/var/www/html/rsat/public_html/tmp/www-data/2025/09/03/peak-motifs.2025-09-03.113949_2025-09-03.113949_eRwEjV/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab 
 position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2025/09/03/peak-motifs.2025-09-03.113949_2025-09-03.113949_eRwEjV/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 2 -ci 20 -img_format png -title VE2ALL_100 -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2025/09/03/peak-motifs.2025-09-03.113949_2025-09-03.113949_eRwEjV/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Citation: van Helden, et al. (2000).  Nucleic Acids Res 28, 1000-1010.
 Sequence file                	$RSAT/public_html/tmp/www-data/2025/09/03/peak-motifs.2025-09-03.113949_2025-09-03.113949_eRwEjV/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta
 Sequence format              	fasta
 Sequence type                	dna
 Output file                  	$RSAT/public_html/tmp/www-data/2025/09/03/peak-motifs.2025-09-03.113949_2025-09-03.113949_eRwEjV/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Oligo length                 	2
 Occurrences counted  on a single  strands
 Conditions of applicability checked.
 Background model estimation: homogeneous repartition
 Sequence statistics:
	Nb of sequences              	898
	Sum of sequence lengths      	179600
	Min sequence length          	0
	Max sequence length          	200
	Average sequence length      	200
	Possible positions           	178702
 Oligonucleotide statistics:
	Total occurrences    	178609
 Position interval parameters:
	Position interval    	20
	Number of windows    	10
	Total positions      	178702
	Degrees of freedom   	9
 K-mer clustering parameters:
	Number of clusters   	0
	Clustering method    	complete
 Position intervals:
	window	[min,max]	mid	seq	occ
	1	-5	[-99,-80]	-89.5	898	17960
	2	-4	[-79,-60]	-69.5	898	17960
	3	-3	[-59,-40]	-49.5	898	17960
	4	-2	[-39,-20]	-29.5	898	17960
	5	-1	[-19,0]	-9.5	898	17960
	6	0	[1,20]	10.5	898	17960
	7	1	[21,40]	30.5	898	17960
	8	2	[41,60]	50.5	898	17960
	9	3	[61,80]	70.5	898	17960
	10	4	[81,100]	90.5	898	17062

 Column headers
	1	seq            	pattern sequence
	2	id             	pattern identifier
	3	occ            	pattern occurrences
	4	chi2           	observed chi-square
	5	df             	degrees of freedom
	6	Pval           	P-value (probability for one word to be a false positive)
	7	Eval           	E-value; expected number of false positives (Eval = Pval * nb_tests)
	8	sig            	Significance (sig = -log10(Eval))
	9	rank           	rank of the pattern according to sorting criterion
	10	-89.5          	occurrences in window	1	[-99,-80]
	11	-69.5          	occurrences in window	2	[-79,-60]
	12	-49.5          	occurrences in window	3	[-59,-40]
	13	-29.5          	occurrences in window	4	[-39,-20]
	14	-9.5           	occurrences in window	5	[-19,0]
	15	10.5           	occurrences in window	6	[1,20]
	16	30.5           	occurrences in window	7	[21,40]
	17	50.5           	occurrences in window	8	[41,60]
	18	70.5           	occurrences in window	9	[61,80]
	19	90.5           	occurrences in window	10	[81,100]
seq id occ chi2 df Pval Eval sig rank -89.5 -69.5 -49.5 -29.5 -9.5 10.5 30.5 50.5 70.5 90.5
cc cc 13458 59.8 9 1.5e-09 2.4e-08 7.62 1 1304 1266 1384 1437 1492 1503 1297 1297 1243 1235
gg gg 13479 26.2 9 1.9e-03 0.031 1.51 2 1317 1301 1343 1356 1370 1470 1435 1330 1254 1303
tt tt 11327 25.2 9 2.7e-03 0.044 1.36 3 1126 1150 1062 1123 1029 1159 1157 1175 1211 1135
aa aa 11086 24.8 9 3.3e-03 0.052 1.28 4 1163 1188 1070 1053 1082 1029 1106 1118 1161 1116
gt gt 10637 20.6 9 1.4e-02 0.23 0.64 5 1055 1061 1027 989 1037 1130 1120 1045 1143 1030
cg cg 11298 20.6 9 1.5e-02 0.24 0.63 6 1154 1108 1146 1113 1217 1202 1163 1103 1096 996
at at 9546 17.7 9 3.9e-02 0.62 0.21 7 962 949 974 1008 898 902 913 1022 981 937
ac ac 10731 17.2 9 4.5e-02 0.73 0.14 8 1085 1078 1078 1076 1157 1054 1141 1014 1018 1030
ta ta 7203 16.5 9 5.8e-02 0.92 0.04 9 772 723 745 692 693 669 706 720 785 698
tc tc 11331 15.1 9 8.9e-02 1.4 -0.15 10 1140 1107 1118 1174 1125 1173 1075 1197 1192 1030
tg tg 12121 14.7 9 1.0e-01 1.6 -0.21 11 1201 1234 1200 1206 1159 1175 1262 1183 1272 1229
ca ca 12193 13.3 9 1.5e-01 2.4 -0.38 12 1189 1269 1209 1282 1259 1205 1183 1270 1160 1167
gc gc 11885 13.1 9 1.6e-01 2.5 -0.40 13 1191 1226 1237 1227 1251 1155 1144 1214 1146 1094
ct ct 10489 10.2 9 3.4e-01 5.4 -0.73 14 1098 1039 1075 1069 1025 1016 994 1071 1095 1007
ag ag 10468 9.0 9 4.4e-01 7 -0.84 15 1067 1094 1083 1023 1049 1007 1042 1061 1088 954
ga ga 11357 8.4 9 4.9e-01 7.9 -0.90 16 1134 1147 1189 1127 1117 1106 1202 1120 1114 1101 
 Host name	rsat
 Job started	2025-09-03.113953
 Job done	2025-09-03.113954
 Seconds	1.11
	user	1.11
	system	0.02
	cuser	0
;	csystem	0