; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/09/16/oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/09/16/oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/09/16/oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/09/16/oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/09/16/oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	74	73	49	205	11	213	16	18	3	17	145	64	74	83
c	41	41	33	14	208	4	190	3	5	171	16	50	56	37
g	46	36	101	1	2	3	4	198	1	30	18	48	30	40
t	68	79	46	9	8	9	19	10	220	11	50	67	69	69
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m1_rc.png
;
a	45	38	37	9	5	123	5	4	3	2	9	39	44	40
c	24	16	21	8	11	0	114	2	0	5	1	36	23	30
g	18	36	27	7	100	2	3	115	1	116	104	18	19	22
t	42	39	44	105	13	4	7	8	125	6	15	36	43	37
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m2_rc.png
;
a	64	91	48	225	11	235	11	15	6	144	25	157	85	88
c	42	32	53	13	211	5	209	4	2	21	15	27	35	43
g	53	33	100	2	7	1	3	219	0	50	22	27	29	40
t	84	87	42	3	14	2	20	5	235	28	181	32	94	72
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m3_rc.png
;
a	38	39	24	14	7	130	1	7	1	5	76	25	42	50
c	26	12	17	13	9	1	120	1	1	4	7	16	21	29
g	25	41	22	8	110	1	1	119	0	118	23	6	21	16
t	45	42	71	99	8	2	12	7	132	7	28	87	50	39
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m4_rc.png
;
a	69	91	76	225	14	253	11	11	5	21	12	63	89	87
c	58	42	51	17	213	1	234	4	1	12	6	70	38	46
g	46	38	70	6	12	1	4	234	1	213	17	51	42	58
t	87	89	63	12	21	5	11	11	253	14	225	76	91	69
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m5_rc.png
;
a	216	244	617	44	29	607	611	27	89	451	246	236
c	118	133	10	544	22	12	8	9	388	46	99	93
g	91	100	9	19	10	9	8	5	45	43	82	114
t	222	170	11	40	586	19	20	606	125	107	220	204
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m6_rc.png
;
a	28	37	21	24	12	131	12	14	8	116	9	119	47	61
c	25	21	9	95	112	3	115	6	5	2	4	4	22	18
g	40	18	95	5	0	3	2	111	3	17	12	9	19	22
t	46	63	14	15	15	2	10	8	123	4	114	7	51	38
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m7_rc.png
;
a	40	37	0	0	0	122	0	122	36	41
c	21	27	0	0	0	0	122	0	30	19
g	16	20	122	0	122	0	0	0	16	30
t	45	38	0	122	0	0	0	0	40	32
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m8_rc.png
;
a	248	253	581	94	59	587	599	44	46	578	127	52	211	232
c	108	118	20	417	31	24	11	28	25	14	44	29	100	94
g	94	100	29	44	14	25	28	11	24	31	417	20	118	108
t	232	211	52	127	578	46	44	599	587	59	94	581	253	248
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m9_rc.png
;
a	70	78	98	188	7	200	15	18	5	18	145	76	72	74
c	36	38	33	11	189	2	177	3	4	155	14	38	54	38
g	46	32	33	1	5	3	3	182	1	29	14	35	24	33
t	58	62	46	10	9	5	15	7	200	8	37	61	60	65
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m10_rc.png
;
a	205	189	378	129	386	361	78	366	464	23	20	452	71	43	158	170
c	85	83	39	232	33	38	38	36	6	12	10	5	22	17	69	77
g	83	71	26	49	19	32	28	40	8	11	15	18	352	12	88	91
t	140	170	70	103	75	82	369	71	35	467	468	38	68	441	198	175
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m11_rc.png
;
a	202	213	46	68	30	30	519	11	36	200	191
c	91	91	456	443	5	14	15	16	489	95	97
g	95	75	24	18	11	5	13	6	15	70	69
t	195	204	57	54	537	534	36	550	43	218	226
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m12_rc.png
;
a	73	112	108	246	10	8	4	4	5	39	92	91
c	42	47	66	0	231	2	2	4	1	125	33	43
g	63	34	31	0	3	231	2	229	5	35	40	38
t	72	57	45	4	6	9	242	13	239	51	85	78
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m13_rc.png
;
a	156	141	346	339	16	343	33	22	341	39	129	157
c	57	66	8	8	9	4	13	1	3	12	45	57
g	57	50	8	10	5	11	303	6	8	279	62	52
t	105	118	13	18	345	17	26	346	23	45	139	109
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m14_rc.png
;
a	41	38	37	12	5	125	5	5	2	3	9	53	41	42
c	26	18	21	7	7	0	114	2	2	5	1	24	27	33
g	20	36	27	7	108	2	3	116	1	117	103	18	18	21
t	44	39	46	105	11	4	9	8	126	6	18	36	45	35
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m15_rc.png
;
a	312	383	856	119	70	914	895	50	40	711	298	334	337
c	154	155	30	670	33	18	16	17	42	49	311	139	154
g	147	154	28	46	10	11	24	11	23	49	119	147	123
t	359	280	58	137	859	29	37	894	867	163	244	352	358
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m16_rc.png
;
a	20	19	58	0	0	0	58	0	24	19
c	9	13	0	58	58	0	0	58	15	8
g	14	15	0	0	0	58	0	0	3	7
t	15	11	0	0	0	0	0	0	16	24
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m17_rc.png
;
a	53	60	32	156	8	165	6	17	1	15	41	48	52
c	34	30	16	8	160	4	152	1	2	125	65	39	42
g	36	26	101	2	3	1	4	147	1	24	18	36	23
t	51	58	25	8	3	4	12	9	170	10	50	51	57
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m18.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m18_rc.png
;
a	32	47	6	10	9	123	9	1	15	55	51
c	46	23	107	1	1	2	112	122	5	15	26
g	15	17	4	113	4	2	2	3	104	24	16
t	38	44	14	7	117	4	8	5	7	37	38
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m19.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m19_rc.png
;
a	40	39	0	0	112	0	0	112	45	32
c	24	19	112	112	0	112	0	0	22	26
g	19	15	0	0	0	0	0	0	17	13
t	29	39	0	0	0	0	112	0	28	41
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m20.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.153346_rvs9dY_pssm_count_matrices_logo_m20_rc.png
;
; Host name	rsat
; Job started	2025-09-16.153359
; Job done	2025-09-16.153405
; Seconds	0.37
;	user	0.37
;	system	0.13
;	cuser	5.01
;	csystem	0.83