RSAT - position-analysis result

Analysis: result (16/09/2025 13:37)

Command: position-analysis -i $RSAT/public_html/tmp/www-data/2025/09/16/retrieve-seq_2025-09-16.133516_Ude4QN.fasta.fasta.purged -v 1 -sort -nofilter -lth_occ 1 -lth_sig 0 -max_asmb_per_cluster 5 -return chi,sig,rank,distrib,matrices,index -1str -noov -l 6 -ci 20 -origin start -o $RSAT/public_html/tmp/www-data/2025/09/16/position-analysis_2025-09-16.133748_yzjJ35/position-analysis.tab

Input files

TypeFile
sequences../retrieve-seq_2025-09-16.133516_Ude4QN.fasta.fasta.purged

Output files

TypeFile
outputposition-analysis.tab
assemblyposition-analysis_pssm.asmb
sig_matricesposition-analysis_pssm_sig_matrices.tf
count_matricesposition-analysis_pssm_count_matrices.tf

Directories

TypeDirectory
output.