; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/09/03/peak-motifs.2025-09-03.113949_2025-09-03.113949_eRwEjV/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/09/03/peak-motifs.2025-09-03.113949_2025-09-03.113949_eRwEjV/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/09/03/peak-motifs.2025-09-03.113949_2025-09-03.113949_eRwEjV/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/09/03/peak-motifs.2025-09-03.113949_2025-09-03.113949_eRwEjV/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/09/03/peak-motifs.2025-09-03.113949_2025-09-03.113949_eRwEjV/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	20	33	127	8	1	9	5	7	8	8	22	23
c	54	44	8	134	147	140	2	1	6	13	57	59
g	59	57	13	6	1	2	140	147	134	8	44	54
t	23	22	8	8	7	5	9	1	8	127	33	20
//
; Sites	156
>site_0
AGACCCTGGTGA
>site_1
TCACCAGGGTCT
>site_2
AAACCAGGGTGG
>site_3
CCACCCTGGTTT
>site_4
CAACCCGGATCA
>site_5
TGATCCGGGTTG
>site_6
ACACACGGGTCC
>site_7
GGACCCGTGTGT
>site_8
GAACCCGGGGCT
>site_9
AGCCCCGGGTTC
>site_10
GGACCCGGGAGG
>site_11
CCTCCCGGGTCC
>site_12
CGACCAGGGTGC
>site_13
GCACCCTGGTCG
>site_14
TTCCCCGGGTTA
>site_15
TAACCCGGGGAA
>site_16
ATACCCGCGTGT
>site_17
ACACGCGGGTAT
>site_18
CTAACCGGGTTA
>site_19
TAACCCGGTTAG
>site_20
GGACCCGGGATG
>site_21
CATCCCGGGTCC
>site_22
GGACCCGGGAAG
>site_23
CTTCCCGGGTCC
>site_24
GGACCCGAGTGT
>site_25
ACACTCGGGTCC
>site_26
ATACCCGGCTGC
>site_27
GCAGCCGGGTAT
>site_28
CGACCTGGGTTG
>site_29
CAACCCAGGTCG
>site_30
TGACCCGAGTTC
>site_31
GAACTCGGGTCA
>site_32
AAACCCGGCTGG
>site_33
CCAGCCGGGTTT
>site_34
GAACCGGGGTAC
>site_35
GTACCCCGGTTC
>site_36
GTACCTGGGTCA
>site_37
TGACCCAGGTAC
>site_38
CGACCCGGGGAA
>site_39
TTCCCCGGGTCG
>site_40
ATAACCGGGTAC
>site_41
GTACCCGGTTAT
>site_42
CCACCCGGGCCT
>site_43
AGGCCCGGGTGG
>site_44
CCCCCCGGGTCC
>site_45
GGACCCGGGGGG
>site_46
CGCCCCGGGTCC
>site_47
GGACCCGGGGCG
>site_48
GAGCCCGGGTCG
>site_49
CGACCCGGGCTC
>site_50
GGGCCCGGGTCC
>site_51
GGACCCGGGCCC
>site_52
GAACCCGGGACC
>site_53
GGTCCCGGGTTC
>site_54
CCACCCGGATCC
>site_55
GGATCCGGGTGG
>site_56
GGACCCGGGCGG
>site_57
CCGCCCGGGTCC
>site_58
CCAGCCGGGTGG
>site_59
CCACCCGGCTGG
>site_60
TAAGCCGGGTCA
>site_61
TGACCCGGCTTA
>site_62
CCACCCAGGTCC
>site_63
GGACCTGGGTGG
>site_64
CAACCCTGGTCG
>site_65
CGACCAGGGTTG
>site_66
CAACCCGGCTAG
>site_67
CTAGCCGGGTTG
>site_68
CCACCCCGGTGA
>site_69
TCACCGGGGTGG
>site_70
GTACCCGGGCCG
>site_71
CGGCCCGGGTAC
>site_72
CCACCCGGTTCG
>site_73
CGAACCGGGTGG
>site_74
AGACCCGGGTTC
>site_75
GAACCCGGGTCT
>site_76
AGGCCCGGGTCC
>site_77
GGACCCGGGCCT
>site_78
GGACCCTGGTGC
>site_79
GCACCAGGGTCC
>site_80
GCAACCGGGTAC
>site_81
GTACCCGGTTGC
>site_82
TCAACCGGGTTT
>site_83
AAACCCGGTTGA
>site_84
TAACCCGGGCCC
>site_85
GGGCCCGGGTTA
>site_86
GGACCCGGGAAG
>site_87
CTTCCCGGGTCC
>site_88
GAACCCGAGTGG
>site_89
CCACTCGGGTTC
>site_90
ACGCCCGGGTGG
>site_91
CCACCCGGGCGT
>site_92
GAACCCGGATGC
>site_93
GCATCCGGGTTC
>site_94
CTAGCCGGGTGG
>site_95
CCACCCGGCTAG
>site_96
GTACCCGGATGG
>site_97
CCATCCGGGTAC
>site_98
GTACCCGGGTGA
>site_99
TCACCCGGGTAC
>site_100
CGACCAGGGTTC
>site_101
GAACCCTGGTCG
>site_102
GAACCCGAGTTG
>site_103
CAACTCGGGTTC
>site_104
GCACCCAGGTGC
>site_105
GCACCTGGGTGC
>site_106
AAACCCTGGTGG
>site_107
CCACCAGGGTTT
>site_108
GGAACCGGGTGA
>site_109
TCACCCGGTTCC
>site_110
GGACCCGGTTAG
>site_111
CTAACCGGGTCC
>site_112
CGACCCGGGAGG
>site_113
CCTCCCGGGTCG
>site_114
CCACCTGGGTCC
>site_115
GGACCCAGGTGG
>site_116
GGACCCGAGTGG
>site_117
CCACTCGGGTCC
>site_118
GGACCCTGGTGA
>site_119
TCACCAGGGTCC
>site_120
TCACCCGGGCAG
>site_121
CTGCCCGGGTGA
>site_122
CGGCCCGGGTTT
>site_123
AAACCCGGGCCG
>site_124
GAACCCGGGCCG
>site_125
CGGCCCGGGTTC
>site_126
ATACCCGGGCCG
>site_127
CGGCCCGGGTAT
>site_128
GGGCCCGGGTTC
>site_129
GAACCCGGGCCC
>site_130
TCATCCGGGTCC
>site_131
GGACCCGGATGA
>site_132
GCACCCTGGTCG
>site_133
CGACCAGGGTGC
>site_134
GTACCCGGATGA
>site_135
TCATCCGGGTAC
>site_136
CGATCCGGGTTG
>site_137
CAACCCGGATCG
>site_138
GAACCCGGATCC
>site_139
GGATCCGGGTTC
>site_140
GGACCCGGGGCC
>site_141
GGCCCCGGGTCC
>site_142
GGACCCGGGGAA
>site_143
TTCCCCGGGTCC
>site_144
CATCCCGGGTTC
>site_145
GAACCCGGGATG
>site_146
CGACCCGAGTCA
>site_147
TGACTCGGGTCG
>site_148
TAACCCGAGTCG
>site_149
CGACTCGGGTTA
>site_150
TCCCCCGGGTGC
>site_151
GCACCCGGGGGA
>site_152
AGACCCGGGACG
>site_153
CGTCCCGGGTCT
>site_154
CCACCCGGTTTT
>site_155
AAAACCGGGTGG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/03/peak-motifs.2025-09-03.113949_2025-09-03.113949_eRwEjV/results/positions_6nt//peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/03/peak-motifs.2025-09-03.113949_2025-09-03.113949_eRwEjV/results/positions_6nt//peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo_m1_rc.png
;
a	45	46	0	0	0	0	0	0	38	33
c	47	56	172	0	0	0	172	172	39	37
g	55	37	0	172	172	172	0	0	60	70
t	25	33	0	0	0	0	0	0	35	32
//
; Sites	172
>site_0
GCCGGGCCAG
>site_1
CACGGGCCAG
>site_2
TCCGGGCCCC
>site_3
AACGGGCCAG
>site_4
ATCGGGCCCC
>site_5
CCCGGGCCCG
>site_6
CTCGGGCCCG
>site_7
AACGGGCCCG
>site_8
CCCGGGCCCG
>site_9
AGCGGGCCGC
>site_10
TCCGGGCCAA
>site_11
CACGGGCCGC
>site_12
CCCGGGCCCT
>site_13
GGCGGGCCAG
>site_14
GCCGGGCCGT
>site_15
GACGGGCCAG
>site_16
CACGGGCCTC
>site_17
AGCGGGCCGG
>site_18
TACGGGCCAG
>site_19
CGCGGGCCGC
>site_20
AACGGGCCAA
>site_21
TACGGGCCTG
>site_22
GCCGGGCCTC
>site_23
CTCGGGCCAT
>site_24
AGCGGGCCGC
>site_25
AACGGGCCGC
>site_26
ATCGGGCCAT
>site_27
GCCGGGCCCA
>site_28
CCCGGGCCGG
>site_29
CTCGGGCCGT
>site_30
TGCGGGCCGC
>site_31
GTCGGGCCAG
>site_32
CCCGGGCCTC
>site_33
AGCGGGCCGG
>site_34
AGCGGGCCAG
>site_35
TGCGGGCCTC
>site_36
ACCGGGCCCA
>site_37
CGCGGGCCGG
>site_38
AGCGGGCCCA
>site_39
GCCGGGCCCG
>site_40
CCCGGGCCCG
>site_41
AGCGGGCCAG
>site_42
GACGGGCCGG
>site_43
AACGGGCCGA
>site_44
GACGGGCCGA
>site_45
GACGGGCCTG
>site_46
GGCGGGCCCC
>site_47
GTCGGGCCCG
>site_48
CCCGGGCCCG
>site_49
GTCGGGCCCT
>site_50
ATCGGGCCGA
>site_51
GCCGGGCCTG
>site_52
CACGGGCCAA
>site_53
GTCGGGCCAG
>site_54
TTCGGGCCTT
>site_55
GACGGGCCTG
>site_56
ACCGGGCCTT
>site_57
ACCGGGCCTC
>site_58
GTCGGGCCGG
>site_59
CCCGGGCCGC
>site_60
GACGGGCCGT
>site_61
CTCGGGCCTC
>site_62
TTCGGGCCTG
>site_63
TTCGGGCCTG
>site_64
AACGGGCCTG
>site_65
CCCGGGCCTT
>site_66
AACGGGCCCA
>site_67
GCCGGGCCGA
>site_68
AACGGGCCCC
>site_69
AACGGGCCAA
>site_70
GGCGGGCCGG
>site_71
TGCGGGCCTT
>site_72
GCCGGGCCGT
>site_73
TTCGGGCCAC
>site_74
CCCGGGCCGT
>site_75
GGCGGGCCAC
>site_76
AGCGGGCCGA
>site_77
CGCGGGCCTG
>site_78
CCCGGGCCCC
>site_79
ACCGGGCCCC
>site_80
GCCGGGCCCA
>site_81
GTCGGGCCTA
>site_82
ATCGGGCCGT
>site_83
AACGGGCCTG
>site_84
AGCGGGCCTT
>site_85
AACGGGCCCC
>site_86
TACGGGCCGT
>site_87
TCCGGGCCCC
>site_88
GACGGGCCGC
>site_89
GACGGGCCGA
>site_90
GCCGGGCCGC
>site_91
GACGGGCCGA
>site_92
GCCGGGCCAG
>site_93
AGCGGGCCGG
>site_94
AACGGGCCGG
>site_95
AACGGGCCAA
>site_96
GGCGGGCCGG
>site_97
GCCGGGCCGT
>site_98
TCCGGGCCTG
>site_99
TCCGGGCCCC
>site_100
TTCGGGCCGC
>site_101
CACGGGCCCG
>site_102
GTCGGGCCCG
>site_103
CTCGGGCCGG
>site_104
CCCGGGCCGG
>site_105
GGCGGGCCCC
>site_106
CACGGGCCAG
>site_107
TCCGGGCCTG
>site_108
CTCGGGCCGA
>site_109
AGCGGGCCAA
>site_110
GACGGGCCAT
>site_111
GACGGGCCTG
>site_112
GGCGGGCCAA
>site_113
TGCGGGCCGG
>site_114
AGCGGGCCGT
>site_115
TGCGGGCCGT
>site_116
GTCGGGCCTG
>site_117
ACCGGGCCAT
>site_118
GCCGGGCCCC
>site_119
GGCGGGCCTG
>site_120
GTCGGGCCAA
>site_121
CTCGGGCCCG
>site_122
GTCGGGCCCG
>site_123
GCCGGGCCTA
>site_124
CACGGGCCGG
>site_125
ATCGGGCCTG
>site_126
ACCGGGCCAT
>site_127
TCCGGGCCAG
>site_128
CCCGGGCCGT
>site_129
CCCGGGCCGG
>site_130
ACCGGGCCGA
>site_131
AACGGGCCAA
>site_132
CCCGGGCCGC
>site_133
CCCGGGCCCA
>site_134
CGCGGGCCTG
>site_135
CGCGGGCCTA
>site_136
GCCGGGCCAT
>site_137
GCCGGGCCCG
>site_138
GGCGGGCCCG
>site_139
GACGGGCCGA
>site_140
GACGGGCCCC
>site_141
ACCGGGCCCT
>site_142
AACGGGCCGG
>site_143
GACGGGCCGG
>site_144
CTCGGGCCAA
>site_145
CACGGGCCAA
>site_146
GGCGGGCCGG
>site_147
GACGGGCCGG
>site_148
CTCGGGCCTT
>site_149
GCCGGGCCAG
>site_150
CCCGGGCCAC
>site_151
GACGGGCCTC
>site_152
TTCGGGCCTT
>site_153
CACGGGCCTC
>site_154
CCCGGGCCGG
>site_155
CCCGGGCCTG
>site_156
TGCGGGCCGT
>site_157
ACCGGGCCAT
>site_158
CGCGGGCCGT
>site_159
AACGGGCCCC
>site_160
CGCGGGCCGA
>site_161
CACGGGCCAC
>site_162
TTCGGGCCGT
>site_163
ACCGGGCCGG
>site_164
ATCGGGCCAA
>site_165
AGCGGGCCGT
>site_166
GGCGGGCCGG
>site_167
TCCGGGCCAA
>site_168
TTCGGGCCCC
>site_169
GCCGGGCCCG
>site_170
CCCGGGCCCG
>site_171
CACGGGCCGG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/03/peak-motifs.2025-09-03.113949_2025-09-03.113949_eRwEjV/results/positions_6nt//peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/03/peak-motifs.2025-09-03.113949_2025-09-03.113949_eRwEjV/results/positions_6nt//peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo_m2_rc.png
;
a	34	40	0	0	0	110	0	110	25	35
c	28	28	0	110	110	0	110	0	34	35
g	17	21	0	0	0	0	0	0	29	26
t	31	21	110	0	0	0	0	0	22	14
//
; Sites	110
>site_0
AATCCACAGC
>site_1
ACTCCACAAC
>site_2
ACTCCACATG
>site_3
TCTCCACACA
>site_4
CGTCCACATG
>site_5
AATCCACATC
>site_6
TTTCCACAGG
>site_7
GTTCCACAGC
>site_8
ACTCCACATG
>site_9
TGTCCACAAC
>site_10
TCTCCACACA
>site_11
GATCCACAAA
>site_12
TTTCCACAAT
>site_13
ATTCCACATC
>site_14
TGTCCACAGA
>site_15
ACTCCACAGA
>site_16
TTTCCACATT
>site_17
AATCCACAAG
>site_18
GGTCCACACA
>site_19
TCTCCACAGG
>site_20
CATCCACACC
>site_21
CCTCCACAAC
>site_22
TCTCCACAGC
>site_23
ACTCCACAGC
>site_24
CGTCCACAAA
>site_25
GATCCACAAG
>site_26
TCTCCACAAA
>site_27
CATCCACACA
>site_28
CATCCACACA
>site_29
CATCCACACA
>site_30
CGTCCACACA
>site_31
AATCCACATC
>site_32
TCTCCACAAT
>site_33
AATCCACATG
>site_34
CATCCACAGG
>site_35
TCTCCACAAG
>site_36
AATCCACAAC
>site_37
GGTCCACAAA
>site_38
TATCCACAGC
>site_39
AATCCACACA
>site_40
CATCCACACG
>site_41
AATCCACATC
>site_42
AGTCCACAGC
>site_43
AATCCACACC
>site_44
AATCCACAGA
>site_45
ACTCCACACC
>site_46
GTTCCACAAC
>site_47
GATCCACATC
>site_48
AGTCCACACA
>site_49
CTTCCACATA
>site_50
CCTCCACAGG
>site_51
GCTCCACAGC
>site_52
CGTCCACAGA
>site_53
CATCCACACC
>site_54
ACTCCACAAC
>site_55
TCTCCACATT
>site_56
GGTCCACATC
>site_57
TGTCCACATG
>site_58
ATTCCACAGC
>site_59
TATCCACACC
>site_60
TGTCCACAAG
>site_61
TATCCACACA
>site_62
TTTCCACAAC
>site_63
TCTCCACAGG
>site_64
CCTCCACAGT
>site_65
ATTCCACACC
>site_66
CGTCCACACC
>site_67
GATCCACATG
>site_68
GATCCACACA
>site_69
CTTCCACATG
>site_70
CTTCCACACC
>site_71
ATTCCACACC
>site_72
TGTCCACAGT
>site_73
TTTCCACATA
>site_74
ATTCCACAGG
>site_75
TGTCCACACA
>site_76
CATCCACATG
>site_77
CTTCCACATA
>site_78
ATTCCACAGT
>site_79
ACTCCACAGC
>site_80
CTTCCACACA
>site_81
AGTCCACAAC
>site_82
CATCCACACA
>site_83
GATCCACAGA
>site_84
TATCCACACA
>site_85
CGTCCACACA
>site_86
TATCCACACT
>site_87
ACTCCACAGA
>site_88
AATCCACAGC
>site_89
TATCCACACT
>site_90
TGTCCACAAG
>site_91
GCTCCACAAA
>site_92
AATCCACACT
>site_93
GATCCACAAT
>site_94
GATCCACAAA
>site_95
CGTCCACACC
>site_96
TTTCCACAAG
>site_97
TTTCCACACT
>site_98
CATCCACACG
>site_99
CATCCACATG
>site_100
TTTCCACAGC
>site_101
TCTCCACAGG
>site_102
CCTCCACACA
>site_103
GATCCACAAT
>site_104
GGTCCACATG
>site_105
ACTCCACAGA
>site_106
ACTCCACAAA
>site_107
CCTCCACATG
>site_108
AATCCACACT
>site_109
AATCCACAGA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/03/peak-motifs.2025-09-03.113949_2025-09-03.113949_eRwEjV/results/positions_6nt//peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/03/peak-motifs.2025-09-03.113949_2025-09-03.113949_eRwEjV/results/positions_6nt//peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo_m3_rc.png
;
; Host name	rsat
; Job started	2025-09-03.114016
; Job done	2025-09-03.114016
; Seconds	0.12
;	user	0.12
;	system	0.04
;	cuser	0.69
;	csystem	0.12
