; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/09/18/oligo-analysis_2025-09-18.105301_h28U1M_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/09/18/oligo-analysis_2025-09-18.105301_h28U1M_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/09/18/oligo-analysis_2025-09-18.105301_h28U1M_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/09/18/oligo-analysis_2025-09-18.105301_h28U1M_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/09/18/oligo-analysis_2025-09-18.105301_h28U1M_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	3	4	12	2	0	0	0	0	0	0	3	7
c	3	0	0	0	0	0	0	0	9	12	2	2
g	2	3	0	9	12	12	0	0	1	0	1	1
t	4	5	0	1	0	0	12	12	2	0	6	2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.105301_h28U1M_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.105301_h28U1M_pssm_count_matrices_logo_m1_rc.png
;
a	29	24	64	60	9	4	61	3	2	27	29
c	13	15	0	1	50	3	0	2	57	10	6
g	9	9	1	0	4	59	4	1	2	13	7
t	16	19	2	6	4	1	2	61	6	17	25
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.105301_h28U1M_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.105301_h28U1M_pssm_count_matrices_logo_m2_rc.png
;
a	5	7	2	9	11	0	0	0	0	1	3	5
c	0	0	9	0	0	11	0	1	11	0	1	2
g	2	1	0	2	0	0	11	0	0	10	3	0
t	4	3	0	0	0	0	0	10	0	0	4	4
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.105301_h28U1M_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.105301_h28U1M_pssm_count_matrices_logo_m3_rc.png
;
; Host name	rsat
; Job started	2025-09-18.105307
; Job done	2025-09-18.105308
; Seconds	0.12
;	user	0.12
;	system	0.03
;	cuser	0.77
;	csystem	0.11