; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/11/13/dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/11/13/dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/11/13/dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_links.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/11/13/dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices.tf
; Input format tf
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/11/13/dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_links.txt
; Output format tab
; pseudo-weight 1
a 5581 6114 11388 11434 11068 2503 11118 10924 2253 1962 5220 5480 5868 5833 5817 5692 5634 5706 5682 5992 5827 5620 5686 5990 6027 11268 11592 11725 11472 11277 2560 5744 5845
c 1677 1765 539 543 574 708 508 462 489 512 1399 1558 1493 1521 1448 1539 1619 1517 1507 1387 1464 1423 1481 1507 1774 613 510 479 478 431 574 1400 1380
g 1604 1543 498 431 523 578 560 620 583 602 1889 1703 1645 1586 1604 1639 1551 1608 1677 1613 1611 1626 1704 1546 1771 573 528 434 443 517 661 1998 1977
t 4982 4422 1419 1436 1679 10055 1658 1838 10519 10768 5336 5103 4838 4904 4975 4974 5040 5013 4978 4852 4942 5175 4973 4801 4272 1390 1214 1206 1451 1619 10049 4702 4642
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m1_rc.png
;
a 16444 17075 32290 32971 33193 32624 32423 16806 16739 16694 16325 16607 16280 15714 15835 15995 15467 15433 15440 15126 14607 18793 6247 30626 30205 5294 4256 13315 14329
c 4349 4680 1495 1374 1260 1306 1160 4297 4153 4053 4362 4435 4599 4606 4436 4243 4297 4287 4409 4732 5162 881 1927 1577 1300 1303 1225 4130 4289
g 4590 5010 1382 1262 1141 1200 1334 4813 4840 5004 5049 4956 4729 4579 4606 4512 4619 4726 4670 4615 4557 769 1770 1787 1658 1321 1481 5155 5099
t 13138 11756 3354 2914 2927 3391 3604 12605 12789 12770 12785 12523 12913 13622 13644 13771 14138 14075 14002 14048 14195 18078 28577 4531 5358 30603 31559 15921 14804
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m2_rc.png
;
a 9000 9366 16787 17429 17575 17333 17035 12827 9503 9296 9277 9400 9114 9031 8950 8891 8659 8803 12664 17140 16446 3713 3421 16213 16183 3586 2861 7546 8094
c 2295 2431 946 853 810 809 765 1659 2163 2146 2171 2249 2320 2341 2240 2278 2486 2633 1832 809 954 1173 1116 946 765 814 811 2254 2408
g 2435 2696 935 778 749 780 926 1856 2587 2662 2644 2612 2578 2548 2470 2469 2513 2531 1648 816 830 983 1151 1190 1014 896 1044 2821 2743
t 7219 6456 2281 1889 1815 2027 2223 4607 6696 6845 6857 6688 6937 7029 7289 7311 7291 6982 4805 2184 2719 15080 15261 2600 2987 15653 16233 8328 7704
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m3_rc.png
;
a 18560 20633 41875 41236 40846 6155 17699 18668 19910 19714 20734 20033 20683 20189 20406 19962 20304 19381 20093 41057 42029 42084 40932 20057 20279
c 6514 6486 1137 1099 1045 1452 4903 4634 5129 5147 5126 5178 4905 4870 4655 4601 4756 5551 6622 1378 1072 984 1036 5098 4808
g 5983 6007 933 795 1025 1730 6716 6561 6093 5960 5679 5358 5758 5600 5775 5904 5842 6069 6560 1252 1042 1020 1204 6259 6318
t 15034 12965 2146 2961 3175 36754 16773 16228 14959 15270 14552 15522 14745 15432 15255 15624 15189 15090 12816 2404 1948 2003 2919 14677 14686
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m4_rc.png
;
a 14118 15983 32432 32734 31172 4997 4644 12371 14367 15318 15387 15236 15285 14753 14944 15020 15010 14575 14085 13944 13680 14740 21108 30864 30625 4628 3629 3636 12700 14624
c 5533 5760 1513 1225 1310 1429 1215 4086 4242 4376 4560 4646 4396 4705 4414 4236 4127 4470 4559 4821 5408 5701 988 1686 1402 1263 1052 1128 4316 4482
g 4508 4376 1107 1066 1318 1391 1636 5403 5460 5102 4802 4554 4369 4137 4322 4408 4626 4466 4596 4543 4361 4308 769 1314 1452 1302 1284 1593 5796 5510
t 14435 12475 3542 3569 4794 30777 31099 16734 14525 13798 13845 14158 14544 14999 14914 14930 14831 15083 15354 15286 15145 13845 15729 4730 5115 31401 32629 32237 15782 13978
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m5_rc.png
;
a 7461 7945 18720 18720 18720 8298 7621 7863 8044 8097 7935 7921 7763 7783 7854 7720 7739 7558 7528 7274 7680 7362 7219 7950 8882 18720 18720 0 6335 7036
c 2551 2928 0 0 0 2301 2083 2168 2105 2080 2246 2290 2313 2182 2214 2212 2183 2260 2180 2192 2152 2295 2485 2576 2509 0 0 0 2182 1998
g 2511 2657 0 0 0 2364 2521 2521 2548 2424 2441 2442 2531 2453 2367 2359 2386 2416 2529 2531 2413 2471 2440 2350 2197 0 0 0 2812 2687
t 6197 5190 0 0 0 5757 6495 6168 6023 6119 6098 6067 6113 6302 6285 6429 6412 6486 6483 6723 6475 6592 6576 5844 5132 0 0 18720 7391 6999
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m6_rc.png
;
a 6894 7731 18013 18013 18013 7510 7343 7407 7649 7452 7300 7275 7133 6954 7437 7446 18013 0 0 5270 6789
c 2550 2833 0 0 0 2147 2063 1961 1935 2078 2254 2151 2262 2207 2338 2462 0 0 0 1987 2028
g 2440 2349 0 0 0 2084 2473 2284 2334 2299 2512 2409 2213 2132 1980 2187 0 0 0 2708 2682
t 6129 5100 0 0 0 6272 6134 6361 6095 6184 5947 6178 6405 6720 6258 5918 0 18013 18013 8048 6514
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m7_rc.png
;
a 14984 16810 34483 33520 3975 2930 12963 14916 15500 15712 15492 15319 15589 15342 15452 15693 15641 15997 16519 16664 16469 16334 16359 16965 34797 35769 35504 34928 17079 16558
c 5383 5424 1006 954 1073 871 4357 4329 4691 4706 4549 4634 4517 4495 4423 4543 4670 4553 4311 4220 4139 4196 4726 5257 1004 775 838 849 4358 4404
g 4713 4579 967 1043 1061 1121 5815 5582 5207 4926 4710 4812 4751 4787 4657 4828 4679 4798 4697 4737 4732 4716 4835 5426 1059 817 835 847 5134 5298
t 13867 12134 2491 3430 32838 34025 15812 14120 13549 13603 14196 14182 14090 14323 14415 13883 13957 13599 13420 13326 13607 13701 13027 11299 2087 1586 1770 2323 12376 12687
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m8_rc.png
;
a 6269 6843 15864 15864 15864 6896 6434 6733 7013 6824 6798 6553 6572 6445 6551 6625 6438 6289 6476 6264 6588 6569 6490 6224 5915 0 15864 15864 7206 6330
c 2176 2388 0 0 0 1854 1814 1731 1679 1780 1934 1945 1894 1892 1840 1879 1884 1875 1929 1934 1866 1878 1801 1905 2170 0 0 0 1844 1914
g 2064 2208 0 0 0 2021 2133 2063 2131 2172 2133 2005 2081 1963 1985 1956 2015 1950 1886 1949 2002 1932 1970 1939 1848 0 0 0 1796 1826
t 5355 4425 0 0 0 5093 5483 5337 5041 5088 4999 5361 5317 5564 5488 5404 5527 5750 5573 5717 5408 5485 5603 5796 5931 15864 0 0 5018 5794
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m9_rc.png
;
a 30845 31866 67827 69875 69519 67510 31284 30978 31544 32266 32042 30999 27920 7058 7120 61220 31057 31642
c 9572 11164 2262 1660 1616 1943 9266 8835 8401 8703 9263 9205 8646 2182 2780 2707 8608 8713
g 9651 10353 1970 1523 1446 1802 9744 10190 9901 9748 9684 9916 9302 1922 3200 3249 10297 9443
t 26300 22985 4309 3310 3787 5113 26074 26365 26522 25651 25379 26248 30500 65206 63268 9192 26406 26570
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m10_rc.png
;
a 9118 10156 20695 20447 20293 2849 9073 9403 9895 9950 10517 10067 10542 10321 10142 10161 10607 10360 20093 20624 20680 20603 20164 10366 10611
c 3173 3137 501 470 402 621 2204 2205 2474 2463 2323 2453 2134 2175 2073 2124 2297 2685 636 519 476 436 419 2369 2176
g 2986 2886 405 313 447 740 3246 3212 2824 2828 2650 2584 2836 2648 2783 2880 2873 3219 607 522 519 489 598 3071 3105
t 7243 6341 919 1290 1378 18310 7997 7700 7327 7279 7030 7416 7008 7376 7522 7355 6743 6256 1184 855 845 992 1339 6714 6628
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m11_rc.png
;
a 7175 7847 18045 0 0 5377 6820 7268 7070 6920 7115 7073 7565 18045 18045 18045 7809 7149
c 2297 2337 0 0 0 2016 1966 2024 2144 2112 2078 2518 2792 0 0 0 2279 2116
g 2038 2232 0 0 0 2656 2627 2438 2247 2275 2210 2211 2411 0 0 0 2170 2498
t 6535 5629 0 18045 18045 7996 6632 6315 6584 6738 6642 6243 5277 0 0 0 5787 6282
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m12_rc.png
;
a 6664 7382 17221 17221 17221 7408 6671 6801 7171 7168 6899 7267 7513 17221 0 0 5141 6245
c 2455 2709 0 0 0 2052 2126 1970 1859 1966 2306 2361 2380 0 0 0 1947 1975
g 2223 2311 0 0 0 2129 2253 2357 2350 2206 2253 1939 2155 0 0 0 2610 2480
t 5879 4819 0 0 0 5632 6171 6093 5841 5881 5763 5654 5173 0 17221 17221 7523 6521
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m13_rc.png
;
a 29821 26711 6223 7839 63467 67763 34505 30669 29675 29927 30227 30601 30878 31022 30345 30396 31300 31627 31854 32186 31661 31528 30376 30272 32912 69023 70012 68976 32636 31071
c 8798 8830 2188 3375 2977 1766 8554 9105 8690 8953 8820 8842 8643 8952 9251 9137 9124 9170 8893 8370 8568 8399 8742 10274 11296 1986 1500 1740 9214 8825
g 9552 8840 1911 3290 3350 2153 9153 9141 9434 9246 9583 9690 9642 9888 9778 9413 9380 9393 9619 9697 9685 9362 9594 9832 10328 1808 1594 1660 9550 10339
t 28746 32536 66595 62413 7123 5235 24705 28002 29118 28791 28287 27784 27754 27055 27543 27971 27113 26727 26551 26664 27003 27628 28205 26539 22381 4100 3811 4541 25517 26682
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m14_rc.png
;
a 4830 5078 9434 9637 9504 9498 9455 4841 5038 5095 4873 5045 4895 4654 4809 4844 4562 4669 5036 4906 9337 9318 1673 9213 8931 1322 1284 4161 4160
c 1149 1247 344 340 308 292 263 1173 1082 1074 1219 1173 1198 1235 1144 1141 1135 1224 1239 1401 390 390 463 307 295 296 267 1076 1195
g 1297 1409 363 320 314 254 331 1414 1393 1352 1390 1339 1272 1351 1323 1246 1348 1324 1203 1306 335 296 431 380 411 337 432 1553 1467
t 3661 3203 796 640 811 893 888 3509 3424 3416 3455 3380 3572 3697 3661 3706 3892 3720 3459 3324 875 933 8370 1037 1300 8982 8954 4147 4115
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m15_rc.png
;
a 6207 6732 15581 15581 15581 6933 6321 6461 6727 6753 6709 6720 6611 6814 6439 6474 6255 6207 6063 6546 6013 6762 6395 7253 6583 15581 0 15581 5859 6669
c 2174 2396 0 0 0 1812 1711 1649 1617 1715 1899 1811 1822 1729 1766 1747 1861 1769 1771 1772 1974 1793 1829 1852 2013 0 0 0 1640 1833
g 2036 2138 0 0 0 1900 2151 2142 2097 2070 1969 2079 2033 1950 1989 1943 1816 1900 1897 1820 1846 1965 1739 1736 1839 0 0 0 2002 1847
t 5164 4315 0 0 0 4936 5398 5329 5140 5043 5004 4971 5115 5088 5387 5417 5649 5705 5850 5443 5748 5061 5618 4740 5146 0 15581 0 6080 5232
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m16_rc.png
;
a 42994 43706 92094 8733 7635 33354 39596 41003 41599 40390 40537 40283 39920 40883 40756 39683 39746 39520 40386 41376 42250 41776 47722 8036 8261 88256 42680 42831
c 15098 15490 3509 2726 2653 13522 13551 13862 14005 14027 14168 14218 13943 13601 13750 14251 14388 14758 14327 13875 14632 13813 1203 2686 3777 4139 13040 13327
g 12497 13333 3241 2712 3148 15904 15136 14304 13714 13051 13027 13096 13287 13122 13567 13511 13265 13042 12709 13172 12763 13263 1326 2408 3926 4933 14751 13641
t 41491 39551 13236 97909 98644 49300 43797 42911 42762 44612 44348 44483 44930 44474 44007 44635 44681 44760 44658 43657 42435 43228 61829 98950 96116 14752 41609 42281
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m17_rc.png
;
a 7345 6736 0 17630 17630 9049 7784 7221 7747 17630 17630 17630 7692 7259
c 1970 2267 0 0 0 1723 1973 2133 2509 0 0 0 2132 2021
g 1926 1958 0 0 0 1821 2045 2243 2280 0 0 0 2239 2432
t 6389 6669 17630 0 0 5037 5828 6033 5094 0 0 0 5567 5918
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m18.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/11/13//dyad-analysis_2025-11-13.022924_FvkVAi_pssm_count_matrices_logo_m18_rc.png
;
; Host name rsat
; Job started 2025-11-13.023140
; Job done 2025-11-13.023240
; Seconds 12.54
; user 12.54
; system 1.52
; cuser 44.34
; csystem 1.98