; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/08/26/dyad-analysis_2025-08-26.153505_PXBqtk_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/www-data/2025/08/26/dyad-analysis_2025-08-26.153505_PXBqtk_pssm_count_matrices.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/08/26/dyad-analysis_2025-08-26.153505_PXBqtk_pssm_count_matrices.tf
; Input format transfac
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/08/26/dyad-analysis_2025-08-26.153505_PXBqtk_pssm_count_matrices.txt
; Output format tab
; pseudo-weight 1
a 3 3 8 0 0 0 0 0 1 3 5
c 2 3 0 8 0 0 0 8 1 0 1
g 2 1 0 0 8 0 8 0 4 3 1
t 1 1 0 0 0 8 0 0 2 2 1
//
a 5 4 0 0 0 0 10 10 5 2
c 3 1 0 0 10 10 0 0 1 0
g 2 2 0 10 0 0 0 0 3 2
t 0 3 10 0 0 0 0 0 1 6
//
a 3 2 11 2 0 0 3 3 3 8 2 4 3 0 1 12 6 4
c 6 6 0 10 0 0 3 1 2 1 1 1 0 11 9 0 3 3
g 3 1 1 0 12 0 4 2 5 1 3 1 6 1 1 0 2 4
t 0 3 0 0 0 12 2 6 2 2 6 6 3 0 1 0 1 1
//
a 4 4 6 0 0 0 4 1 5 2 2 6 0 0 2 2
c 1 0 0 6 0 1 0 2 1 1 1 0 0 6 1 2
g 1 0 0 0 6 0 2 0 0 0 2 0 6 0 2 1
t 0 2 0 0 0 5 0 3 0 3 1 0 0 0 1 1
//
a 1 2 0 0 0 2 6 8 4 4 5 3 3 1 4 0 3 8 3 3 0 9 9 1 3
c 2 2 0 0 9 3 1 0 1 0 3 2 1 1 2 1 1 0 1 1 0 0 0 2 4
g 3 2 0 9 0 3 1 1 2 3 1 4 1 5 2 2 1 0 1 2 0 0 0 2 2
t 3 3 9 0 0 1 1 0 2 2 0 0 4 2 1 6 4 1 4 3 9 0 0 4 0
//
a 1 0 7 7 0 0 2 1 2 3 4 2 2 3 2 3 5 0 0 0 1 0
c 3 2 0 0 0 0 1 2 2 1 0 2 0 2 3 2 0 7 0 0 2 2
g 2 3 0 0 0 4 1 3 2 1 1 2 1 1 1 2 2 0 7 0 3 3
t 1 2 0 0 7 3 3 1 1 2 2 1 4 1 1 0 0 0 0 7 1 2
//
; Host name rsat
; Job started 2025-08-26.153511
; Job done 2025-08-26.153511
; Seconds 0.1
; user 0.1
; system 0.01
; cuser 0
; csystem 0