; matrix-scan  -quick -v 1 -seq_format fasta -i $RSAT/public_html/tmp/www-data/2025/09/18/peak-motifs.2025-09-18.095753_2025-09-18.095753_7F5dVY/data/sequences/peak-motifs_test.fasta -matrix_format transfac -m $RSAT/public_html/tmp/www-data/2025/09/18/peak-motifs.2025-09-18.095753_2025-09-18.095753_7F5dVY/results/discovered_motifs/dyads_test_vs_ctrl_m1/peak-motifs_dyads_test_vs_ctrl_m1.tf -bg_format inclusive -bgfile $RSAT/public_html/tmp/www-data/2025/09/18/peak-motifs.2025-09-18.095753_2025-09-18.095753_7F5dVY/results/composition/peak-motifs_test_inclusive-1str-ovlp_2nt.txt -pseudo 1 -2str -decimals 1 -bg_pseudo 0.01 -n score -lth score 7.5 -origin center -offset 0 -return sites -o $RSAT/public_html/tmp/www-data/2025/09/18/peak-motifs.2025-09-18.095753_2025-09-18.095753_7F5dVY/results/discovered_motifs/dyads_test_vs_ctrl_m1/peak-motifs_dyads_test_vs_ctrl_m1_sites.tab
; Quick counting mode           
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/09/18/peak-motifs.2025-09-18.095753_2025-09-18.095753_7F5dVY/data/sequences/peak-motifs_test.fasta
;	bg	/var/www/html/rsat/public_html/tmp/www-data/2025/09/18/peak-motifs.2025-09-18.095753_2025-09-18.095753_7F5dVY/results/composition/peak-motifs_test_inclusive-1str-ovlp_2nt.txt
; Matrix files
;	matrix 1	/var/www/html/rsat/public_html/tmp/www-data/2025/09/18/peak-motifs.2025-09-18.095753_2025-09-18.095753_7F5dVY/results/discovered_motifs/dyads_test_vs_ctrl_m1/peak-motifs_dyads_test_vs_ctrl_m1.tf
; Sequence format      	fasta
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/09/18/peak-motifs.2025-09-18.095753_2025-09-18.095753_7F5dVY/results/discovered_motifs/dyads_test_vs_ctrl_m1/peak-motifs_dyads_test_vs_ctrl_m1_sites.tab
; Pseudo counts        	1
; Background model
;	Method        	file
;	Markov order  	1
;	Strand        	undef
;	Background pseudo-frequency	0.01
;	Residue probabilities
;		a	0.26985
;		c	0.23075
;		g	0.23198
;		t	0.26741
; Thresholds	lower	upper
;	score 	7.5  	NA
; Output columns
;	1	seq_id
;	2	ft_type
;	3	ft_name
;	4	strand
;	5	start
;	6	end
;	7	sequence
;	8	weight
#seq_id	ft_type	ft_name	strand	start	end	sequence	weight
1:55760127-55760328	site	dyads_test_vs_ctrl_m1	R	6	34	ATTCTAAATCGTACCCTTATACTCTCAGA	7.6
1:60692064-60692265	site	dyads_test_vs_ctrl_m1	R	29	57	TTCCATTGGTCTACTTGTCTGTCTCTATA	8.1
1:86530380-86530581	site	dyads_test_vs_ctrl_m1	D	10	38	TTCCAGTAACTTTTGTGTATGTACCTAGC	8.6
1:114228420-114228621	site	dyads_test_vs_ctrl_m1	R	69	97	AAACTGCAGCCCAGGCTACTATACCCAGC	9.4
1:133659276-133659477	site	dyads_test_vs_ctrl_m1	D	55	83	TCTCTTTATTCGCTCCTTCTGCCACCATC	8.7
1:149343933-149344134	site	dyads_test_vs_ctrl_m1	R	-64	-36	AATCATTAACTATTATTTTTGTACTTATA	9.4
1:186968934-186969135	site	dyads_test_vs_ctrl_m1	R	49	77	TCTCAGAAGTAGACCCAACTCTTCCTACG	8.3
10:56497479-56497680	site	dyads_test_vs_ctrl_m1	R	-65	-37	CTTCATAGTTCATTGCTTCTGCCTCTACG	9.9
10:59807493-59807694	site	dyads_test_vs_ctrl_m1	R	7	35	TTTTAAAACCTTCTGCTACCATATCCACC	8.6
10:67185981-67186182	site	dyads_test_vs_ctrl_m1	D	-11	17	GTTCTGTGGTCTTGGCTTTTCTTCCTATA	9.0
10:73202476-73202677	site	dyads_test_vs_ctrl_m1	R	-88	-60	CTACCATATTGTCCTCTTCTTCCTCCATA	7.7
10:120923653-120923854	site	dyads_test_vs_ctrl_m1	D	29	57	ATACAGAAAGATTGGTTACTTTATATATT	9.7
10:129665038-129665239	site	dyads_test_vs_ctrl_m1	R	72	100	ACACATCAATCGTATCTTCATCCTCCATT	8.0
11:12142380-12142581	site	dyads_test_vs_ctrl_m1	R	11	39	AAATAGAAGTAGAAGGTACTCTACCCAAC	8.2
11:31934624-31934825	site	dyads_test_vs_ctrl_m1	D	-75	-47	CTTTGGTATAATATATTTACTTCTCCATA	7.8
11:53420947-53421148	site	dyads_test_vs_ctrl_m1	R	-94	-66	AGTTAGTATATAATACTTTGCTCACCATT	7.5
11:75703357-75703558	site	dyads_test_vs_ctrl_m1	R	-84	-56	TCACATTAATCTTCGTAACCTTTACCAGC	10.0
11:77294068-77294269	site	dyads_test_vs_ctrl_m1	R	58	86	CATCAGACTCCTTTTCTTCTTTTTCTTTA	7.8
11:77709708-77709909	site	dyads_test_vs_ctrl_m1	D	53	81	ATATACAAATATATATATATATATACATA	8.1
11:77709708-77709909	site	dyads_test_vs_ctrl_m1	D	55	83	ATACAAATATATATATATATATACATATA	8.4
11:93945469-93945670	site	dyads_test_vs_ctrl_m1	R	-75	-47	CTACAAAACCTTATGTTATTAACCCCTCT	8.4
12:3109857-3110058	site	dyads_test_vs_ctrl_m1	R	-18	10	CTACAGTGGACATTTCTAAATTTTCCACC	7.6
12:3109857-3110058	site	dyads_test_vs_ctrl_m1	R	20	48	TTTCCATGATTTTCAGTTTTCTTGCCATA	7.9
12:8751261-8751462	site	dyads_test_vs_ctrl_m1	D	5	33	TACAAGCGGCCTTATGTACATTTCCCAAC	8.0
12:10154084-10154285	site	dyads_test_vs_ctrl_m1	R	71	99	GTTCATGTCGCTTTTGTTCTCTTCCCGAA	8.6
12:14929895-14930096	site	dyads_test_vs_ctrl_m1	R	39	67	AATAAATACAACCCGTTACTCTTCCTAGT	8.2
12:17233836-17234037	site	dyads_test_vs_ctrl_m1	R	36	64	ACAGAGAAACATTGGCTACTTTAACCACC	9.5
12:31007094-31007295	site	dyads_test_vs_ctrl_m1	R	4	32	TTTTTTAATTTTAACATACTGTCCCAATA	7.7
12:32850947-32851148	site	dyads_test_vs_ctrl_m1	D	-77	-49	TTTCAGTGATTTACCAGTCTGTTTCCAAC	9.9
12:51409614-51409815	site	dyads_test_vs_ctrl_m1	R	48	76	AAACAAAAAACCAAACTACTGTCCCCATA	11.7
12:53184222-53184423	site	dyads_test_vs_ctrl_m1	D	-40	-12	TATCTGAAACCTTGTAGTCTCTGACCAGC	9.4
12:67037108-67037309	site	dyads_test_vs_ctrl_m1	R	-75	-47	CTACAGTGGATTTGTATACTTTTTTCAAT	8.8
12:99047331-99047532	site	dyads_test_vs_ctrl_m1	R	48	76	TGTGCATACTCTGTAGTATTTTCCACACG	7.5
13:9668663-9668864	site	dyads_test_vs_ctrl_m1	R	-12	16	GTTGAGTACATGAGTTTTCTCTAACCAGT	9.0
13:75771987-75772188	site	dyads_test_vs_ctrl_m1	D	-30	-2	TATAAAAAGAGTAGATATATTTAACCATA	8.0
14:16413597-16413798	site	dyads_test_vs_ctrl_m1	R	-64	-36	CTTCCGTAAACCATAATAACTTAACCGTA	9.2
14:19417204-19417405	site	dyads_test_vs_ctrl_m1	R	-86	-58	CTACAGTGGACATTTCTACATTTTCGACC	7.7
14:19417204-19417405	site	dyads_test_vs_ctrl_m1	R	-48	-20	TTTCCATGATTTTCAGTTTTCTTGCCATA	7.9
14:19417204-19417405	site	dyads_test_vs_ctrl_m1	R	68	96	TTTCTGTGATTTTCATTTTTCTCGCCATA	10.9
14:56956861-56957062	site	dyads_test_vs_ctrl_m1	D	-34	-6	TTTGAATACCCTATTCTACTTTAACACTA	8.8
14:112132278-112132479	site	dyads_test_vs_ctrl_m1	R	62	90	AAACTGCAGCCCAGGCTACTATACCCAGC	9.4
15:8351574-8351775	site	dyads_test_vs_ctrl_m1	R	-60	-32	CTTCTATAACTCAGGATTCAGACTCCATA	7.7
15:36771668-36771869	site	dyads_test_vs_ctrl_m1	D	-62	-34	ATTCATAAAACTTTTATTCCACTTACATG	9.6
15:37967831-37968032	site	dyads_test_vs_ctrl_m1	D	31	59	TTTCAGAACATTTTACATTTTTCCCCCTC	9.6
15:58900176-58900377	site	dyads_test_vs_ctrl_m1	R	68	96	AACGTGAAAACTTTTATTCTATGTACAAT	8.1
15:73343126-73343327	site	dyads_test_vs_ctrl_m1	D	-23	5	AATGAAAGACCTTTAATACTCGTTCCATT	10.4
15:77079096-77079297	site	dyads_test_vs_ctrl_m1	R	-89	-61	ATTCATTATTTTTTGTATTACTCTCCATG	9.6
16:11220452-11220653	site	dyads_test_vs_ctrl_m1	D	-13	15	TTTCATTATTGTAGGCAATTATGTCCACA	8.6
16:22246480-22246681	site	dyads_test_vs_ctrl_m1	R	-45	-17	ATTTAAAAGGTTTTTCTACTGAATCCAGG	8.0
16:33497994-33498195	site	dyads_test_vs_ctrl_m1	R	28	56	CTACAGAATATTTATTTTTTTTACTAAAA	7.6
16:37697133-37697334	site	dyads_test_vs_ctrl_m1	D	-59	-31	ACCCAGAGCCTTTTCTTTTTCTTCCCAAG	8.7
16:38245133-38245334	site	dyads_test_vs_ctrl_m1	D	-83	-55	AAACAAAATTTATTATTATTATATATATA	8.7
16:54120008-54120209	site	dyads_test_vs_ctrl_m1	D	-21	7	AATCAGAACCCTAGTGTTTCTTAACTACG	9.7
16:75561405-75561606	site	dyads_test_vs_ctrl_m1	D	63	91	TTATAGAATTTCTCTTTTCTAGTTCTATA	7.8
16:84647608-84647809	site	dyads_test_vs_ctrl_m1	R	-49	-21	CCCCAGTACGTCTTTGCTCTCTTCCCAAC	9.7
16:91034115-91034316	site	dyads_test_vs_ctrl_m1	D	-41	-13	CCCCAGAAGACCCTTCTAATCTCTCAATA	7.7
16:94242118-94242319	site	dyads_test_vs_ctrl_m1	D	53	81	TTTTAAAACCTTCTGCTACCATATCCACC	8.6
17:3197871-3198072	site	dyads_test_vs_ctrl_m1	D	-31	-3	ATTCAAAACACTTGGGTTCCCCCTCCTCA	7.5
17:23344270-23344471	site	dyads_test_vs_ctrl_m1	D	71	99	TTTCATAAACCAATGGTATCTTATCAAAA	7.9
17:53354579-53354780	site	dyads_test_vs_ctrl_m1	R	-76	-48	CTTCAGATGTTCTTCATACATTTTACAAA	7.6
17:79934084-79934285	site	dyads_test_vs_ctrl_m1	R	-78	-50	AGTCTGTCGTCCTCATTTATGATCCCATA	7.9
17:91220275-91220476	site	dyads_test_vs_ctrl_m1	R	-6	22	CCTCTCTGCTCTATCTATCTATTTCCAGT	8.3
17:91220275-91220476	site	dyads_test_vs_ctrl_m1	R	54	82	CCTCTCTGCTCTATCTATCTATTTCCAGT	8.3
18:15831219-15831420	site	dyads_test_vs_ctrl_m1	D	7	35	TTTCCTTGTTATTACTTTCTCTCCACACA	9.0
18:34909808-34910009	site	dyads_test_vs_ctrl_m1	D	-63	-35	GCACAGCAGTCTCGGCTACTTTCCGAACA	8.2
18:35581883-35582084	site	dyads_test_vs_ctrl_m1	R	58	86	ATTAAGATATAATTCTTTATTTTCCCATA	10.0
18:36667482-36667683	site	dyads_test_vs_ctrl_m1	D	-37	-9	TTTCTGCAATTAATCTTTTTACTCCCACC	8.4
18:36667482-36667683	site	dyads_test_vs_ctrl_m1	D	-34	-6	CTGCAATTAATCTTTTTACTCCCACCATC	7.6
18:43477184-43477385	site	dyads_test_vs_ctrl_m1	D	13	41	ATTCCATAAACGGTATTATTAACACCAAA	8.5
18:61589395-61589596	site	dyads_test_vs_ctrl_m1	D	-4	24	TTTCAGTGCTTTTATTTACTATGCACTTA	9.7
19:4801596-4801797	site	dyads_test_vs_ctrl_m1	R	33	61	TATCAGAGTCGCAGCTTTCGTTCCGCCGC	8.3
19:21281394-21281595	site	dyads_test_vs_ctrl_m1	D	-41	-13	CTTCAGTTCTTAATGTAACTGTACCCTTC	7.6
19:29809764-29809965	site	dyads_test_vs_ctrl_m1	D	-86	-58	TTTCATTAATTTTTCCTTCTGCGATTATA	8.7
2:5961449-5961650	site	dyads_test_vs_ctrl_m1	R	-14	14	TCTCCGCAGCACTTTTTACTTTCCTCGGT	8.0
2:24593420-24593621	site	dyads_test_vs_ctrl_m1	R	-36	-8	GCTTAGAAATGTACTTTTCTGTAGACATG	8.0
2:36389246-36389447	site	dyads_test_vs_ctrl_m1	R	15	43	ACACATCAATCGTATCTTCATCCTCCATT	8.0
2:53145578-53145779	site	dyads_test_vs_ctrl_m1	D	18	46	CTTCAAAAGTAGTGTTTACTTCAACTACA	7.6
2:85041039-85041240	site	dyads_test_vs_ctrl_m1	R	-35	-7	CCTCAAAGCGCTTTTCTACTTCTTCCCTA	9.6
2:98662218-98662419	site	dyads_test_vs_ctrl_m1	D	-3	25	TTTCCATGATTTTCAGTTTTCTTGCCATA	7.9
2:98666864-98667065	site	dyads_test_vs_ctrl_m1	R	-72	-44	TTTCCGTGATTTTCAGGTTTCTCGCCATA	9.4
2:98666864-98667065	site	dyads_test_vs_ctrl_m1	R	8	36	CTACAGTGGACATTTCTAAATTTTCCACC	7.6
2:98666864-98667065	site	dyads_test_vs_ctrl_m1	R	46	74	TTTCTTTGATTTTCAGTTTTCTTGCCATA	7.7
2:103766550-103766751	site	dyads_test_vs_ctrl_m1	D	-47	-19	AATAAAAATAGTTTCCTTCCATATCCAGG	8.5
2:121437724-121437925	site	dyads_test_vs_ctrl_m1	R	-67	-39	ATTCAGAGTATATCCATTCTGTCCTCTCT	8.0
2:131322086-131322287	site	dyads_test_vs_ctrl_m1	D	32	60	AGCCAATAATACAACCTTCTATCCGCATA	10.9
2:153317439-153317640	site	dyads_test_vs_ctrl_m1	R	-44	-16	CGCCAGTAATCATCCTTATCATCCCCGTC	9.4
2:174346330-174346531	site	dyads_test_vs_ctrl_m1	D	56	84	ACACCGCAACCTTTCCTTTTTCCCCCAGT	9.2
3:37714961-37715162	site	dyads_test_vs_ctrl_m1	R	40	68	ACAGAGAAACATTGGCTACTTTAACCACC	9.5
3:95338458-95338659	site	dyads_test_vs_ctrl_m1	D	58	86	TCTCAAAAAGGTAGCGCTCTATCTCCTGC	8.0
3:99500831-99501032	site	dyads_test_vs_ctrl_m1	R	-26	2	ATTCATCACCCCCTTTATCTATCAGCATG	7.7
3:103744046-103744247	site	dyads_test_vs_ctrl_m1	R	25	53	TTCCATTGCTCATCTGTTCTCCCCCCAGG	7.8
3:112478615-112478816	site	dyads_test_vs_ctrl_m1	R	45	73	CTTCAGAGCATCTTCTTTCCTACTTCAGA	7.6
3:116631307-116631508	site	dyads_test_vs_ctrl_m1	R	-49	-21	TCTCTAAAGTGTATATTTTTGTGTCCAGT	9.3
3:135231563-135231764	site	dyads_test_vs_ctrl_m1	R	1	29	TTCTAGTGACTCCGGGTTCTGTTCCCAAC	8.3
3:152232543-152232744	site	dyads_test_vs_ctrl_m1	R	-93	-65	TATCAGTAGTGATAGTTATTTTGTACATT	10.1
4:44123859-44124060	site	dyads_test_vs_ctrl_m1	D	58	86	CTCCAGTAACTTTTGTATATGTACCTAGC	9.4
4:73309982-73310183	site	dyads_test_vs_ctrl_m1	R	13	41	ATTGAGAAGAGTGTTGTTCAGTTTCCACG	7.7
4:74228178-74228379	site	dyads_test_vs_ctrl_m1	D	-57	-29	ACCCATACTTCTGGCCTTCTATCCCCACA	9.1
4:82291556-82291757	site	dyads_test_vs_ctrl_m1	D	11	39	AATCAGTGGTCCATGTTATTCCCCCCAGT	11.7
4:82294688-82294889	site	dyads_test_vs_ctrl_m1	D	72	100	AATCTGTGTACTTACCTATAATAACCAAT	8.9
4:95632907-95633108	site	dyads_test_vs_ctrl_m1	D	-32	-4	TATTATTATTATTATTATTATTTACCATT	8.0
4:95632907-95633108	site	dyads_test_vs_ctrl_m1	D	-26	2	TATTATTATTATTATTTACCATTTCTACT	8.8
4:111807234-111807435	site	dyads_test_vs_ctrl_m1	D	21	49	TTTTAAAACCTTCTGCTACCATATCCACC	8.6
4:119137131-119137332	site	dyads_test_vs_ctrl_m1	R	-56	-28	TATATAAATATCTTCCATCTATACACAGC	7.9
4:123350733-123350934	site	dyads_test_vs_ctrl_m1	D	-68	-40	CTTCATAACACAATTCTTCTTTTACAATT	10.3
4:132148513-132148714	site	dyads_test_vs_ctrl_m1	D	-88	-60	TCTCAACGAAGTCGGCTAATTTTGCCATT	7.9
5:20987139-20987340	site	dyads_test_vs_ctrl_m1	D	-80	-52	TATCATAAAAGTATTACTATATTAACAGG	8.1
5:22486759-22486960	site	dyads_test_vs_ctrl_m1	R	-72	-44	TGCCAGCAGCCCTTGTTTATTTGCCCAGC	8.5
5:22693550-22693751	site	dyads_test_vs_ctrl_m1	D	32	60	GATCAAAATTCTTCTTTACAATTTCTAAT	8.4
5:33076171-33076372	site	dyads_test_vs_ctrl_m1	R	-88	-60	TCACCGTATTGTTTTTTGCTTTATACACA	8.0
5:69461527-69461728	site	dyads_test_vs_ctrl_m1	R	26	54	AAACATCTATCTTCTTGACTTTCCCCATT	7.6
5:89690127-89690328	site	dyads_test_vs_ctrl_m1	D	34	62	ATTCTGTAACCTGATTTAATGTCTTCAAA	7.5
5:92187897-92188098	site	dyads_test_vs_ctrl_m1	R	-62	-34	TATTAGTTGCTTTAGTTTCTCTCTACATA	9.6
5:110118480-110118681	site	dyads_test_vs_ctrl_m1	D	65	93	CCTTATAGTCCATTGCTTCTGCCTCTACG	7.6
6:27230894-27231095	site	dyads_test_vs_ctrl_m1	R	-6	22	CTTCAGAACTTATGTTTATTTTTGCCATA	11.5
6:27230894-27231095	site	dyads_test_vs_ctrl_m1	D	14	42	GTTCTGAAGCTGTTACTTCTCCCTACAGC	8.0
6:27230894-27231095	site	dyads_test_vs_ctrl_m1	D	55	83	AATCCGTAATTTATTGGACCTTGTCCAAC	8.9
6:31475433-31475634	site	dyads_test_vs_ctrl_m1	D	42	70	TTCCAGAGATCCTGAGTTCAATTCCCAGC	9.3
6:44792892-44793093	site	dyads_test_vs_ctrl_m1	R	-21	7	CGTCAGGACCGCTACGGACCTCCACCAGA	8.3
6:49252886-49253087	site	dyads_test_vs_ctrl_m1	D	-92	-64	TTTCATACTTCGTGTATTCTTCCCCAATT	8.4
6:72433132-72433333	site	dyads_test_vs_ctrl_m1	D	-75	-47	GGTGATGGCTTCTCTGTACTTACGCCATA	7.6
6:72434114-72434315	site	dyads_test_vs_ctrl_m1	R	54	82	ATTGAAAGTGTTAGCCTTTTTTCCCCAGA	8.4
6:88578208-88578409	site	dyads_test_vs_ctrl_m1	R	16	44	CTCCATAAAACATTCTTACTATTTCCTTC	9.7
6:94501617-94501818	site	dyads_test_vs_ctrl_m1	D	-49	-21	TTTCATTTACTGTTATTTACTTCTCCAAA	7.7
6:127282170-127282371	site	dyads_test_vs_ctrl_m1	D	-5	23	TGTCTGTGTCTTTCATTTTTCTTGCCATC	7.7
6:145266549-145266750	site	dyads_test_vs_ctrl_m1	D	-67	-39	GTTCTGAACTATAAGCTTATTACTCCAGC	9.3
6:145932827-145933028	site	dyads_test_vs_ctrl_m1	D	23	51	CGTCAGGACCGCTACGGACCTCCACCAGA	8.3
7:7062290-7062491	site	dyads_test_vs_ctrl_m1	D	-76	-48	TCTCTGTATACTATGAATGTCTTCACACA	7.5
7:16562466-16562667	site	dyads_test_vs_ctrl_m1	R	-77	-49	TTTGTGAAGTGCAGGATATTATCCCCATC	8.4
7:29799283-29799484	site	dyads_test_vs_ctrl_m1	D	6	34	ATTCTGTAACCTGATTTAATGTCTTCAAA	7.5
7:84615563-84615764	site	dyads_test_vs_ctrl_m1	D	9	37	AACCAAAAATCTATTCTTCTGATGACATG	7.7
7:90208138-90208339	site	dyads_test_vs_ctrl_m1	D	-45	-17	TCACAGTATGTTTGATTTTTATCCACAAG	8.9
7:123194182-123194383	site	dyads_test_vs_ctrl_m1	D	-95	-67	GATCAGTAACTATGCATACTGTAACCAAG	11.8
8:3583767-3583968	site	dyads_test_vs_ctrl_m1	D	-28	0	ACAGAGAAACATTGGCTACTTTAACCACC	9.5
8:4040161-4040362	site	dyads_test_vs_ctrl_m1	D	45	73	TGTCAAAAACAGTTGGTACATATTCCAAT	7.7
8:20986996-20987197	site	dyads_test_vs_ctrl_m1	R	-10	18	CTACACAACTCCTTCTTACTTTCCCCATG	11.9
8:25640813-25641014	site	dyads_test_vs_ctrl_m1	D	18	46	AAACTTTAGCCCTACTGACTATTACCATT	7.7
8:34111497-34111698	site	dyads_test_vs_ctrl_m1	D	-18	10	CTTCAGATGTTCTTCATACATTTTACAAA	7.6
8:41658337-41658538	site	dyads_test_vs_ctrl_m1	D	-2	26	CTTCATAGACTCATTGTACTCTATCTTTT	8.2
8:78486064-78486265	site	dyads_test_vs_ctrl_m1	R	35	63	GTTCCGAACTATAAGCTTATTACTCCAGC	10.2
8:112013923-112014124	site	dyads_test_vs_ctrl_m1	D	-73	-45	TTTTAAAACCTTCTGCTACCATATCCACC	8.6
9:3000460-3000661	site	dyads_test_vs_ctrl_m1	D	-68	-40	TTTCCATGATTTTCAGTTTTCTTGCCATA	7.9
9:3000460-3000661	site	dyads_test_vs_ctrl_m1	D	-30	-2	CTACAGTGGACATTTCTAAATTTTCCACC	7.6
9:3000460-3000661	site	dyads_test_vs_ctrl_m1	D	50	78	TTTCCGTGATTTTCAGTTTTCTCGACATA	10.0
9:3006722-3006923	site	dyads_test_vs_ctrl_m1	D	-15	13	TTTCCGTGATTTTCAGTTTTCTCGCCATA	11.7
9:3008437-3008638	site	dyads_test_vs_ctrl_m1	D	-30	-2	TTTCCGTGATTTTCAGTTTTCTTGCCATA	9.9
9:3009928-3010129	site	dyads_test_vs_ctrl_m1	D	21	49	TTTCCGTGATTTTCAGTTTTCTCGCCATA	11.7
9:3014038-3014239	site	dyads_test_vs_ctrl_m1	D	-53	-25	TTTCCATGATTTTCAGTTTTCTTGCCATA	7.9
9:3014038-3014239	site	dyads_test_vs_ctrl_m1	D	-15	13	CTACAGTGGACATTTCTAAATTTTCCACC	7.6
9:3014038-3014239	site	dyads_test_vs_ctrl_m1	D	65	93	TTTCAGTGATTTTCAGTTTTCTCGCCATA	12.7
9:3015300-3015501	site	dyads_test_vs_ctrl_m1	D	-85	-57	TTTCCTTGATTTTCAGTTTTCTTGCCATA	7.6
9:3015300-3015501	site	dyads_test_vs_ctrl_m1	D	31	59	TTTCCATGATTTTCAGTTTTCTCGCCATA	9.7
9:3017931-3018132	site	dyads_test_vs_ctrl_m1	D	-85	-57	TTTCCGTGATTTTCAGTTTTCTTGCCATA	9.9
9:3017931-3018132	site	dyads_test_vs_ctrl_m1	D	31	59	TTTCCATGATTTTCAGTTTTCTCGCCATA	9.7
9:3020812-3021013	site	dyads_test_vs_ctrl_m1	D	-46	-18	TTTCCATGATTTTCAGTTTTCTTGCCATA	7.9
9:3020812-3021013	site	dyads_test_vs_ctrl_m1	D	-8	20	CTACAGTGGACATTTCTAAATTTTCCACC	7.6
9:3020812-3021013	site	dyads_test_vs_ctrl_m1	D	72	100	TTTCAGTGATTTTCAGTTTTCTCGCCATA	12.7
9:3022432-3022633	site	dyads_test_vs_ctrl_m1	D	-87	-59	TTTCAATGATTTTCATTTTTCTTGCCATA	10.0
9:3022432-3022633	site	dyads_test_vs_ctrl_m1	D	31	59	TTTCCGTGATTTTCAGTTTTCTTGCCATA	9.9
9:3024368-3024569	site	dyads_test_vs_ctrl_m1	D	-92	-64	TTTCCGTGATTTTCAGTTTCCTCGCCATA	9.9
9:3024368-3024569	site	dyads_test_vs_ctrl_m1	D	24	52	TTTCCATGATTTTCAGTTTTCTTGCCATA	7.9
9:3024368-3024569	site	dyads_test_vs_ctrl_m1	D	62	90	CTACAGTGGACATTTCTAAATTTTCCACC	7.6
9:3026320-3026521	site	dyads_test_vs_ctrl_m1	D	-58	-30	TTTCCTTGATTTTCAGTTTTCTTGCCATA	7.6
9:3026320-3026521	site	dyads_test_vs_ctrl_m1	D	-20	8	CTACAGTGGACATTTCTAAATTTTCCACC	7.6
9:3026320-3026521	site	dyads_test_vs_ctrl_m1	D	60	88	TTTCAGTGATTTTCAGTTTCCTTGCCATA	9.1
9:3028738-3028939	site	dyads_test_vs_ctrl_m1	D	-17	11	TTTCCGTGATTTTCAGTTTTCTTGCCATA	9.9
9:3035002-3035203	site	dyads_test_vs_ctrl_m1	D	-25	3	TTTCCATGATTTTCAGTTTTCTTGCCATA	7.9
9:3035002-3035203	site	dyads_test_vs_ctrl_m1	D	13	41	CTACAGTGGACATTTCTAAATTTTCCACC	7.6
9:3037313-3037514	site	dyads_test_vs_ctrl_m1	D	-58	-30	TTTCCATGATTTTCAGTTTTCTTGCCATA	7.9
9:3037313-3037514	site	dyads_test_vs_ctrl_m1	D	-20	8	CTACAGTGGACATTTCTAAATTTTCCACC	7.6
9:35305341-35305542	site	dyads_test_vs_ctrl_m1	R	-87	-59	TTTCCATGATTTTCAGTTTTCTTGCCATA	7.9
9:35305341-35305542	site	dyads_test_vs_ctrl_m1	R	29	57	TTTCCGTGATTTTCAGTTTTCTCCCCATA	11.8
9:70573689-70573890	site	dyads_test_vs_ctrl_m1	R	-56	-28	TCTCATAATCCTTGGCTTCCTTCTCCGGG	9.8
9:85325034-85325235	site	dyads_test_vs_ctrl_m1	D	53	81	GGTCAGAATCATTGCACACTTTAACCATT	8.7
9:88449808-88450009	site	dyads_test_vs_ctrl_m1	R	-82	-54	GTTCAAAAACTATCTGTACTATCTGTACT	9.2
MT:5585-5786	site	dyads_test_vs_ctrl_m1	D	63	91	CATCAGTAGACCTAACAATTTTCTCCCTT	8.1
X:5265901-5266102	site	dyads_test_vs_ctrl_m1	R	-10	18	ATTGAGTAGACAGTTGTTCAATTTCCATG	7.6
X:23800666-23800867	site	dyads_test_vs_ctrl_m1	R	54	82	ATACTATATGGTACCTTATTTTCTCCAGG	8.8
X:33363028-33363229	site	dyads_test_vs_ctrl_m1	D	46	74	ACTCAAAATCATTGCCATCTACTCCTATA	8.4
X:33581522-33581723	site	dyads_test_vs_ctrl_m1	R	47	75	TTACAGAATTGGAAAATATTTTCACCAAC	7.7
X:48010296-48010497	site	dyads_test_vs_ctrl_m1	R	16	44	TCTTCGTAGTTTACCTGACCATCCCCATC	7.7
X:61785809-61786010	site	dyads_test_vs_ctrl_m1	R	-52	-24	ACTCAGTAGTCCATATTGCTATCTCATCA	9.4
X:105278704-105278905	site	dyads_test_vs_ctrl_m1	D	-99	-71	TGTGCATACTCTGTAGTATTTTCCACACG	7.5
X:114981201-114981402	site	dyads_test_vs_ctrl_m1	R	70	98	AAACTAAAATCTACCTTTCTCGCTCCCCG	7.9
;
; Matrices
;	matrix	name                 	ncol	nrow	pseudo	Wmin	Wmax	Wrange
;	1	dyads_test_vs_ctrl_m1	29	4	0	-29.100	18.900	48.000	a:0.270 c:0.231 g:0.232 t:0.267 
; Number of sequences scanned	2996
; Sum of sequence lengths	602196
; N residues           	0
; Matches per matrix
;	matrix	name                 	matches	scored
;	1	dyads_test_vs_ctrl_m1	184	0
;		TOTAL          	184	0
; Host name	rsat
; Job started	2025-09-18.095853
; Job done	2025-09-18.095853
; Seconds	0.25
;	user	0.25
;	system	0.03
;	cuser	0.08
;	csystem	0.01
