/var/www/html/rsat/public_html/tmp/www-data/2025/10/30/peak-motifs.2025-10-30.045413_2025-10-30.045413_ZEQzsU/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab 
 position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2025/10/30/peak-motifs.2025-10-30.045413_2025-10-30.045413_ZEQzsU/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 2 -ci 20 -img_format png -title F1 -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2025/10/30/peak-motifs.2025-10-30.045413_2025-10-30.045413_ZEQzsU/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Citation: van Helden, et al. (2000).  Nucleic Acids Res 28, 1000-1010.
 Sequence file                	$RSAT/public_html/tmp/www-data/2025/10/30/peak-motifs.2025-10-30.045413_2025-10-30.045413_ZEQzsU/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta
 Sequence format              	fasta
 Sequence type                	dna
 Output file                  	$RSAT/public_html/tmp/www-data/2025/10/30/peak-motifs.2025-10-30.045413_2025-10-30.045413_ZEQzsU/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Oligo length                 	2
 Occurrences counted  on a single  strands
 Conditions of applicability checked.
 Background model estimation: homogeneous repartition
 Sequence statistics:
	Nb of sequences              	21
	Sum of sequence lengths      	13008
	Min sequence length          	0
	Max sequence length          	1000
	Average sequence length      	619
	Possible positions           	12987
 Sequences:
	#	length	ID
	1	1000	ENST00000220584.9
	2	1000	FDFT1-201
	3	191	FDFT1-201
	4	98	FDFT1-201
	5	184	FDFT1-201
	6	129	FDFT1-201
	7	192	FDFT1-201
	8	177	FDFT1-201
	9	153	FDFT1-201
	10	911	FDFT1-201
	11	1000	FDFT1-201
	12	775	FDFT1-201
	13	1000	FDFT1-201
	14	1000	FDFT1-201
	15	1000	FDFT1-201
	16	1000	FDFT1-201
	17	1000	FDFT1-201
	18	417	FDFT1-201
	19	689	FDFT1-201
	20	92	FDFT1-201
	21	1000	8
 Oligonucleotide statistics:
	Total occurrences    	9811
 Position interval parameters:
	Position interval    	20
	Number of windows    	50
	Total positions      	12987
	Degrees of freedom   	49
 K-mer clustering parameters:
	Number of clusters   	0
	Clustering method    	complete
 Position intervals:
	window	[min,max]	mid	seq	occ
	1	-25	[-499,-480]	-489.5	9	180
	2	-24	[-479,-460]	-469.5	9	180
	3	-23	[-459,-440]	-449.5	10	196
	4	-22	[-439,-420]	-429.5	10	200
	5	-21	[-419,-400]	-409.5	10	200
	6	-20	[-399,-380]	-389.5	11	208
	7	-19	[-379,-360]	-369.5	11	220
	8	-18	[-359,-340]	-349.5	12	225
	9	-17	[-339,-320]	-329.5	12	240
	10	-16	[-319,-300]	-309.5	12	240
	11	-15	[-299,-280]	-289.5	12	240
	12	-14	[-279,-260]	-269.5	12	240
	13	-13	[-259,-240]	-249.5	12	240
	14	-12	[-239,-220]	-229.5	12	240
	15	-11	[-219,-200]	-209.5	13	249
	16	-10	[-199,-180]	-189.5	13	260
	17	-9	[-179,-160]	-169.5	13	260
	18	-8	[-159,-140]	-149.5	13	260
	19	-7	[-139,-120]	-129.5	13	260
	20	-6	[-119,-100]	-109.5	13	260
	21	-5	[-99,-80]	-89.5	17	313
	22	-4	[-79,-60]	-69.5	19	362
	23	-3	[-59,-40]	-49.5	21	396
	24	-2	[-39,-20]	-29.5	21	420
	25	-1	[-19,0]	-9.5	21	420
	26	0	[1,20]	10.5	21	420
	27	1	[21,40]	30.5	21	420
	28	2	[41,60]	50.5	21	392
	29	3	[61,80]	70.5	19	358
	30	4	[81,100]	90.5	17	307
	31	5	[101,120]	110.5	13	260
	32	6	[121,140]	130.5	13	260
	33	7	[141,160]	150.5	13	260
	34	8	[161,180]	170.5	13	260
	35	9	[181,200]	190.5	13	260
	36	10	[201,220]	210.5	13	247
	37	11	[221,240]	230.5	12	240
	38	12	[241,260]	250.5	12	240
	39	13	[261,280]	270.5	12	240
	40	14	[281,300]	290.5	12	240
	41	15	[301,320]	310.5	12	240
	42	16	[321,340]	330.5	12	240
	43	17	[341,360]	350.5	12	223
	44	18	[361,380]	370.5	11	220
	45	19	[381,400]	390.5	11	206
	46	20	[401,420]	410.5	10	200
	47	21	[421,440]	430.5	10	200
	48	22	[441,460]	450.5	10	194
	49	23	[461,480]	470.5	9	180
	50	24	[481,500]	490.5	9	171

 Column headers
	1	seq            	pattern sequence
	2	id             	pattern identifier
	3	occ            	pattern occurrences
	4	chi2           	observed chi-square
	5	df             	degrees of freedom
	6	Pval           	P-value (probability for one word to be a false positive)
	7	Eval           	E-value; expected number of false positives (Eval = Pval * nb_tests)
	8	sig            	Significance (sig = -log10(Eval))
	9	rank           	rank of the pattern according to sorting criterion
	10	-489.5         	occurrences in window	1	[-499,-480]
	11	-469.5         	occurrences in window	2	[-479,-460]
	12	-449.5         	occurrences in window	3	[-459,-440]
	13	-429.5         	occurrences in window	4	[-439,-420]
	14	-409.5         	occurrences in window	5	[-419,-400]
	15	-389.5         	occurrences in window	6	[-399,-380]
	16	-369.5         	occurrences in window	7	[-379,-360]
	17	-349.5         	occurrences in window	8	[-359,-340]
	18	-329.5         	occurrences in window	9	[-339,-320]
	19	-309.5         	occurrences in window	10	[-319,-300]
	20	-289.5         	occurrences in window	11	[-299,-280]
	21	-269.5         	occurrences in window	12	[-279,-260]
	22	-249.5         	occurrences in window	13	[-259,-240]
	23	-229.5         	occurrences in window	14	[-239,-220]
	24	-209.5         	occurrences in window	15	[-219,-200]
	25	-189.5         	occurrences in window	16	[-199,-180]
	26	-169.5         	occurrences in window	17	[-179,-160]
	27	-149.5         	occurrences in window	18	[-159,-140]
	28	-129.5         	occurrences in window	19	[-139,-120]
	29	-109.5         	occurrences in window	20	[-119,-100]
	30	-89.5          	occurrences in window	21	[-99,-80]
	31	-69.5          	occurrences in window	22	[-79,-60]
	32	-49.5          	occurrences in window	23	[-59,-40]
	33	-29.5          	occurrences in window	24	[-39,-20]
	34	-9.5           	occurrences in window	25	[-19,0]
	35	10.5           	occurrences in window	26	[1,20]
	36	30.5           	occurrences in window	27	[21,40]
	37	50.5           	occurrences in window	28	[41,60]
	38	70.5           	occurrences in window	29	[61,80]
	39	90.5           	occurrences in window	30	[81,100]
	40	110.5          	occurrences in window	31	[101,120]
	41	130.5          	occurrences in window	32	[121,140]
	42	150.5          	occurrences in window	33	[141,160]
	43	170.5          	occurrences in window	34	[161,180]
	44	190.5          	occurrences in window	35	[181,200]
	45	210.5          	occurrences in window	36	[201,220]
	46	230.5          	occurrences in window	37	[221,240]
	47	250.5          	occurrences in window	38	[241,260]
	48	270.5          	occurrences in window	39	[261,280]
	49	290.5          	occurrences in window	40	[281,300]
	50	310.5          	occurrences in window	41	[301,320]
	51	330.5          	occurrences in window	42	[321,340]
	52	350.5          	occurrences in window	43	[341,360]
	53	370.5          	occurrences in window	44	[361,380]
	54	390.5          	occurrences in window	45	[381,400]
	55	410.5          	occurrences in window	46	[401,420]
	56	430.5          	occurrences in window	47	[421,440]
	57	450.5          	occurrences in window	48	[441,460]
	58	470.5          	occurrences in window	49	[461,480]
	59	490.5          	occurrences in window	50	[481,500]
seq id occ chi2 df Pval Eval sig rank -489.5 -469.5 -449.5 -429.5 -409.5 -389.5 -369.5 -349.5 -329.5 -309.5 -289.5 -269.5 -249.5 -229.5 -209.5 -189.5 -169.5 -149.5 -129.5 -109.5 -89.5 -69.5 -49.5 -29.5 -9.5 10.5 30.5 50.5 70.5 90.5 110.5 130.5 150.5 170.5 190.5 210.5 230.5 250.5 270.5 290.5 310.5 330.5 350.5 370.5 390.5 410.5 430.5 450.5 470.5 490.5
tt tt 1040 135.5 49 4.9e-10 7.8e-09 8.11 1 19 14 11 12 17 21 26 15 23 14 20 12 18 20 25 26 13 16 9 12 19 25 22 27 18 20 17 21 20 28 26 28 14 26 33 31 23 29 24 15 21 27 28 28 22 31 23 11 23 17
aa aa 746 125.0 49 1.4e-08 2.3e-07 6.64 2 13 9 18 13 7 9 8 23 24 17 13 10 9 18 22 10 10 13 10 18 18 10 15 14 12 10 16 6 18 31 15 22 16 18 19 16 15 16 12 17 13 19 7 17 15 19 14 18 19 15
ta ta 552 82.6 49 1.9e-03 0.03 1.52 3 11 8 8 9 8 10 9 5 11 15 7 11 10 9 13 11 5 8 9 11 10 19 13 8 9 6 15 8 15 13 10 16 10 10 14 16 19 15 17 8 16 11 5 8 11 12 18 8 12 12
ac ac 461 80.2 49 3.3e-03 0.052 1.28 4 8 9 6 11 5 7 10 10 21 17 13 6 18 7 7 7 10 7 11 9 14 10 12 12 12 7 8 12 14 11 2 9 4 13 11 7 7 7 5 9 11 8 5 9 6 9 6 12 3 7
ag ag 705 78.4 49 4.8e-03 0.077 1.12 5 14 11 17 13 11 12 20 16 11 14 15 17 18 19 15 9 13 9 16 16 8 13 20 13 16 14 21 13 14 13 12 7 16 10 15 13 14 15 14 18 13 15 16 19 15 8 13 6 20 15
tc tc 573 78.0 49 5.3e-03 0.084 1.08 6 7 9 8 14 15 11 16 15 9 7 16 16 8 10 10 14 9 7 11 13 14 12 12 9 10 15 9 12 10 12 19 12 13 19 14 12 13 6 13 13 9 17 13 7 9 18 7 7 7 5
tg tg 808 74.8 49 1.0e-02 0.17 0.78 7 14 20 14 10 17 18 11 14 14 15 14 17 11 17 17 11 21 21 17 13 11 17 17 28 21 28 18 26 19 13 19 16 23 9 10 12 14 19 20 12 15 7 26 16 20 9 14 20 8 15
gg gg 557 73.1 49 1.5e-02 0.23 0.63 8 7 16 12 12 8 14 11 11 8 9 12 11 15 17 7 11 18 14 8 5 10 9 19 17 13 14 17 9 10 8 11 8 10 7 9 18 5 12 12 18 11 12 6 14 7 9 9 12 11 4
ca ca 649 68.7 49 3.3e-02 0.53 0.27 9 17 17 12 15 13 11 15 12 17 14 19 17 17 9 11 13 10 14 16 14 18 10 16 15 16 14 10 14 20 16 10 11 13 16 11 7 7 9 5 15 16 14 13 13 12 10 7 14 8 6
cc cc 567 67.7 49 4.0e-02 0.64 0.20 10 10 6 14 9 18 8 9 18 7 14 10 15 14 12 10 12 12 11 12 13 18 10 12 16 14 12 13 14 13 8 14 11 11 16 7 8 14 7 11 13 19 15 9 6 8 6 6 13 2 7
gc gc 499 67.3 49 4.2e-02 0.67 0.17 11 16 14 11 9 13 12 10 6 7 14 10 11 9 12 8 10 12 14 12 7 10 11 12 18 15 16 9 15 14 7 9 6 10 6 4 5 5 12 8 11 10 6 10 12 8 2 8 13 6 4
at at 617 65.1 49 6.2e-02 0.99 0.01 12 13 13 12 12 13 12 10 9 9 7 7 14 8 6 16 13 6 14 8 12 11 15 12 10 15 15 11 14 16 22 15 16 15 12 14 17 19 13 12 11 14 14 10 10 16 12 16 6 10 10
ga ga 584 63.4 49 8.1e-02 1.3 -0.11 13 9 7 15 11 9 12 15 18 12 9 9 11 18 12 11 9 12 8 12 9 9 6 13 16 15 14 17 17 11 12 9 7 12 10 12 16 13 10 13 12 6 11 16 15 14 8 10 5 14 13
gt gt 570 58.5 49 1.7e-01 2.7 -0.43 14 8 12 10 10 8 10 10 8 11 9 14 13 10 12 13 7 10 10 11 14 5 13 14 12 13 15 20 14 8 10 14 13 18 7 11 5 14 13 14 11 11 8 20 12 10 8 15 11 8 13
ct ct 745 44.0 49 6.8e-01 11 -1.03 15 10 12 6 14 17 18 16 15 15 21 17 17 11 19 12 14 18 13 17 12 19 20 17 20 16 16 14 19 17 11 17 15 13 17 16 15 14 16 19 14 14 13 14 11 13 17 11 15 9 9
cg cg 138 0.0 49 1.0e+00 16 -1.20 16 4 3 6 6 1 3 4 5 1 4 4 2 6 1 0 4 2 2 1 2 2 3 4 3 5 5 5 6 2 2 0 3 2 4 2 3 4 1 1 3 1 3 2 3 0 2 3 3 0 0 
 Host name	rsat
 Job started	2025-10-30.045416
 Job done	2025-10-30.045416
 Seconds	0.19
	user	0.19
	system	0
	cuser	0
;	csystem	0