; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/08/26/oligo-analysis_2025-08-26.165949_JVMeaS_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/www-data/2025/08/26/oligo-analysis_2025-08-26.165949_JVMeaS_pssm_count_matrices.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/08/26/oligo-analysis_2025-08-26.165949_JVMeaS_pssm_count_matrices.tf
; Input format transfac
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/08/26/oligo-analysis_2025-08-26.165949_JVMeaS_pssm_count_matrices.txt
; Output format tab
; pseudo-weight 1
a 2 1 3 1 0 0 0 5 1 1 0 0 0 1 3 3
c 1 1 0 1 4 1 5 0 4 1 0 0 5 2 1 0
g 0 2 1 0 1 4 0 0 0 3 0 5 0 1 1 1
t 2 1 1 3 0 0 0 0 0 0 5 0 0 1 0 1
//
a 1 1 2 1 1 0 0 3 0 1 0 0 0 0 4 3 3 2 2
c 0 0 1 0 2 0 4 0 4 0 0 0 4 3 0 0 0 0 1
g 0 1 0 0 1 3 0 1 0 3 0 4 0 1 0 0 0 1 0
t 3 2 1 3 0 1 0 0 0 0 4 0 0 0 0 1 1 1 1
//
a 0 1 1 0 0 4 0 0 0 0 0 2 1 0 0 1 1 1
c 2 1 1 2 4 0 4 0 0 0 0 0 1 2 1 0 0 0
g 1 1 0 2 0 0 0 4 0 3 4 2 1 2 1 2 1 0
t 1 1 2 0 0 0 0 0 4 1 0 0 1 0 2 1 2 3
//
a 3 4 3 6 0 0 0 0 0 3 1 3 2
c 1 2 2 0 6 0 0 1 5 0 2 1 0
g 0 0 0 0 0 6 0 5 1 2 1 2 0
t 2 0 1 0 0 0 6 0 0 1 2 0 4
//
a 2 2 2 1 0 2 0 0 5 0 0 0 0 0 0 3 1 1 3
c 0 0 0 1 1 1 0 5 0 4 0 0 0 3 1 1 1 2 0
g 1 0 0 0 0 2 5 0 0 0 5 0 4 1 3 1 1 1 1
t 2 3 3 3 4 0 0 0 0 1 0 5 1 1 1 0 2 1 1
//
; Host name rsat
; Job started 2025-08-26.165956
; Job done 2025-08-26.165956
; Seconds 0.12
; user 0.12
; system 0.02
; cuser 0
; csystem 0