; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/08/26/oligo-analysis_2025-08-26.165919_97du1g_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/www-data/2025/08/26/oligo-analysis_2025-08-26.165919_97du1g_pssm_count_matrices.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/08/26/oligo-analysis_2025-08-26.165919_97du1g_pssm_count_matrices.tf
; Input format transfac
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/08/26/oligo-analysis_2025-08-26.165919_97du1g_pssm_count_matrices.txt
; Output format tab
; pseudo-weight 1
a 1 2 0 2 0 0 0 0 1 3 0 0 0 0
c 1 1 3 0 2 0 0 1 1 0 3 0 1 1
g 0 0 0 1 0 3 0 2 1 0 0 3 0 2
t 1 0 0 0 1 0 3 0 0 0 0 0 2 0
//
a 2 0 1 0 0 6 0 1 0 0 0 0 4 2 3 3
c 1 2 3 1 6 0 5 0 0 0 5 2 0 1 1 0
g 1 0 2 5 0 0 0 5 0 6 1 3 2 1 1 1
t 2 4 0 0 0 0 1 0 6 0 0 1 0 2 1 2
//
a 1 1 2 0 0 0 0 4 0 1 0 0 0 0 3 2 3
c 1 1 0 1 3 1 4 0 4 0 0 0 4 2 0 0 0
g 0 1 1 0 1 3 0 0 0 3 0 4 0 1 1 1 0
t 2 1 1 3 0 0 0 0 0 0 4 0 0 1 0 1 1
//
; Host name rsat
; Job started 2025-08-26.165921
; Job done 2025-08-26.165921
; Seconds 0.15
; user 0.15
; system 0.01
; cuser 0
; csystem 0