; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/10/28/oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/10/28/oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/10/28/oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/10/28/oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/10/28/oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	3	2	0	5	0	5	0	5	0	5	1	3
c	0	1	0	0	0	0	0	0	0	0	0	1
g	0	0	0	0	4	0	5	0	4	0	3	1
t	2	2	5	0	1	0	0	0	1	0	1	0
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/28//oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/28//oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices_logo_m1_rc.png
;
a	1	1	1	0	9	8	0	1	9	2	4
c	1	2	7	8	0	1	0	8	0	2	1
g	2	5	0	1	0	0	0	0	0	2	0
t	5	1	1	0	0	0	9	0	0	3	4
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/28//oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/28//oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices_logo_m2_rc.png
;
a	1	0	0	0	0	0	0	0	0	2	1	0
c	0	0	0	0	2	0	2	2	0	0	0	1
g	1	1	2	0	0	2	0	0	0	0	0	0
t	0	1	0	2	0	0	0	0	2	0	1	1
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/28//oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/28//oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices_logo_m3_rc.png
;
a	3	0	1	0	0	10	1	0	10	4	6
c	4	0	0	0	9	0	1	9	0	2	1
g	0	1	8	9	0	0	0	1	0	2	1
t	3	9	1	1	1	0	8	0	0	2	2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/28//oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/28//oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices_logo_m4_rc.png
;
a	1	6	11	1	0	0	0	0	1	1	2	6
c	4	2	0	0	0	0	10	0	2	0	4	0
g	2	1	0	0	0	0	0	0	1	9	1	3
t	4	2	0	10	11	11	1	11	7	1	4	2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/28//oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/28//oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices_logo_m5_rc.png
;
a	0	4	7	0	6	7	7	0	0	0	3	2
c	5	1	0	0	1	0	0	0	0	1	0	3
g	1	1	0	7	0	0	0	0	1	5	2	0
t	1	1	0	0	0	0	0	7	6	1	2	2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/28//oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/28//oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices_logo_m6_rc.png
;
a	1	2	0	4	4	1	0	0	0	4	1	1
c	2	0	0	0	0	0	0	0	0	0	2	2
g	0	1	4	0	0	3	0	0	0	0	0	1
t	1	1	0	0	0	0	4	4	4	0	1	0
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/28//oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/28//oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices_logo_m7_rc.png
;
a	4	2	0	0	9	9	9	9	5	3
c	2	3	0	0	0	0	0	0	1	2
g	1	0	0	9	0	0	0	0	1	2
t	2	4	9	0	0	0	0	0	2	2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/28//oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/28//oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices_logo_m8_rc.png
;
a	4	3	9	9	9	9	9	0	4	4
c	1	0	0	0	0	0	0	0	2	0
g	2	1	0	0	0	0	0	9	1	1
t	2	5	0	0	0	0	0	0	2	4
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/28//oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/28//oligo-analysis_2025-10-28.065242_V4TnLm_pssm_count_matrices_logo_m9_rc.png
;
; Host name	rsat
; Job started	2025-10-28.065245
; Job done	2025-10-28.065247
; Seconds	0.16
;	user	0.16
;	system	0.06
;	cuser	2.05
;	csystem	0.37