; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/09/16/dyad-analysis_2025-09-16.133933_8nwfbO_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/www-data/2025/09/16/dyad-analysis_2025-09-16.133933_8nwfbO_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/09/16/dyad-analysis_2025-09-16.133933_8nwfbO_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/09/16/dyad-analysis_2025-09-16.133933_8nwfbO_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	1	5	18	0	0	0	0	0	5	3
c	9	4	0	18	0	18	0	0	6	5
g	3	5	0	0	18	0	18	18	0	3
t	5	4	0	0	0	0	0	0	7	7
//
a	18	21	52	0	0	19	18	26	20	15	20	17	17	16	17	17	25	18	0	52	52	19	21
c	9	8	0	0	52	5	8	8	5	13	8	6	8	9	10	13	5	11	0	0	0	9	8
g	10	7	0	52	0	8	6	8	7	8	7	7	11	9	8	10	10	9	0	0	0	11	6
t	15	16	0	0	0	20	20	10	20	16	17	22	16	18	17	12	12	14	52	0	0	13	17
//
a	193	223	66	32	22	179	210	202	195	200	43	25	571	46	200	211
c	125	90	486	12	17	98	95	124	122	102	17	25	25	20	101	100
g	73	99	36	15	8	111	100	104	101	93	16	14	21	17	108	98
t	283	262	86	615	627	286	269	244	256	279	598	610	57	591	265	265
//
a	14	16	48	0	0	15	0	48	48	15	15
c	10	9	0	48	0	5	0	0	0	8	4
g	5	9	0	0	48	6	0	0	0	10	10
t	19	14	0	0	0	22	48	0	0	15	19
//
a	32	41	92	92	92	0	0	92	37	42
c	14	18	0	0	0	0	92	0	14	14
g	20	16	0	0	0	92	0	0	9	16
t	26	17	0	0	0	0	0	0	32	20
//
a	43	36	105	0	0	30	27	38	40	38	37	33	36	26	32	35	31	0	105	0	40	33
c	17	17	0	0	0	24	18	17	9	13	14	15	18	19	17	13	13	0	0	105	13	20
g	13	19	0	0	0	16	20	22	12	10	19	12	9	20	16	16	15	0	0	0	18	15
t	32	33	0	105	105	35	40	28	44	44	35	45	42	40	40	41	46	105	0	0	34	37
//
a	38	30	90	0	90	25	40	38	28	38	31	29	41	28	24	29	27	26	29	33	21	38	0	0	0	30	31
c	8	15	0	90	0	21	16	7	10	15	19	19	11	17	14	13	13	11	23	12	13	6	0	0	0	15	13
g	13	15	0	0	0	6	13	12	23	11	13	13	14	17	11	19	19	15	10	7	16	21	0	90	0	15	8
t	31	30	0	0	0	38	21	33	29	26	27	29	24	28	41	29	31	38	28	38	40	25	90	0	90	30	38
//
a	25	18	60	0	0	23	23	16	18	16	20	19	22	17	14	0	60	0	18	18
c	9	5	0	0	0	8	6	9	5	9	4	7	9	10	7	0	0	0	5	9
g	9	15	0	60	0	4	10	13	13	14	15	9	14	18	12	60	0	0	9	8
t	17	22	0	0	60	25	21	22	24	21	21	25	15	15	27	0	0	60	28	25
//
a	1	6	0	0	0	4	0	0	0	7	4
c	6	3	17	0	0	6	0	0	17	2	3
g	6	5	0	17	0	2	17	17	0	3	3
t	4	3	0	0	17	5	0	0	0	5	7
//
; Host name	rsat
; Job started	2025-09-16.133940
; Job done	2025-09-16.133940
; Seconds	0.15
;	user	0.15
;	system	0.02
;	cuser	0
;	csystem	0