RSAT - peak-motifs result

Analysis: wt_ssD_motifs (25/11/2025 14:46)

peak-motifs  -v 1 -title wt_ssD_motifs -i $RSAT/public_html/tmp/www-data/2025/11/25/peak-motifs.2025-11-25.143236_2025-11-25.143236_C5OFib/peak-motifspeak_seq -max_seq_len 1000 -markov auto -disco oligos,positions -nmotifs 5 -minol 6 -maxol 7 -no_merge_lengths -2str -origin center -motif_db JASPAR2024_CORE_vertebrates_non-redundant tf $RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt -ref_motifs $RSAT/public_html/tmp/www-data/2025/11/25/peak-motifs.2025-11-25.143236_2025-11-25.143236_C5OFib/peak-motifs_ref_motifs.tf -scan_markov 1 -task purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,motifs_vs_db,ref_motifs,motifs_vs_ref,scan -prefix peak-motifs -noov -img_format png -outdir $RSAT/public_html/tmp/www-data/2025/11/25/peak-motifs.2025-11-25.143236_2025-11-25.143236_C5OFib

motif discovery
oligos_6nt_mkv4	oligos_6nt_mkv4_m1 assembly: attttca (sig=237.42; e-value=3.8e-238) RC: tgaaaat oligos_6nt_mkv4_m2 assembly: actgaa (sig=131.45; e-value=3.5e-132) RC: ttcagt oligos_6nt_mkv4_m3 assembly: aaatgagaaac (sig=123.48; e-value=3.3e-124) RC: gtttctcattt oligos_6nt_mkv4_m4 assembly: acaaaac (sig=117.94; e-value=1.1e-118) RC: gttttgt oligos_6nt_mkv4_m5 assembly: ctgtga (sig=104.12; e-value=7.6e-105) RC: tcacag	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
positions_6nt	positions_6nt_m1 assembly: cccccaa (sig=24.47; e-value=3.4e-25) RC: ttggggg positions_6nt_m2 assembly: cccctta (sig=22.89; e-value=1.3e-23) RC: taagggg positions_6nt_m3 assembly: aggttaacct (sig=16.31; e-value=4.9e-17) RC: aggttaacct positions_6nt_m4 assembly: acgtgct (sig=14.57; e-value=2.7e-15) RC: agcacgt positions_6nt_m5 assembly: gtcgcgac (sig=13.68; e-value=2.1e-14) RC: gtcgcgac	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
oligos_7nt_mkv5	oligos_7nt_mkv5_m1 assembly: atttttca (sig=246.03; e-value=9.3e-247) RC: tgaaaaat oligos_7nt_mkv5_m2 assembly: aacacaa (sig=146.61; e-value=2.5e-147) RC: ttgtgtt oligos_7nt_mkv5_m3 assembly: ccacacc (sig=146.32; e-value=4.8e-147) RC: ggtgtgg oligos_7nt_mkv5_m4 assembly: cgaaatc (sig=142.15; e-value=7.1e-143) RC: gatttcg oligos_7nt_mkv5_m5 assembly: cgtcctac (sig=140.48; e-value=3.3e-141) RC: gtaggacg	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
positions_7nt	positions_7nt_m1 assembly: acacacac (sig=59.27; e-value=5.4e-60) RC: gtgtgtgt positions_7nt_m2 assembly: aaaaaaa (sig=51.32; e-value=4.8e-52) RC: ttttttt positions_7nt_m3 assembly: tctctctc (sig=39.97; e-value=1.1e-40) RC: gagagaga positions_7nt_m4 assembly: caaagacac (sig=34.60; e-value=2.5e-35) RC: gtgtctttg positions_7nt_m5 assembly: aagcacgtgctt (sig=31.31; e-value=4.9e-32) RC: aagcacgtgctt	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]

Motif discovery
Motif 1   oligos_6nt_mkv4_m1	k-mer sig=237.42; evalue=3.8e-238 tyATTTTCmdt AHKGAAAATRA	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Reference motifs name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor tyATTTTCmdt Total matches= 0		No match
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor tyATTTTCmdt MEF2A MA0052.5 R 10 0.9091 0.710 0.645 NA NA NFATC4 MA1525.3 R 9 0.8182 0.741 0.607 NA NA Nfat5 MA0606.3 R 8 0.7273 0.832 0.605 NA NA Total matches= 15 (12 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 4038 (1.00%) Max nb of predicted sites per peak: 2  (65349324-881f-4cb5-b36b-80380f46159d_1_3prime) Mean nb of predicted sites per peak: 1.00	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 2   oligos_6nt_mkv4_m2	k-mer sig=131.45; evalue=3.5e-132 amACTGAArr YYTTCAGTKT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Reference motifs name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor amACTGAArr Total matches= 0		No match
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor amACTGAArr Irf1 MA0050.4 D 9 0.7500 0.869 0.652 NA NA ZIM3 MA1709.2 D 10 0.9091 0.710 0.645 NA NA Stat2 MA1623.2 D 9 0.8182 0.762 0.623 NA NA Total matches= 14 (11 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 3157 (0.79%) Max nb of predicted sites per peak: 2  (32f2be1b-17c2-4925-abee-073ec5dae0ec_3_5prime) Mean nb of predicted sites per peak: 1.00	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 3   oligos_6nt_mkv4_m3	k-mer sig=123.48; evalue=3.3e-124 raAAATGAGAAAyay RTRTTTCTCATTTTY	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Reference motifs name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor raAAATGAGAAAyay Total matches= 0		No match
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor raAAATGAGAAAyay Irf1 MA0050.4 D 10 0.6250 0.727 0.455 NA NA PRDM1 MA0508.4 R 7 0.4667 0.859 0.401 NA NA Total matches= 2		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 2062 (0.51%) Max nb of predicted sites per peak: 1  (ff2c88d2-406b-490e-b1a3-18835f7bb30d_2_3prime) Mean nb of predicted sites per peak: 1.00	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 4   oligos_6nt_mkv4_m4	k-mer sig=117.94; evalue=1.1e-118 mwaCAAAACaa TTGTTTTGTWK	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Reference motifs name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor mwaCAAAACaa Total matches= 0		No match
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor mwaCAAAACaa SRY MA0084.2 D 7 0.6364 0.809 0.515 NA NA HOXB13 MA0901.3 D 8 0.6667 0.714 0.476 NA NA ZBED2 MA1971.2 D 7 0.6364 0.710 0.452 NA NA Total matches= 8 (5 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 1696 (0.42%) Max nb of predicted sites per peak: 2  (fffe60bc-2e89-472e-8c69-03ad72b20053_1_3prime) Mean nb of predicted sites per peak: 1.12	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 5   oligos_6nt_mkv4_m5	k-mer sig=104.12; evalue=7.6e-105 ybCTGTGAss SSTCACAGVR	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Reference motifs name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ybCTGTGAss Total matches= 0		No match
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ybCTGTGAss GFI1 MA0038.3 R 10 0.9091 0.723 0.657 NA NA Gfi1B MA0483.2 R 9 0.8182 0.714 0.584 NA NA MEIS2 MA0774.1 R 8 0.8000 0.711 0.569 NA NA Total matches= 9 (6 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 1871 (0.47%) Max nb of predicted sites per peak: 2  (6c7eb941-aab1-4b96-9457-ba2ed464efa2_1_3prime) Mean nb of predicted sites per peak: 1.00	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 6   positions_6nt_m1	k-mer sig=24.47; evalue=3.4e-25 ckCCCCCAacs SGTTGGGGGMG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Reference motifs name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ckCCCCCAacs Total matches= 0		No match
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ckCCCCCAacs INSM1 MA0155.1 R 11 0.9167 0.744 0.682 NA NA ZNF740 MA0753.3 D 10 0.9091 0.731 0.665 NA NA Wt1 MA1627.2 D 9 0.7500 0.799 0.600 NA NA Total matches= 22 (19 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 1568 (0.39%) Max nb of predicted sites per peak: 3  (af1d7ca2-c6d5-438f-9c5f-c139112ba174_0_5prime) Mean nb of predicted sites per peak: 1.02	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 7   positions_6nt_m2	k-mer sig=22.89; evalue=1.3e-23 wwCCCCTTAyy RRTAAGGGGWW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Reference motifs name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wwCCCCTTAyy Total matches= 0		No match
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wwCCCCTTAyy Nkx3-2 MA0122.4 D 10 0.9091 0.765 0.696 NA NA Nkx3-1 MA0124.3 D 7 0.6364 0.778 0.495 NA NA GATA4 MA0482.3 D 7 0.5833 0.822 0.479 NA NA Total matches= 11 (8 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 351 (0.09%) Max nb of predicted sites per peak: 1  (fee9362f-38aa-49bf-9ac1-027bb6da8d6a_2_5prime) Mean nb of predicted sites per peak: 1.00	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 8   positions_6nt_m3	k-mer sig=16.31; evalue=4.9e-17 ycAGGTTAACCTgr YCAGGTTAACCTGR	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Reference motifs name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ycAGGTTAACCTgr Total matches= 0		No match
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ycAGGTTAACCTgr Six4 MA2001.2 D 7 0.5000 0.845 0.422 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 164 (0.04%) Max nb of predicted sites per peak: 2  (ff5825a4-490b-4230-810d-0aa5c316c675_1_3prime) Mean nb of predicted sites per peak: 1.91	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 9   positions_6nt_m4	k-mer sig=14.57; evalue=2.7e-15 scACGTGCtav BTAGCACGTGS	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Reference motifs name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor scACGTGCtav Total matches= 0		No match
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor scACGTGCtav EPAS1 MA2325.1 R 9 0.8182 0.846 0.693 NA NA SOHLH2 MA1560.2 D 8 0.7273 0.920 0.669 NA NA HES2 MA0616.3 R 9 0.8182 0.780 0.638 NA NA Total matches= 37 (34 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 1432 (0.36%) Max nb of predicted sites per peak: 10  (3fb48f73-bda4-4efc-8e60-1ebe8f64ae75_0_5prime) Mean nb of predicted sites per peak: 1.14	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 10   positions_6nt_m5	k-mer sig=13.68; evalue=2.1e-14 ssGtCGCGaCss SSGTCGCGACSS	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Reference motifs name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ssGtCGCGaCss Total matches= 0		No match
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ssGtCGCGaCss ZBED1 MA0749.2 R 11 0.8462 0.768 0.650 NA NA Npas4 MA1995.2 R 7 0.5833 0.749 0.437 NA NA Total matches= 2		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 757 (0.19%) Max nb of predicted sites per peak: 8  (c064732d-d6ba-4c93-b5a8-ab3b7f1198a0_2_3prime) Mean nb of predicted sites per peak: 2.53	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 11   oligos_7nt_mkv5_m1	k-mer sig=246.03; evalue=9.3e-247 tcATTTTTCAyk MRTGAAAAATGA	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Reference motifs name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor tcATTTTTCAyk Total matches= 0		No match
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor tcATTTTTCAyk Nfat5 MA0606.3 R 8 0.6667 0.831 0.554 NA NA NFATC4 MA1525.3 R 9 0.7500 0.717 0.538 NA NA Nfatc2 MA0152.3 R 8 0.6667 0.785 0.523 NA NA Total matches= 10 (7 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 3804 (0.95%) Max nb of predicted sites per peak: 2  (f0ffd1a4-18be-4361-9d2d-5e0f394bdb84_2_5prime) Mean nb of predicted sites per peak: 1.03	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 12   oligos_7nt_mkv5_m2	k-mer sig=146.61; evalue=2.5e-147 wwAACACAAwm KWTTGTGTTWW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Reference motifs name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wwAACACAAwm Total matches= 0		No match
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wwAACACAAwm Stat2 MA1623.2 D 10 0.9091 0.703 0.639 NA NA ZIM3 MA1709.2 D 10 0.8333 0.754 0.628 NA NA Bcl11B MA1989.2 D 9 0.8182 0.738 0.604 NA NA Total matches= 29 (26 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 1278 (0.32%) Max nb of predicted sites per peak: 2  (75887a6f-529a-439d-bf36-8e140bdf25a0_1_5prime) Mean nb of predicted sites per peak: 1.00	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 13   oligos_7nt_mkv5_m3	k-mer sig=146.32; evalue=4.8e-147 rmCCACACChc GDGGTGTGGKY	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Reference motifs name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor rmCCACACChc Total matches= 0		No match
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor rmCCACACChc TBX20 MA0689.1 R 11 1.0000 0.732 0.732 NA NA KLF9 MA1107.3 D 10 0.8333 0.852 0.710 NA NA KLF5 MA0599.1 D 10 0.9091 0.737 0.670 NA NA Total matches= 36 (33 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 1123 (0.28%) Max nb of predicted sites per peak: 2  (e7abae50-a5db-4c41-8a10-dc846e0bd4f2_0_5prime) Mean nb of predicted sites per peak: 1.01	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 14   oligos_7nt_mkv5_m4	k-mer sig=142.15; evalue=7.1e-143 gwCGAAATCas STGATTTCGWC	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Reference motifs name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor gwCGAAATCas Total matches= 0		No match
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor gwCGAAATCas ZBED2 MA1971.2 D 7 0.6364 0.789 0.502 NA NA Nanog MA2339.1 D 7 0.6364 0.741 0.472 NA NA Gfi1B MA0483.2 D 7 0.5000 0.919 0.460 NA NA Total matches= 5 (2 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 802 (0.20%) Max nb of predicted sites per peak: 1  (ff9c9109-b9a3-43fd-a96f-5493ef2f0045_2_3prime) Mean nb of predicted sites per peak: 1.00	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 15   oligos_7nt_mkv5_m5	k-mer sig=140.48; evalue=3.3e-141 caCGTCCTaCms SKGTAGGACGTG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Reference motifs name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor caCGTCCTaCms Total matches= 0		No match
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor caCGTCCTaCms ZKSCAN1 MA1585.2 R 8 0.6154 0.703 0.433 NA NA ZNF263 MA0528.3 R 7 0.5833 0.712 0.415 NA NA Total matches= 2		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 1230 (0.31%) Max nb of predicted sites per peak: 8  (3fb48f73-bda4-4efc-8e60-1ebe8f64ae75_0_5prime) Mean nb of predicted sites per peak: 1.02	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 16   positions_7nt_m1	k-mer sig=59.27; evalue=5.4e-60 aCACACACACaC GTGTGTGTGTGT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Reference motifs name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor aCACACACACaC Total matches= 0		No match
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor aCACACACACaC KLF9 MA1107.3 D 11 0.9167 0.707 0.648 NA NA MSANTD3 MA1523.2 D 7 0.5833 0.742 0.433 NA NA Total matches= 2		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 6277 (1.56%) Max nb of predicted sites per peak: 5  (fffdb932-b251-47fb-968a-f33f5a4de203_2_5prime) Mean nb of predicted sites per peak: 3.01	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 17   positions_7nt_m2	k-mer sig=51.32; evalue=4.8e-52 aaAAAAAAAaa TTTTTTTTTTT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Reference motifs name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor aaAAAAAAAaa Total matches= 0		No match
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor aaAAAAAAAaa ZNF384 MA1125.2 D 8 0.7273 0.997 0.725 NA NA FOXE1 MA1487.3 D 10 0.7692 0.701 0.539 NA NA Hmga1 MA2124.1 R 7 0.5833 0.724 0.422 NA NA Total matches= 4 (1 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 4620 (1.15%) Max nb of predicted sites per peak: 10  (ffbebe5b-5f9f-404b-aaf4-2c4c2ab9a4f4_0_5prime) Mean nb of predicted sites per peak: 4.18	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 18   positions_7nt_m3	k-mer sig=39.97; evalue=1.1e-40 tCTCTCTCTCtC GAGAGAGAGAGA	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Reference motifs name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor tCTCTCTCTCtC Total matches= 0		No match
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor tCTCTCTCTCtC PRDM1 MA0508.4 D 7 0.5833 0.821 0.479 NA NA ZNF768 MA1731.2 D 8 0.6154 0.733 0.451 NA NA Total matches= 2		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 3881 (0.97%) Max nb of predicted sites per peak: 5  (ff6f1514-b980-4d99-931a-bc79095d6d35_1_3prime) Mean nb of predicted sites per peak: 2.76	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 19   positions_7nt_m4	k-mer sig=34.60; evalue=2.5e-35 crCAaAGACACvs SBGTGTCTTTGYG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Reference motifs name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor crCAaAGACACvs Total matches= 0		No match
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor crCAaAGACACvs SOX4 MA0867.3 D 8 0.6154 0.781 0.481 NA NA TCF7 MA0769.3 R 7 0.5385 0.830 0.447 NA NA Sox11 MA0869.3 D 7 0.5000 0.886 0.443 NA NA Total matches= 4 (1 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 5027 (1.25%) Max nb of predicted sites per peak: 4  (fffdb932-b251-47fb-968a-f33f5a4de203_2_5prime) Mean nb of predicted sites per peak: 2.34	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 20   positions_7nt_m5	k-mer sig=31.31; evalue=4.9e-32 gyaaGCACGTGCttgc GCAAGCACGTGCTTRC	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Reference motifs name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor gyaaGCACGTGCttgc Total matches= 0		No match
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor gyaaGCACGTGCttgc MAX::MYC MA0059.2 R 10 0.6250 0.798 0.499 NA NA HES5 MA0821.2 R 10 0.6250 0.792 0.495 NA NA HEY1 MA0823.1 R 10 0.6250 0.777 0.485 NA NA Total matches= 18 (15 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 358 (0.09%) Max nb of predicted sites per peak: 6  (f03a283e-0302-45f0-b06d-0559e97d8ee1_3_5prime) Mean nb of predicted sites per peak: 2.15	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]

Command:  peak-motifs  -v 1 -title wt_ssD_motifs -i $RSAT/public_html/tmp/www-data/2025/11/25/peak-motifs.2025-11-25.143236_2025-11-25.143236_C5OFib/peak-motifspeak_seq -max_seq_len 1000 -markov auto -disco oligos,positions -nmotifs 5 -minol 6 -maxol 7 -no_merge_lengths -2str -origin center -motif_db JASPAR2024_CORE_vertebrates_non-redundant tf $RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt -ref_motifs $RSAT/public_html/tmp/www-data/2025/11/25/peak-motifs.2025-11-25.143236_2025-11-25.143236_C5OFib/peak-motifs_ref_motifs.tf -scan_markov 1 -task purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,motifs_vs_db,ref_motifs,motifs_vs_ref,scan -prefix peak-motifs -noov -img_format png -outdir $RSAT/public_html/tmp/www-data/2025/11/25/peak-motifs.2025-11-25.143236_2025-11-25.143236_C5OFib