; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/09/15/oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/09/15/oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/09/15/oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/09/15/oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/09/15/oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	115	113	113	118	212	253	74	11	4	5	13	315	68	63	173	145	114
c	67	45	47	51	27	20	2	3	309	314	301	0	12	18	25	35	49
g	39	48	46	31	13	19	248	305	6	3	2	5	12	18	36	56	43
t	106	121	121	127	75	35	3	8	8	5	11	7	235	228	93	91	121
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m1_rc.png
;
a	114	106	101	191	273	217	14	11	10	13	292	61	50	178	123	103
c	42	47	62	32	8	3	9	280	289	285	1	13	14	18	33	56
g	48	44	37	22	9	82	276	3	1	4	4	6	23	23	58	41
t	101	108	105	60	15	3	6	11	5	3	8	225	218	86	91	105
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m2_rc.png
;
a	108	106	115	108	223	264	76	10	9	5	12	320	212	58	172	152	125
c	73	54	47	50	24	14	2	11	301	318	298	3	12	19	35	31	42
g	41	45	47	34	14	15	251	303	9	1	9	5	12	12	26	52	45
t	109	126	122	139	70	38	2	7	12	7	12	3	95	242	98	96	119
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m3_rc.png
;
a	125	108	101	271	268	8	10	4	10	7	6	113	153	141
c	49	63	33	13	12	5	3	1	25	341	298	44	25	36
g	50	33	31	25	14	1	338	351	316	3	1	45	51	56
t	134	154	193	49	64	344	7	2	7	7	53	156	129	125
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m4_rc.png
;
a	103	110	104	106	145	46	6	4	0	4	307	58	46	173	136	119
c	41	44	43	42	69	0	3	296	317	306	1	14	21	27	32	46
g	57	52	28	18	44	270	303	12	2	3	5	9	15	30	56	44
t	119	114	145	154	62	4	8	8	1	7	7	239	238	90	96	111
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m5_rc.png
;
a	118	119	129	112	192	264	72	10	5	4	12	334	72	152	153	148
c	67	56	52	49	37	24	1	7	323	329	315	0	13	27	34	37
g	39	53	49	30	18	20	267	320	4	1	5	3	8	27	41	61
t	117	113	111	150	94	33	1	4	9	7	9	4	248	135	113	95
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m6_rc.png
;
a	126	100	94	254	274	11	15	5	9	9	5	53	184	145	123
c	48	67	27	21	8	4	3	2	12	339	277	38	19	30	58
g	50	40	24	23	15	1	332	350	331	2	2	35	42	48	51
t	135	152	214	61	62	343	9	2	7	9	75	233	114	136	127
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m7_rc.png
;
a	110	119	123	113	198	254	60	11	7	7	8	337	227	166	134	145
c	65	53	55	38	33	19	2	3	314	329	314	1	13	27	49	45
g	41	45	44	30	19	22	274	319	7	1	5	1	8	18	36	62
t	125	124	119	160	91	46	5	8	13	4	14	2	93	130	122	89
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m8_rc.png
;
a	83	65	35	181	201	199	14	13	14	22	182	61	71	69
c	40	44	22	5	0	2	170	178	178	12	8	10	33	35
g	21	23	20	6	1	6	10	4	5	7	8	115	32	33
t	66	78	133	18	8	3	16	15	13	169	12	24	74	73
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m9_rc.png
;
a	106	105	114	213	66	5	7	0	3	289	49	57	201	131	119
c	42	50	66	23	1	1	277	294	290	0	13	21	15	38	43
g	53	27	19	21	227	289	6	2	1	4	6	13	21	53	42
t	99	118	101	43	6	5	10	4	6	7	232	209	63	78	96
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m10_rc.png
;
a	72	75	50	152	151	25	49	19	6	2	5	20	178	38	38	121	77	73
c	41	43	21	10	13	3	11	3	5	199	185	132	6	10	12	20	17	26
g	26	17	20	12	10	6	132	185	199	5	3	11	3	13	10	21	43	41
t	73	77	121	38	38	178	20	5	2	6	19	49	25	151	152	50	75	72
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m11_rc.png
;
a	74	98	151	141	2	9	3	7	1	2	24	47	118	111	112	103
c	57	33	28	28	4	5	0	2	296	227	7	11	31	38	39	34
g	36	37	32	19	0	283	297	291	0	1	10	22	43	45	49	68
t	136	135	92	115	297	6	3	3	6	73	262	223	111	109	103	98
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m12_rc.png
;
a	117	94	64	246	245	5	5	6	7	10	8	25	134	116	114
c	46	67	17	20	8	4	1	4	4	295	89	12	36	38	51
g	54	35	13	16	14	2	310	311	309	9	4	17	43	62	52
t	115	136	238	50	65	321	16	11	12	18	231	278	119	116	115
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m13_rc.png
;
a	97	104	107	107	223	257	70	6	3	3	6	294	115	90	131
c	67	48	44	43	22	12	1	0	288	293	279	0	24	32	37
g	33	39	37	31	8	7	226	292	2	0	5	4	19	27	32
t	102	108	111	118	46	23	2	1	6	3	9	1	141	150	99
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m14_rc.png
;
a	16	23	0	0	0	0	0	68	25	32
c	8	12	0	0	0	68	68	0	9	11
g	15	10	68	68	0	0	0	0	12	4
t	29	23	0	0	68	0	0	0	22	21
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m15_rc.png
;
a	11	24	66	66	0	0	0	0	25	17
c	16	7	0	0	66	66	0	0	12	13
g	4	14	0	0	0	0	66	66	8	6
t	35	21	0	0	0	0	0	0	21	30
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m16_rc.png
;
a	90	99	154	244	4	7	4	8	3	2	27	109	126	99	112	109
c	60	38	36	7	2	2	1	2	313	245	18	22	32	50	47	40
g	32	34	31	10	0	310	315	306	0	1	23	43	49	52	50	66
t	138	149	99	59	314	1	0	4	4	72	252	146	113	119	111	105
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m17_rc.png
;
a	112	118	123	116	179	267	71	6	5	5	5	341	211	115	152	149
c	71	54	49	45	38	20	2	1	330	338	327	0	14	36	47	46
g	40	47	52	32	27	21	268	333	0	0	5	2	15	21	38	61
t	122	126	121	152	101	37	4	5	10	2	8	2	105	173	108	89
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m18.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m18_rc.png
;
a	92	88	97	233	225	2	1	4	4	4	4	48	96	97
c	42	55	26	15	8	2	0	1	2	256	64	32	33	33
g	42	27	20	6	7	2	273	267	264	5	0	26	49	55
t	103	109	136	25	39	273	5	7	9	14	211	173	101	94
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m19.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m19_rc.png
;
a	59	67	0	0	191	0	191	191	77	73
c	15	27	0	0	0	0	0	0	23	33
g	37	27	191	0	0	0	0	0	19	19
t	80	70	0	191	0	191	0	0	72	66
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m20.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/15//oligo-analysis_2025-09-15.162810_Fa8bKA_pssm_count_matrices_logo_m20_rc.png
;
; Host name	rsat
; Job started	2025-09-15.162824
; Job done	2025-09-15.162830
; Seconds	0.3
;	user	0.3
;	system	0.17
;	cuser	5.26
;	csystem	0.72