/var/www/html/rsat/public_html/tmp/www-data/2025/11/25/matrix-clustering_2025-11-25.130017_6Vaxyq/matrix-clustering_tables/alignment_table.tab


id name cluster strand offset_up offset_down width aligned_consensus aligned_consensus_rc
oct4_peak_motifs_m12_oligos_8nt_mkv6_m1_perm1 oligos_8nt_mkv6_m1_perm1 cluster_1 R 9 7 28 +++++++++GGCCTSSCGCSC+++++++ +++++++GsGCGssAGgCC+++++++++
oct4_peak_motifs_m13_oligos_8nt_mkv6_m2_perm1 oligos_8nt_mkv6_m2_perm1 cluster_1 R 8 8 28 ++++++++CRGCCTGYAGCG++++++++ ++++++++CGCtrcaGgCyG++++++++
oct4_peak_motifs_m14_oligos_8nt_mkv6_m3_perm1 oligos_8nt_mkv6_m3_perm1 cluster_1 D 9 7 28 +++++++++TCsCCCGsGTss+++++++ +++++++SSACSCGGGSGA+++++++++
oct4_peak_motifs_m15_oligos_8nt_mkv6_m4_perm1 oligos_8nt_mkv6_m4_perm1 cluster_1 D 9 7 28 +++++++++sGsCCsGCGACs+++++++ +++++++SGTCGCSGGSCS+++++++++
oct4_peak_motifs_m2_oligos_7nt_mkv5_m2_perm1 oligos_7nt_mkv5_m2_perm1 cluster_1 R 9 8 28 +++++++++GWTAAATATWC++++++++ ++++++++GwATATttAwC+++++++++
oct4_peak_motifs_m18_local_words_8nt_m3_perm1 local_words_8nt_m3_perm1 cluster_1 R 7 9 28 +++++++HGWYTAKATCTA+++++++++ +++++++++TAGATmTArwCd+++++++
oct4_peak_motifs_m5_local_words_7nt_m1_perm1 local_words_7nt_m1_perm1 cluster_1 D 10 0 28 ++++++++++gTstATtAdCwAATyGwT AWCRATTWGHTAATASAC++++++++++
oct4_peak_motifs_m7_local_words_7nt_m3_perm1 local_words_7nt_m3_perm1 cluster_1 D 10 4 28 ++++++++++gTAGsTAAwCTAAw++++ ++++WTTAGWTTASCTAC++++++++++
oct4_peak_motifs_m6_local_words_7nt_m2_perm1 local_words_7nt_m2_perm1 cluster_1 R 7 3 28 +++++++DGSWTAYTTATGCATTAW+++ +++wTAaTGCATAArTawsch+++++++
oct4_peak_motifs_m16_local_words_8nt_m1_perm1 local_words_8nt_m1_perm1 cluster_1 R 6 4 28 ++++++AAAHGSACCTATRTAWTW++++ ++++wAwTAyATAGgTsCdTTT++++++
oct4_peak_motifs_m10_positions_7nt_m2_perm1 positions_7nt_m2_perm1 cluster_1 D 9 1 28 +++++++++TAAaTTracshwCAAGTw+ +WACTTGWDSGTYAATTTA+++++++++
oct4_peak_motifs_m17_local_words_8nt_m2_perm1 local_words_8nt_m2_perm1 cluster_1 D 9 1 28 +++++++++TAhArTwcAACTGAAswT+ +AWSTTCAGTTGWAYTDTA+++++++++
oct4_peak_motifs_m3_oligos_7nt_mkv5_m3_perm1 oligos_7nt_mkv5_m3_perm1 cluster_1 D 10 7 28 ++++++++++GSGSGSCASGG+++++++ +++++++CCsTGsCsCsC++++++++++
oct4_peak_motifs_m1_oligos_7nt_mkv5_m1_perm1 oligos_7nt_mkv5_m1_perm1 cluster_1 R 9 7 28 +++++++++TCWWAATWTTCG+++++++ +++++++CgAAwATTwwGA+++++++++
oct4_peak_motifs_m21_positions_8nt_m3_perm1 positions_8nt_m3_perm1 cluster_1 R 5 7 28 +++++AAACCCCGGGTTTTAG+++++++ +++++++CTAaAACccgGGgTTt+++++
oct4_peak_motifs_m4_oligos_7nt_mkv5_m4_perm1 oligos_7nt_mkv5_m4_perm1 cluster_1 R 7 9 28 +++++++YTYTYTKAGATT+++++++++ +++++++++AATCTmArArAr+++++++
oct4_peak_motifs_m19_positions_8nt_m1_perm1 positions_8nt_m1_perm1 cluster_1 D 0 9 28 aAAmtwgTTyACgsTGATT+++++++++ +++++++++AATCASCGTRAACWAKTTT
oct4_peak_motifs_m11_positions_7nt_m4_perm1 positions_7nt_m4_perm1 cluster_1 D 9 5 28 +++++++++GaTCTATyGtrAAC+++++ +++++GTTYACRATAGATC+++++++++
oct4_peak_motifs_m20_positions_8nt_m2_perm1 positions_8nt_m2_perm1 cluster_1 D 8 2 28 ++++++++AACTaryTrGCyTATtAG++ ++CTAATARGCYARYTAGTT++++++++
oct4_peak_motifs_m9_positions_7nt_m1_perm1 positions_7nt_m1_perm1 cluster_1 R 6 2 28 ++++++YTGTATCTTRTGACWAAAAW++ ++wTtTtwGTCAyaAgaTAcAr++++++
oct4_peak_motifs_m8_local_words_7nt_m4_perm1 local_words_7nt_m4_perm1 cluster_1 R 4 2 28 ++++YATTATGKAACTTTGRCAAAMT++ ++AkttTgycAaAGTTmCATAaTr++++
oct4_peak_motifs_m22_positions_8nt_m4_perm1 positions_8nt_m4_perm1 cluster_1 R 8 8 28 ++++++++WTTWCAYGYTTG++++++++ ++++++++CAArCrTGwAAw++++++++