; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/08/28/position-analysis_2025-08-28.164833_iclman/position-analysis_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/08/28/position-analysis_2025-08-28.164833_iclman/position-analysis_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/08/28/position-analysis_2025-08-28.164833_iclman/position-analysis_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/08/28/position-analysis_2025-08-28.164833_iclman/position-analysis_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/08/28/position-analysis_2025-08-28.164833_iclman/position-analysis_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	151	133	467	0	467	467	467	467	116	163
c	101	139	0	0	0	0	0	0	119	103
g	113	112	0	467	0	0	0	0	138	115
t	102	83	0	0	0	0	0	0	94	86
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/28/position-analysis_2025-08-28.164833_iclman//position-analysis_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/28/position-analysis_2025-08-28.164833_iclman//position-analysis_pssm_count_matrices_logo_m1_rc.png
;
a	207	211	119	23	761	703	776	13	28	47	16	759	456	534	114	109	126	138	316	238	256	203
c	95	106	216	755	43	38	3	10	9	652	794	30	144	59	60	106	199	456	187	194	162	171
g	391	300	329	24	14	85	47	805	77	61	4	20	181	158	547	411	152	120	155	237	212	259
t	149	225	178	40	24	16	16	14	728	82	28	33	61	91	121	216	365	128	184	173	212	209
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/28/position-analysis_2025-08-28.164833_iclman//position-analysis_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/08/28/position-analysis_2025-08-28.164833_iclman//position-analysis_pssm_count_matrices_logo_m2_rc.png
;
; Host name	rsat
; Job started	2025-08-28.164851
; Job done	2025-08-28.164852
; Seconds	0.18
;	user	0.18
;	system	0.02
;	cuser	0.65
;	csystem	0.06