; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/08/26/oligo-analysis_2025-08-26.152603_cTxDsi_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/08/26/oligo-analysis_2025-08-26.152603_cTxDsi_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/08/26/oligo-analysis_2025-08-26.152603_cTxDsi_pssm_count_matrices_links.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/08/26/oligo-analysis_2025-08-26.152603_cTxDsi_pssm_count_matrices.tf
; Input format tf
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/08/26/oligo-analysis_2025-08-26.152603_cTxDsi_pssm_count_matrices_links.txt
; Output format tab
; pseudo-weight 1
a 3 3 1 2 1 12 0 1 0 0 0 0 7 4
c 3 2 9 4 11 0 11 0 0 0 6 2 0 2
g 2 0 2 6 0 0 0 11 0 11 4 9 2 3
t 4 7 0 0 0 0 1 0 12 1 2 1 3 3
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/26//oligo-analysis_2025-08-26.152603_cTxDsi_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/26//oligo-analysis_2025-08-26.152603_cTxDsi_pssm_count_matrices_logo_m1_rc.png
;
a 5 4 0 0 0 0 10 10 5 2 5
c 3 1 0 0 10 10 0 0 1 0 0
g 2 2 0 10 0 0 0 0 3 2 0
t 0 3 10 0 0 0 0 0 1 6 5
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/26//oligo-analysis_2025-08-26.152603_cTxDsi_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/26//oligo-analysis_2025-08-26.152603_cTxDsi_pssm_count_matrices_logo_m2_rc.png
;
a 2 2 1 2 0 8 0 0 0 0 0 0 5 2
c 2 1 6 2 8 0 8 0 0 0 2 1 0 2
g 1 0 1 4 0 0 0 8 0 7 4 7 1 2
t 3 5 0 0 0 0 0 0 8 1 2 0 2 2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/26//oligo-analysis_2025-08-26.152603_cTxDsi_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/26//oligo-analysis_2025-08-26.152603_cTxDsi_pssm_count_matrices_logo_m3_rc.png
;
a 3 3 4 8 0 0 0 0 0 1 4 5
c 3 2 3 0 9 0 0 0 9 1 0 2
g 2 3 1 1 0 9 0 9 0 5 3 1
t 1 1 1 0 0 0 9 0 0 2 2 1
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/26//oligo-analysis_2025-08-26.152603_cTxDsi_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/26//oligo-analysis_2025-08-26.152603_cTxDsi_pssm_count_matrices_logo_m4_rc.png
;
a 2 4 6 0 0 6 0 0 2 2
c 1 1 0 0 0 0 0 6 0 3
g 1 0 0 0 0 0 6 0 2 1
t 2 1 0 6 6 0 0 0 2 0
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/26//oligo-analysis_2025-08-26.152603_cTxDsi_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/26//oligo-analysis_2025-08-26.152603_cTxDsi_pssm_count_matrices_logo_m5_rc.png
;
; Host name rsat
; Job started 2025-08-26.152608
; Job done 2025-08-26.152610
; Seconds 0.12
; user 0.12
; system 0.04
; cuser 1.32
; csystem 0.19