; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/09/18/oligo-analysis_2025-09-18.111104_c2UMgH_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/09/18/oligo-analysis_2025-09-18.111104_c2UMgH_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/09/18/oligo-analysis_2025-09-18.111104_c2UMgH_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/09/18/oligo-analysis_2025-09-18.111104_c2UMgH_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/09/18/oligo-analysis_2025-09-18.111104_c2UMgH_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	23	23	3	7	3	3	10	2	90	97	46	30	17
c	15	25	88	80	1	81	7	93	0	1	18	16	20
g	14	15	2	7	1	1	80	1	6	0	9	4	11
t	46	35	5	4	93	13	1	2	2	0	25	48	50
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.111104_c2UMgH_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.111104_c2UMgH_pssm_count_matrices_logo_m1_rc.png
;
a	17	9	36	1	2	3	0	4	2	0	14	10
c	6	7	0	32	31	0	0	2	30	1	3	7
g	3	7	0	1	2	31	0	30	0	33	7	4
t	10	13	0	2	1	2	36	0	4	2	12	15
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.111104_c2UMgH_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.111104_c2UMgH_pssm_count_matrices_logo_m2_rc.png
;
a	90	95	211	22	7	7	36	207	212	14	62	61
c	45	39	1	180	198	190	5	1	0	13	53	37
g	30	39	1	6	2	8	158	4	1	6	29	44
t	52	44	4	9	10	12	18	5	4	184	73	75
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.111104_c2UMgH_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.111104_c2UMgH_pssm_count_matrices_logo_m3_rc.png
;
a	129	117	19	27	33	27	372	367	368	367	154	153
c	62	48	5	272	15	15	3	5	1	3	65	58
g	55	64	10	29	310	321	3	4	4	1	68	67
t	139	156	351	57	27	22	7	9	12	14	98	107
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.111104_c2UMgH_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/09/18//oligo-analysis_2025-09-18.111104_c2UMgH_pssm_count_matrices_logo_m4_rc.png
;
; Host name	rsat
; Job started	2025-09-18.111110
; Job done	2025-09-18.111111
; Seconds	0.12
;	user	0.12
;	system	0.05
;	cuser	0.98
;	csystem	0.18