; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/11/07/dyad-analysis_2025-11-07.154324_PnCwPL_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/11/07/dyad-analysis_2025-11-07.154324_PnCwPL_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/11/07/dyad-analysis_2025-11-07.154324_PnCwPL_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/11/07/dyad-analysis_2025-11-07.154324_PnCwPL_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/11/07/dyad-analysis_2025-11-07.154324_PnCwPL_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	2	3	4	0	0	0	12	4	4	12	2	10	1	0	3	3	3	0	0	0	12	7	4
c	6	7	2	20	0	2	1	5	7	1	10	0	7	7	6	8	4	18	20	0	2	3	8
g	8	3	2	0	20	18	4	8	6	7	7	0	10	1	7	5	1	2	0	20	2	7	6
t	4	7	12	0	0	0	3	3	3	0	1	10	2	12	4	4	12	0	0	0	4	3	2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//dyad-analysis_2025-11-07.154324_PnCwPL_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//dyad-analysis_2025-11-07.154324_PnCwPL_pssm_count_matrices_logo_m1_rc.png
;
a	2	7	6	0	0	1	12	4	5	14	5	12	2	3	5	3	3	1	1	0	9	9
c	5	9	8	26	0	0	5	6	6	2	9	1	10	7	10	11	6	25	25	0	5	4
g	12	4	3	0	26	24	4	12	10	6	9	0	9	3	7	7	5	0	0	26	4	7
t	7	6	9	0	0	1	5	4	5	4	3	13	5	13	4	5	12	0	0	0	8	6
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//dyad-analysis_2025-11-07.154324_PnCwPL_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//dyad-analysis_2025-11-07.154324_PnCwPL_pssm_count_matrices_logo_m2_rc.png
;
a	0	0	0	0	0	3	0	0	0	0	1
c	3	0	6	6	0	0	0	6	0	3	2
g	3	2	0	0	6	1	6	0	6	2	1
t	0	4	0	0	0	2	0	0	0	1	2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//dyad-analysis_2025-11-07.154324_PnCwPL_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//dyad-analysis_2025-11-07.154324_PnCwPL_pssm_count_matrices_logo_m3_rc.png
;
a	1	1	8	0	8	2	2	2	0	2	0	0	0	1	2
c	1	3	0	0	0	1	0	4	3	0	8	8	0	3	2
g	5	3	0	8	0	3	2	1	2	3	0	0	8	2	2
t	1	1	0	0	0	2	4	1	3	3	0	0	0	2	2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//dyad-analysis_2025-11-07.154324_PnCwPL_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//dyad-analysis_2025-11-07.154324_PnCwPL_pssm_count_matrices_logo_m4_rc.png
;
a	0	3	0	0	0	3	0	2	3	3	4	1	2	0	0	0	0	1	0
c	1	0	6	0	0	1	2	0	1	0	0	1	0	3	6	0	6	4	2
g	1	2	0	6	6	2	2	2	0	3	0	3	2	3	0	6	0	1	4
t	4	1	0	0	0	0	2	2	2	0	2	1	2	0	0	0	0	0	0
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//dyad-analysis_2025-11-07.154324_PnCwPL_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//dyad-analysis_2025-11-07.154324_PnCwPL_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2025-11-07.154330
; Job done	2025-11-07.154331
; Seconds	0.15
;	user	0.15
;	system	0.06
;	cuser	1.24
;	csystem	0.18