; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/11/07/dyad-analysis_2025-11-07.202048_KjDwOi_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/11/07/dyad-analysis_2025-11-07.202048_KjDwOi_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/11/07/dyad-analysis_2025-11-07.202048_KjDwOi_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/11/07/dyad-analysis_2025-11-07.202048_KjDwOi_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/11/07/dyad-analysis_2025-11-07.202048_KjDwOi_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	2	1	4	0	0	1	1	1	1	0	0	0	0	0	1	1
c	0	0	0	0	0	1	1	0	0	1	1	0	4	0	1	1
g	1	2	0	0	4	1	0	1	0	0	2	0	0	4	2	0
t	1	1	0	4	0	1	2	2	3	3	1	4	0	0	0	2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//dyad-analysis_2025-11-07.202048_KjDwOi_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//dyad-analysis_2025-11-07.202048_KjDwOi_pssm_count_matrices_logo_m1_rc.png
;
a	2	0	0	0	0	2	0	0	1	1	0	1	3	1	0	2	2	2	1	2	0	2	4	0	4	1	2
c	1	2	0	0	4	1	2	1	0	0	3	0	1	0	1	1	0	1	2	0	2	1	0	4	0	0	2
g	0	1	4	0	0	1	1	1	2	2	1	3	0	1	2	1	0	1	0	0	2	1	0	0	0	1	0
t	1	1	0	4	0	0	1	2	1	1	0	0	0	2	1	0	2	0	1	2	0	0	0	0	0	2	0
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//dyad-analysis_2025-11-07.202048_KjDwOi_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//dyad-analysis_2025-11-07.202048_KjDwOi_pssm_count_matrices_logo_m2_rc.png
;
; Host name	rsat
; Job started	2025-11-07.202052
; Job done	2025-11-07.202052
; Seconds	0.14
;	user	0.14
;	system	0.02
;	cuser	0.43
;	csystem	0.08