_44
TGAGTAAGCGG
>site_45
TTAGTCAGCAT
>site_46
CCAGTAACCTA
>site_47
TGAGTAAGCGC
>site_48
CACGTAAGCAG
a	18	18	4	1	1	2	51	2	44	8	7
c	6	10	3	42	1	1	1	47	1	16	18
g	16	15	5	0	0	49	0	2	1	18	17
t	12	9	40	9	50	0	0	1	6	10	10
//
; Sites	52
>site_0
GATCTGACTTG
>site_1
GATTTGACAGC
>site_2
ACACTGACAGC
>site_3
TTTTTGACACT
>site_4
GATCTGACATT
>site_5
TGGCTGACAAC
>site_6
ACTTTGACATC
>site_7
TCGCTGACAGG
>site_8
GCACTGACAGT
>site_9
AGTCCGACACC
>site_10
GATTTGACAGT
>site_11
ATTTTGACACC
>site_12
CGTCTGACCTG
>site_13
AATCTGAGATG
>site_14
AATCTGATAAA
>site_15
ATTCTGACACC
>site_16
TATCTGACAAC
>site_17
GGTCTGACAGC
>site_18
TTTCTGACAGG
>site_19
AGTCAGACAAG
>site_20
TGTCTGACTTG
>site_21
GACCTGACAAG
>site_22
CAGCTGACACC
>site_23
GTTTTGACAGC
>site_24
GATCTAACAGC
>site_25
TCTCTCACAAA
>site_26
CGTCTGACACC
>site_27
TGACTGACATG
>site_28
AGTCTGACACA
>site_29
ATTCTGAAACG
>site_30
GATCTGACAGG
>site_31
TGACTGACAGT
>site_32
GGCCTGACAGG
>site_33
AATCTGACAAA
>site_34
GATCTGACTTT
>site_35
AATCTGAAACG
>site_36
GCTTTGACAGC
>site_37
CATATGACACG
>site_38
ATTCTGACTGT
>site_39
GGTCTAACACC
>site_40
CATCTGAGACA
>site_41
CGTCTGCCATG
>site_42
ATGCTGACACG
>site_43
TGTCTGACATT
>site_44
AACCTGACAGT
>site_45
ACGCTGACAGC
>site_46
TCTTTGACAAA
>site_47
AATTTGACAGC
>site_48
GCTCTGACTCA
>site_49
TCTCTGACGCT
>site_50
AGTCTGACAGC
>site_51
GTTCTGACTCG
; Host name	rsat
; Job started	2025-08-17.121513
; Job done	2025-08-17.121513
; Seconds	0.11
;	user	0.11
;	system	0.02
;	cuser	0
;	csystem	0
