; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/10/30/oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/10/30/oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/10/30/oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_links.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/10/30/oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices.tf
; Input format tf
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/10/30/oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_links.txt
; Output format tab
; pseudo-weight 1
a 19 25 54 53 60 6 7 9 4 0 6 8 15 25
c 14 15 2 4 5 56 4 46 0 1 3 2 11 8
g 8 11 2 3 1 0 46 4 56 5 4 2 15 14
t 25 15 8 6 0 4 9 7 6 60 53 54 25 19
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/30//oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/30//oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo_m1_rc.png
;
a 49 55 91 98 133 139 13 6 12 140 140 38 63 46 57
c 22 33 20 16 4 7 8 2 118 3 1 15 10 23 23
g 23 20 15 11 5 1 117 3 5 1 1 14 21 25 19
t 56 42 24 25 8 3 12 139 15 6 8 83 56 56 51
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/30//oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/30//oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo_m2_rc.png
;
a 6 6 1 0 21 0 0 0 1 4 9 3
c 4 6 17 20 0 20 0 0 0 17 5 2
g 4 1 0 1 0 0 0 0 17 0 2 1
t 7 8 3 0 0 1 21 21 3 0 5 15
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/30//oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/30//oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo_m3_rc.png
;
a 83 73 96 128 183 194 25 8 17 190 194 121 86 74
c 28 45 30 20 8 6 9 4 164 4 2 23 22 29
g 25 28 31 25 5 1 157 5 9 3 2 21 31 35
t 70 60 49 33 10 5 15 189 16 9 8 41 67 68
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/30//oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/30//oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo_m4_rc.png
;
a 20 18 14 42 0 2 2 0 0 2 5 15 11
c 6 4 15 1 44 1 37 0 2 0 5 4 8
g 8 6 6 2 1 37 1 45 4 2 4 9 8
t 11 17 10 0 0 5 5 0 39 41 31 17 18
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/30//oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/30//oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo_m5_rc.png
;
a 13 11 16 32 32 1 2 0 1 0 4 10 12
c 4 8 6 3 2 32 0 34 0 16 14 3 3
g 6 4 5 0 0 2 33 0 33 4 8 7 5
t 12 12 8 0 1 0 0 1 1 15 9 15 15
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/30//oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/30//oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo_m6_rc.png
;
a 14 20 33 38 20 1 5 2 1 0 2 13 13 20
c 14 8 6 5 25 51 3 42 1 1 4 9 9 8
g 10 7 4 4 6 0 43 2 48 2 2 7 11 12
t 14 17 9 5 1 0 1 6 2 49 44 23 19 12
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/30//oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/30//oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo_m7_rc.png
;
a 81 76 0 0 216 216 216 216 86 69
c 21 19 0 0 0 0 0 0 26 41
g 18 34 0 0 0 0 0 0 25 33
t 96 87 216 216 0 0 0 0 79 73
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/30//oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/30//oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo_m8_rc.png
;
a 131 141 328 340 337 324 57 51 323 166 156
c 78 68 9 9 5 10 262 274 12 45 51
g 40 48 8 2 10 6 7 10 14 43 49
t 109 101 13 7 6 18 32 23 9 104 102
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/30//oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/30//oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo_m9_rc.png
;
a 200 202 475 495 488 483 92 57 444 226 244
c 75 100 15 6 7 4 23 7 26 51 51
g 81 79 13 8 6 4 322 8 13 80 62
t 164 139 17 11 19 29 83 448 37 163 163
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/30//oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/30//oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo_m10_rc.png
;
a 29 39 0 86 86 86 0 86 26 40
c 11 11 0 0 0 0 0 0 16 12
g 15 7 0 0 0 0 86 0 20 9
t 31 29 86 0 0 0 0 0 24 25
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/30//oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/10/30//oligo-analysis_2025-10-30.101844_QPKtGB_pssm_count_matrices_logo_m11_rc.png
;
; Host name rsat
; Job started 2025-10-30.101852
; Job done 2025-10-30.101855
; Seconds 0.21
; user 0.21
; system 0.07
; cuser 2.68
; csystem 0.42