; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/08/22/oligo-analysis_2025-08-22.072214_6l4loP_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/08/22/oligo-analysis_2025-08-22.072214_6l4loP_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/08/22/oligo-analysis_2025-08-22.072214_6l4loP_pssm_count_matrices_links.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/08/22/oligo-analysis_2025-08-22.072214_6l4loP_pssm_count_matrices.tf
; Input format tf
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/08/22/oligo-analysis_2025-08-22.072214_6l4loP_pssm_count_matrices_links.txt
; Output format tab
; pseudo-weight 1
a 2 2 3 0 0 0 0 0 0 3 0 0 0 0
c 0 1 0 0 3 3 3 0 3 0 3 2 0 0
g 0 0 0 3 0 0 0 3 0 0 0 0 2 1
t 1 0 0 0 0 0 0 0 0 0 0 1 1 2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/22//oligo-analysis_2025-08-22.072214_6l4loP_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/22//oligo-analysis_2025-08-22.072214_6l4loP_pssm_count_matrices_logo_m1_rc.png
;
a 0 1 2 1 1 0 0 0 0 0 0 0 0 0 0 1
c 0 0 1 2 0 0 0 0 3 0 0 0 3 0 0 0
g 1 1 0 0 2 3 0 3 0 3 3 3 0 0 1 0
t 2 1 0 0 0 0 3 0 0 0 0 0 0 3 2 2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/22//oligo-analysis_2025-08-22.072214_6l4loP_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/22//oligo-analysis_2025-08-22.072214_6l4loP_pssm_count_matrices_logo_m2_rc.png
;
a 2 1 4 0 1 1 4 4 0 2 3
c 1 1 0 0 0 0 0 0 4 0 1
g 1 2 0 4 3 0 0 0 0 1 0
t 0 0 0 0 0 3 0 0 0 1 0
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/22//oligo-analysis_2025-08-22.072214_6l4loP_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/22//oligo-analysis_2025-08-22.072214_6l4loP_pssm_count_matrices_logo_m3_rc.png
;
; Host name rsat
; Job started 2025-08-22.072219
; Job done 2025-08-22.072220
; Seconds 0.16
; user 0.16
; system 0.02
; cuser 0.79
; csystem 0.09