; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/09/16/oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/09/16/oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/09/16/oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/09/16/oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/09/16/oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	115	114	115	120	217	257	74	11	4	5	13	320	69	64	177	149	116
c	67	49	49	53	27	20	2	3	315	320	307	0	13	18	26	36	50
g	45	48	46	32	13	20	255	312	6	4	2	7	12	18	36	56	43
t	107	123	124	129	77	37	3	8	9	5	12	7	240	234	95	93	125
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m1_rc.png
;
a	115	109	103	194	278	221	14	12	11	13	297	62	50	181	123	104
c	44	47	63	32	8	3	9	283	293	289	1	13	14	18	35	59
g	49	44	37	22	9	83	281	3	1	5	4	6	25	25	59	41
t	102	110	107	62	15	3	6	12	5	3	8	229	221	86	93	106
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m2_rc.png
;
a	111	108	118	111	229	270	77	10	10	5	12	326	216	59	176	153	128
c	73	55	47	51	24	14	2	11	305	323	301	3	13	19	35	32	43
g	43	46	47	34	14	15	256	308	9	1	10	5	12	12	26	55	45
t	110	128	125	141	70	38	2	8	13	8	14	3	96	247	100	97	121
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m3_rc.png
;
a	127	110	101	277	273	8	10	4	11	7	6	116	155	143
c	49	63	33	13	12	7	3	2	25	347	303	45	25	37
g	51	33	32	25	14	1	344	356	321	3	1	45	52	59
t	137	158	198	49	65	348	7	2	7	7	54	158	132	125
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m4_rc.png
;
a	105	112	104	109	147	48	6	4	0	4	312	59	46	179	140	122
c	44	46	45	43	71	0	3	302	323	313	1	15	21	28	32	47
g	57	52	29	18	45	275	310	12	3	3	7	9	15	30	56	44
t	121	117	149	157	64	4	8	9	1	7	7	244	245	90	99	114
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m5_rc.png
;
a	118	120	130	113	194	267	73	10	5	4	12	338	72	153	154	150
c	67	58	52	49	37	24	1	7	326	333	319	0	14	27	35	38
g	42	53	49	30	18	21	270	324	4	1	5	3	8	28	42	61
t	118	114	114	153	96	33	1	4	10	7	9	4	251	137	114	96
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m6_rc.png
;
a	129	102	94	260	282	11	15	5	10	9	6	55	189	148	126
c	48	67	29	23	8	6	3	3	12	347	282	39	19	31	58
g	53	42	25	23	15	1	339	357	338	2	2	35	42	50	53
t	137	156	219	61	62	349	10	2	7	9	77	238	117	138	130
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m7_rc.png
;
a	110	120	125	116	200	256	60	11	7	7	8	340	229	168	134	146
c	65	54	55	38	33	19	2	3	317	332	316	1	14	27	49	47
g	42	46	44	30	19	23	277	322	7	1	5	1	8	18	37	62
t	127	124	120	160	92	46	5	8	13	4	15	2	93	131	124	89
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m8_rc.png
;
a	83	67	35	183	203	201	14	13	14	22	184	62	72	69
c	42	44	22	5	0	2	172	180	180	12	8	10	33	35
g	21	23	22	6	1	6	10	4	5	7	8	116	32	34
t	66	78	133	18	8	3	16	15	13	171	12	24	75	74
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m9_rc.png
;
a	107	105	117	215	66	5	7	0	3	292	49	57	205	134	121
c	44	52	66	23	1	1	281	298	295	0	13	21	16	38	44
g	53	28	19	22	232	294	6	3	1	6	6	13	21	53	42
t	101	120	103	45	6	5	11	4	6	7	237	214	63	80	98
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m10_rc.png
;
a	73	76	50	155	153	25	50	19	6	2	5	20	182	39	39	123	78	73
c	42	43	22	10	13	3	11	4	5	203	188	135	6	11	12	21	19	28
g	28	19	21	12	11	6	135	188	203	5	4	11	3	13	10	22	43	42
t	73	78	123	39	39	182	20	5	2	6	19	50	25	153	155	50	76	73
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m11_rc.png
;
a	75	100	153	142	2	10	3	8	1	2	24	47	120	113	113	104
c	57	33	29	29	4	5	0	2	300	230	7	12	31	38	39	36
g	37	37	32	20	0	286	301	294	0	1	10	22	43	46	50	68
t	138	137	93	116	301	6	3	3	6	74	266	226	113	110	105	99
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m12_rc.png
;
a	119	97	64	252	250	5	5	6	8	10	9	26	139	121	118
c	46	67	19	23	9	4	1	5	4	304	91	12	37	39	51
g	57	37	13	16	15	2	318	319	317	9	4	19	45	63	53
t	119	140	245	50	67	330	17	11	12	18	237	284	120	118	119
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m13_rc.png
;
a	97	105	108	109	226	260	70	6	3	3	6	297	116	91	132
c	67	49	44	43	22	12	1	0	290	296	281	0	25	32	37
g	35	39	37	31	8	7	229	295	2	0	5	4	19	27	32
t	103	109	113	119	46	23	2	1	7	3	10	1	142	152	101
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m14_rc.png
;
a	17	24	0	0	0	0	0	69	25	32
c	8	12	0	0	0	69	69	0	9	11
g	15	10	69	69	0	0	0	0	12	4
t	29	23	0	0	69	0	0	0	23	22
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m15_rc.png
;
a	11	24	66	66	0	0	0	0	25	17
c	16	7	0	0	66	66	0	0	12	13
g	4	14	0	0	0	0	66	66	8	6
t	35	21	0	0	0	0	0	0	21	30
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m16_rc.png
;
a	92	100	157	249	4	7	4	9	3	2	27	113	129	102	114	110
c	60	40	38	7	2	2	2	2	319	249	19	22	33	50	47	44
g	34	35	31	11	0	316	320	311	0	1	23	43	49	52	53	66
t	140	151	100	59	320	1	0	4	4	74	257	148	115	122	112	106
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m17_rc.png
;
a	112	119	125	119	182	270	71	6	5	5	5	345	213	117	153	150
c	71	55	49	45	38	20	2	1	333	342	330	0	15	36	47	48
g	42	48	52	32	27	22	272	337	0	0	5	2	15	21	39	61
t	124	127	123	153	102	37	4	5	11	2	9	2	106	175	110	90
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m18.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m18_rc.png
;
a	59	67	0	0	192	0	192	192	78	73
c	15	28	0	0	0	0	0	0	23	34
g	38	27	192	0	0	0	0	0	19	19
t	80	70	0	192	0	192	0	0	72	66
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m19.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m19_rc.png
;
a	94	89	97	237	228	2	1	4	4	4	4	49	100	101
c	42	55	28	17	8	2	0	1	2	262	65	33	33	33
g	44	29	21	6	8	2	279	273	270	5	0	28	51	56
t	105	112	139	25	41	279	5	7	9	14	216	175	101	95
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m20.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.144002_THbGSF_pssm_count_matrices_logo_m20_rc.png
;
; Host name	rsat
; Job started	2025-09-16.144017
; Job done	2025-09-16.144023
; Seconds	0.36
;	user	0.36
;	system	0.19
;	cuser	5.26
;	csystem	0.83