; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/09/16/oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/09/16/oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/09/16/oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_links.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/09/16/oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices.tf
; Input format tf
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/09/16/oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_links.txt
; Output format tab
; pseudo-weight 1
a 79 77 133 144 138 37 13 9 7 17 222 32 48 83 71
c 43 48 24 20 16 4 2 208 214 203 4 9 21 42 51
g 39 43 22 13 36 188 214 6 4 1 3 3 23 16 44
t 74 67 56 58 45 6 6 12 10 14 6 191 143 94 69
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m1_rc.png
;
a 71 79 66 28 208 18 220 16 20 10 29 16 151 120 76 96
c 31 54 29 30 8 182 1 192 8 5 7 4 27 21 27 38
g 38 27 21 27 4 7 5 8 192 1 182 8 30 29 54 31
t 96 76 120 151 16 29 10 20 16 220 18 208 28 66 79 71
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m2_rc.png
;
a 21 26 6 6 64 7 74 3 10 3 7 6 21 25
c 16 21 7 4 9 65 1 71 4 63 2 54 19 13
g 17 12 4 2 1 3 3 1 58 3 67 4 16 7
t 25 20 62 67 5 4 1 4 7 10 3 15 23 34
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m3_rc.png
;
a 69 77 91 188 12 8 9 5 226 31 41 88 71
c 42 32 25 0 3 205 221 222 0 9 25 32 42
g 32 37 82 40 204 6 2 1 3 2 16 28 47
t 91 88 36 6 15 15 2 6 5 192 152 86 74
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m4_rc.png
;
a 28 25 26 13 76 4 97 4 3 2 4 7 13 36 31
c 19 22 16 5 9 88 0 86 5 4 5 4 71 19 20
g 16 17 15 11 6 4 1 1 88 1 80 62 5 12 21
t 36 35 42 70 8 3 1 8 3 92 10 26 10 32 27
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m5_rc.png
;
a 241 228 37 573 582 79 46 592 591 40 187 220 234
c 87 93 17 6 16 25 11 11 13 9 97 92 101
g 95 104 15 10 9 425 11 11 6 18 100 89 87
t 208 206 562 42 24 102 563 17 21 564 247 230 209
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m6_rc.png
;
a 10 8 7 4 32 2 40 1 1 0 1 1 9 12 6
c 9 10 6 0 2 34 0 35 2 28 0 5 26 7 12
g 6 10 2 2 1 1 0 0 34 1 39 27 1 5 10
t 15 12 25 34 5 3 0 4 3 11 0 7 4 16 12
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m7_rc.png
;
a 23 21 64 0 0 64 0 0 26 12
c 16 11 0 64 0 0 64 0 12 20
g 7 20 0 0 64 0 0 64 9 12
t 18 12 0 0 0 0 0 0 17 20
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m8_rc.png
;
a 116 126 20 6 26 25 369 39 392 371 151 150
c 68 64 10 5 330 9 9 17 9 11 71 78
g 78 71 11 9 17 9 9 330 5 10 64 68
t 150 151 371 392 39 369 25 26 6 20 126 116
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m9_rc.png
;
a 26 40 0 0 0 0 92 92 32 24
c 27 13 92 0 0 0 0 0 11 17
g 10 13 0 92 0 92 0 0 21 18
t 29 26 0 0 92 0 0 0 28 33
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m10_rc.png
;
a 65 67 7 10 8 9 203 15 202 40 69 71 70
c 31 41 3 1 195 5 4 6 3 149 37 43 33
g 40 34 2 4 5 3 3 182 2 10 33 30 36
t 83 77 207 204 11 202 9 16 12 20 80 75 80
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m11_rc.png
;
a 84 89 134 207 22 226 18 21 11 13 19 132 148 74 95
c 58 37 31 14 195 1 199 4 8 4 5 33 16 35 32
g 36 34 35 4 9 8 4 198 3 205 13 26 26 54 40
t 62 80 40 15 14 5 19 17 218 18 203 49 50 77 73
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m12_rc.png
;
a 62 67 0 0 195 195 0 195 96 75
c 22 46 195 195 0 0 0 0 21 23
g 54 23 0 0 0 0 0 0 26 31
t 57 59 0 0 0 0 195 0 52 66
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m13_rc.png
;
a 33 28 58 24 71 95 3 12 7 8 2 31 34
c 19 18 14 10 8 0 87 2 76 2 83 20 18
g 15 16 8 4 7 2 1 81 4 79 1 19 12
t 30 35 17 59 11 0 6 2 10 8 11 27 33
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m14_rc.png
;
a 137 150 95 46 392 13 406 25 36 10 184 143 151
c 65 79 49 34 10 387 2 347 9 7 48 52 74
g 63 64 41 33 6 3 6 10 360 5 100 62 72
t 164 136 244 316 21 26 15 47 24 407 97 172 132
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m15_rc.png
;
a 118 106 0 306 306 306 306 0 129 115
c 41 56 306 0 0 0 0 0 50 53
g 48 44 0 0 0 0 0 306 48 58
t 99 100 0 0 0 0 0 0 79 80
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m16_rc.png
;
a 56 55 155 0 0 155 0 155 59 46
c 30 17 0 0 0 0 0 0 21 26
g 31 29 0 155 0 0 155 0 31 27
t 38 54 0 0 155 0 0 0 44 56
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m17_rc.png
;
a 53 56 32 29 153 7 173 13 18 4 14 39 107 64 57
c 26 46 21 8 11 165 4 154 0 7 1 11 27 34 36
g 40 33 16 23 8 5 4 2 160 0 162 85 16 29 46
t 68 52 118 127 15 10 6 18 9 176 10 52 37 60 48
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m18.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m18_rc.png
;
a 41 32 7 9 9 2 4 3 16 62 26 47 35
c 12 27 3 89 5 92 3 1 7 7 44 14 23
g 18 25 91 1 88 1 94 0 24 12 20 19 18
t 33 20 3 5 2 9 3 100 57 23 14 24 28
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m19.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m19_rc.png
;
a 67 72 128 146 153 30 15 9 8 14 214 45 106 80 71
c 41 42 18 12 12 2 8 189 198 187 0 15 25 41 52
g 34 37 18 14 17 179 188 6 3 5 0 6 26 18 36
t 73 64 51 43 33 4 4 11 6 9 1 149 58 76 56
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m20.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/16//oligo-analysis_2025-09-16.155119_OnvVuW_pssm_count_matrices_logo_m20_rc.png
;
; Host name rsat
; Job started 2025-09-16.155133
; Job done 2025-09-16.155139
; Seconds 0.29
; user 0.29
; system 0.17
; cuser 5.11
; csystem 0.81