; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/09/18/oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/09/18/oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/09/18/oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/09/18/oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/09/18/oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	3	1	2	4	3	3	2	3	1	1	0	0	0	1	0	1	1	0	2	1	0	2	3	3	5	3
c	7	6	4	3	5	7	2	9	13	0	15	13	1	14	3	0	14	2	2	11	6	6	6	7	4	3
g	3	4	7	6	6	6	11	2	2	14	0	3	14	1	13	15	0	13	9	2	7	5	3	4	6	7
t	3	5	3	3	2	0	1	2	0	1	1	0	1	0	0	0	1	1	3	2	3	3	4	2	1	3
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m1_rc.png
;
a	4	7	2	2	9	0	2	1	0	2	0	0	1	3	0	0	4	2	2
c	8	6	14	1	6	18	0	17	20	0	17	20	0	8	16	1	6	10	6
g	8	5	4	18	4	3	17	3	0	18	3	1	20	3	4	20	7	7	11
t	1	3	1	0	2	0	2	0	1	1	1	0	0	7	1	0	4	2	2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m2_rc.png
;
a	3	1	1	1	1	6	1	0	0	0	1	1	1	0	7	2	2	4
c	8	5	10	15	3	1	15	0	4	15	1	1	16	1	3	7	3	4
g	5	10	4	1	13	8	0	17	13	0	15	14	0	15	3	6	12	7
t	1	1	2	0	0	2	1	0	0	2	0	1	0	1	4	2	0	2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m3_rc.png
;
a	2	6	1	2	5	0	1	1	0	1	2	0	1	2	1	1	3	1	1	2	1	2	4	2
c	1	9	15	2	9	18	1	13	19	1	10	19	0	6	17	0	3	17	1	4	15	2	1	15
g	15	1	2	15	4	1	17	3	0	17	6	0	19	10	1	19	13	1	18	9	2	15	9	1
t	2	4	2	1	2	1	1	3	1	1	2	1	0	2	1	0	1	1	0	5	2	1	6	2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m4_rc.png
;
a	2	10	1	1	0	18	0	0	0	16	2	3
c	2	3	0	15	0	0	0	18	2	1	3	11
g	11	3	1	2	18	0	0	0	15	0	3	2
t	3	2	16	0	0	0	18	0	1	1	10	2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m5_rc.png
;
a	0	3	0	7	0	0	0	0	0	3	1	1	3
c	3	3	7	0	0	0	0	8	0	2	3	5	1
g	4	1	1	1	0	8	8	0	8	0	2	2	3
t	1	1	0	0	8	0	0	0	0	3	2	0	1
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m6_rc.png
;
a	5	6	0	0	0	19	1	1	0	17	7	4
c	8	5	1	1	18	0	0	1	19	2	2	3
g	3	2	2	19	1	0	0	18	1	1	5	8
t	4	7	17	0	1	1	19	0	0	0	6	5
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m7_rc.png
;
a	3	1	2	1	1	5	0	0	1	0	1	0	2	0	5	3	3	4
c	7	6	11	15	4	3	17	0	3	16	0	2	17	0	8	10	2	6
g	7	11	4	3	14	8	0	19	15	0	18	17	0	18	3	4	12	6
t	2	1	2	0	0	3	2	0	0	3	0	0	0	1	3	2	2	3
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m8_rc.png
;
a	5	3	0	13	2	0	13	0	0	4	1
c	1	5	2	0	0	12	0	13	9	3	4
g	2	3	11	0	11	0	0	0	4	3	3
t	5	2	0	0	0	1	0	0	0	3	5
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m9_rc.png
;
a	0	0	0	0	0	1	1	0	9	1	2	4
c	4	6	1	0	10	0	9	10	0	7	6	1
g	4	2	1	10	0	9	0	0	0	1	1	4
t	2	2	8	0	0	0	0	0	1	1	1	1
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m10_rc.png
;
a	0	1	0	9	0	0	0	9	2	1
c	4	3	9	0	0	9	9	0	2	3
g	3	1	0	0	0	0	0	0	3	1
t	2	4	0	0	9	0	0	0	2	4
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m11_rc.png
;
a	1	0	0	0	0	7	0	0	2	4
c	1	5	7	7	7	0	0	7	4	0
g	3	2	0	0	0	0	0	0	0	3
t	2	0	0	0	0	0	7	0	1	0
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m12_rc.png
;
a	5	1	1	10	0	0	5	0	2	1	0	0	2	1	2	3	1
c	7	10	16	0	20	3	4	22	0	1	22	3	4	17	10	5	14
g	6	10	4	9	1	19	13	0	20	20	0	18	4	2	9	9	3
t	4	1	1	3	1	0	0	0	0	0	0	1	12	2	1	5	4
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m13_rc.png
;
a	6	4	0	0	0	0	0	7	0	2
c	1	2	0	0	0	0	0	0	2	1
g	0	0	7	7	0	7	7	0	3	2
t	0	1	0	0	7	0	0	0	2	2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m14_rc.png
;
a	2	4	8	0	1	8	1	1	1	1	1	1	2	0	2	0	1	7	2
c	12	9	6	25	4	4	24	2	3	23	0	4	22	4	4	22	6	4	12
g	10	11	7	1	21	10	0	23	20	0	24	19	0	21	7	1	17	8	8
t	2	2	5	0	0	4	1	0	2	2	1	2	2	1	13	3	2	7	4
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m15_rc.png
;
a	4	10	2	3	15	1	1	0	1	1	2	0	1	9	5	1	7	2
c	10	11	17	2	8	27	0	28	30	0	22	28	1	14	15	8	10	14
g	17	8	12	27	6	5	31	5	1	32	5	4	31	5	12	23	10	12
t	2	4	2	1	4	0	1	0	1	0	4	1	0	5	1	1	6	5
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m16_rc.png
;
a	4	2	2	5	0	1	8	0	0	2	1	1	0	2	0	2	1	1	5	1
c	7	11	12	6	25	4	3	24	1	3	22	1	4	21	4	4	20	6	4	11
g	7	9	9	8	0	20	10	0	24	19	0	22	18	0	20	6	2	16	9	8
t	7	3	2	6	0	0	4	1	0	1	2	1	3	2	1	13	2	2	7	5
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m17_rc.png
;
a	2	1	5	0	1	9	1	2	2	0	1	2	2	0	2	1	3	2	0	0	4	1	2	1	2	3
c	9	5	9	15	4	5	19	2	6	17	1	4	18	0	12	17	0	10	16	0	2	14	3	5	12	6
g	6	12	5	3	14	2	0	16	10	0	17	12	0	18	4	1	17	6	2	19	5	4	15	9	5	9
t	3	2	1	2	1	4	0	0	2	3	1	2	0	2	2	1	0	2	2	1	9	1	0	5	1	2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m18.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m18_rc.png
;
a	2	3	4	0	2	9	1	1	3	1	3	2	0	0	4	0	2	5	2	1
c	13	6	12	20	0	6	19	0	14	18	0	15	20	0	5	18	0	3	11	6
g	6	10	3	0	19	4	1	18	4	1	17	3	1	20	3	3	19	9	6	12
t	0	2	2	1	0	2	0	2	0	1	1	1	0	1	9	0	0	4	2	2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m19.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m19_rc.png
;
a	3	0	2	8	1	0	1	0	2	0	0	0	2	0	0	2	1	1
c	5	13	6	3	16	0	13	16	0	12	16	0	9	13	1	4	8	6
g	5	2	9	3	0	16	3	0	14	4	1	17	0	4	16	9	6	9
t	4	2	0	3	0	1	0	1	1	1	0	0	6	0	0	2	2	1
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m20.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.054354_HuXbuU_pssm_count_matrices_logo_m20_rc.png
;
; Host name	rsat
; Job started	2025-09-18.054405
; Job done	2025-09-18.054411
; Seconds	0.24
;	user	0.24
;	system	0.14
;	cuser	4.93
;	csystem	0.68