; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/11/07/oligo-analysis_2025-11-07.201840_n7VJ3Y_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/11/07/oligo-analysis_2025-11-07.201840_n7VJ3Y_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/11/07/oligo-analysis_2025-11-07.201840_n7VJ3Y_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/11/07/oligo-analysis_2025-11-07.201840_n7VJ3Y_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/11/07/oligo-analysis_2025-11-07.201840_n7VJ3Y_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	10	6	10	2	0	0	1	30	0	0	9	6	9
c	7	9	6	7	32	1	0	2	0	34	0	10	7
g	9	5	7	6	0	0	0	1	0	0	5	6	7
t	8	14	11	19	2	33	33	1	34	0	20	12	11
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//oligo-analysis_2025-11-07.201840_n7VJ3Y_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//oligo-analysis_2025-11-07.201840_n7VJ3Y_pssm_count_matrices_logo_m1_rc.png
;
a	10	6	10	2	0	0	0	32	0	1	16	7	11
c	7	9	6	7	31	1	1	0	0	32	0	10	4
g	7	3	5	6	2	0	1	1	0	0	5	7	6
t	9	15	12	18	0	32	31	0	33	0	12	9	12
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//oligo-analysis_2025-11-07.201840_n7VJ3Y_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//oligo-analysis_2025-11-07.201840_n7VJ3Y_pssm_count_matrices_logo_m2_rc.png
;
a	8	11	2	1	1	0	31	2	0	9	7	10
c	8	7	16	34	0	0	0	0	35	0	10	5
g	4	7	6	0	1	0	1	0	0	5	6	8
t	15	10	11	0	33	35	3	33	0	21	12	12
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//oligo-analysis_2025-11-07.201840_n7VJ3Y_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//oligo-analysis_2025-11-07.201840_n7VJ3Y_pssm_count_matrices_logo_m3_rc.png
;
a	0	2	0	0	0	4	0	0	0	5	1	1
c	2	0	0	0	5	0	5	4	0	0	1	2
g	2	2	5	0	0	1	0	0	5	0	0	1
t	1	1	0	5	0	0	0	1	0	0	3	1
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//oligo-analysis_2025-11-07.201840_n7VJ3Y_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//oligo-analysis_2025-11-07.201840_n7VJ3Y_pssm_count_matrices_logo_m4_rc.png
;
a	11	11	13	4	36	0	36	36	0	21	10	17	7
c	7	7	10	1	0	2	0	0	1	6	5	3	7
g	5	13	3	31	0	1	0	0	34	7	6	9	9
t	13	5	10	0	0	33	0	0	1	2	15	7	13
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//oligo-analysis_2025-11-07.201840_n7VJ3Y_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//oligo-analysis_2025-11-07.201840_n7VJ3Y_pssm_count_matrices_logo_m5_rc.png
;
a	9	11	11	9	12	3	34	0	34	34	0	19	10	16	7
c	8	4	6	7	10	1	0	1	0	0	1	6	5	2	6
g	8	6	4	13	2	30	0	1	0	0	32	7	6	9	9
t	9	13	13	5	10	0	0	32	0	0	1	2	13	7	12
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//oligo-analysis_2025-11-07.201840_n7VJ3Y_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//oligo-analysis_2025-11-07.201840_n7VJ3Y_pssm_count_matrices_logo_m6_rc.png
;
a	1	4	0	1	0	8	0	1	1	2	2
c	5	3	0	0	12	0	0	11	11	3	2
g	3	3	12	11	0	0	11	0	0	2	6
t	3	2	0	0	0	4	1	0	0	5	2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//oligo-analysis_2025-11-07.201840_n7VJ3Y_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/07//oligo-analysis_2025-11-07.201840_n7VJ3Y_pssm_count_matrices_logo_m7_rc.png
;
; Host name	rsat
; Job started	2025-11-07.201844
; Job done	2025-11-07.201846
; Seconds	0.16
;	user	0.16
;	system	0.03
;	cuser	1.55
;	csystem	0.23