| Matrix name | Aligned logos | cor |
Ncor |
Aligned matrices |
|---|
| oligos_6nt_mkv4_m1_shift4 (oligos_6nt_mkv4_m1) |
 |
  |
  |
; oligos_6nt_mkv4_m1; m=0 (reference); ncol1=11; shift=4; ncol=15; ----wyATTTTCawt
; Alignment reference
a 0 0 0 0 3044 2292 10859 90 536 472 470 445 6607 3433 2463
c 0 0 0 0 1685 3133 12 34 50 69 66 10225 2621 1826 1842
g 0 0 0 0 1579 2146 54 32 151 98 49 47 120 2520 1854
t 0 0 0 0 5156 3893 539 11308 10727 10825 10879 747 2116 3685 5305
|
| MA0052.5_rc_shift4 (MEF2A_rc) |
 |
|
|
; oligos_6nt_mkv4_m1 versus MA0052.5_rc (MEF2A_rc); m=1/15; ncol2=10; w=0; offset=0; strand=R; shift=4; score=0.645453; ----CTATTTTTAg-
; cor=; Ncor=
a 0 0 0 0 1432.0 108.0 15157.0 831.0 1237.0 835.0 2167.0 1646.0 12325.0 2252.0 0
c 0 0 0 0 11104.0 422.0 215.0 202.0 241.0 506.0 610.0 1066.0 236.0 1007.0 0
g 0 0 0 0 1060.0 50.0 349.0 173.0 231.0 141.0 253.0 1013.0 2974.0 10919.0 0
t 0 0 0 0 2566.0 15582.0 441.0 14956.0 14453.0 14680.0 13132.0 12437.0 627.0 1984.0 0
|
| MA1525.3_rc_shift6 (NFATC4_rc) |
 |
|
|
; oligos_6nt_mkv4_m1 versus MA1525.3_rc (NFATC4_rc); m=2/15; ncol2=9; w=0; offset=2; strand=R; shift=6; score=0.606657; ------wkTTTCCrt
; cor=; Ncor=
a 0 0 0 0 0 0 3012.0 1164.0 107.0 0.0 0.0 0.0 0.0 4553.0 1505.0
c 0 0 0 0 0 0 138.0 1149.0 42.0 0.0 0.0 7139.0 7139.0 43.0 2590.0
g 0 0 0 0 0 0 1280.0 6522.0 460.0 0.0 0.0 0.0 0.0 2586.0 715.0
t 0 0 0 0 0 0 2709.0 7139.0 7139.0 7139.0 7139.0 0.0 0.0 16.0 7139.0
|
| MA0606.3_rc_shift7 (Nfat5_rc) |
 |
|
|
; oligos_6nt_mkv4_m1 versus MA0606.3_rc (Nfat5_rc); m=3/15; ncol2=8; w=0; offset=3; strand=R; shift=7; score=0.605097; -------TTTTCCAT
; cor=; Ncor=
a 0 0 0 0 0 0 0 14.0 10.0 9.0 5.0 7.0 11.0 302.0 13.0
c 0 0 0 0 0 0 0 19.0 8.0 10.0 15.0 325.0 332.0 9.0 47.0
g 0 0 0 0 0 0 0 8.0 4.0 1.0 8.0 8.0 0.0 10.0 17.0
t 0 0 0 0 0 0 0 315.0 334.0 336.0 328.0 16.0 13.0 35.0 279.0
|
| MA0041.3_rc_shift1 (FOXD3_rc) |
 |
|
|
; oligos_6nt_mkv4_m1 versus MA0041.3_rc (FOXD3_rc); m=4/15; ncol2=14; w=-3; offset=-3; strand=R; shift=1; score=0.584918; -tGTTTRTTTdywtw
; cor=; Ncor=
a 0 47.0 30.0 35.0 11.0 7.0 128.0 2.0 7.0 2.0 171.0 10.0 81.0 22.0 85.0
c 0 30.0 13.0 20.0 8.0 2.0 0.0 7.0 0.0 1.0 8.0 115.0 45.0 52.0 13.0
g 0 20.0 171.0 17.0 11.0 4.0 43.0 1.0 8.0 37.0 109.0 17.0 45.0 17.0 22.0
t 0 125.0 13.0 171.0 171.0 171.0 0.0 171.0 171.0 171.0 99.0 56.0 91.0 120.0 86.0
|
| MA2124.1_shift6 (Hmga1) |
 |
|
|
; oligos_6nt_mkv4_m1 versus MA2124.1 (Hmga1); m=5/15; ncol2=8; w=0; offset=2; strand=D; shift=6; score=0.57936; ------ATTTTTAw-
; cor=; Ncor=
a 0 0 0 0 0 0 25051.0 820.0 1034.0 695.0 651.0 770.0 24433.0 9680.0 0
c 0 0 0 0 0 0 71.0 393.0 200.0 194.0 264.0 409.0 473.0 2348.0 0
g 0 0 0 0 0 0 188.0 421.0 303.0 138.0 237.0 294.0 358.0 2438.0 0
t 0 0 0 0 0 0 496.0 24172.0 24269.0 24779.0 24654.0 24333.0 542.0 11340.0 0
|
| MA0627.3_rc_shift6 (POU2F3_rc) |
 |
|
|
; oligos_6nt_mkv4_m1 versus MA0627.3_rc (POU2F3_rc); m=6/15; ncol2=9; w=0; offset=2; strand=R; shift=6; score=0.573047; ------ATTTGCATa
; cor=; Ncor=
a 0 0 0 0 0 0 43338.0 330.0 3276.0 896.0 3716.0 2827.0 53366.0 931.0 37593.0
c 0 0 0 0 0 0 4098.0 233.0 804.0 138.0 1079.0 51971.0 1251.0 354.0 3029.0
g 0 0 0 0 0 0 3478.0 164.0 567.0 80.0 50288.0 251.0 322.0 194.0 6885.0
t 0 0 0 0 0 0 5115.0 55302.0 51382.0 54915.0 946.0 980.0 1090.0 54550.0 8522.0
|
| MA0050.4_rc_shift2 (Irf1_rc) |
 |
|
|
; oligos_6nt_mkv4_m1 versus MA0050.4_rc (Irf1_rc); m=7/15; ncol2=11; w=-2; offset=-2; strand=R; shift=2; score=0.519092; --TTTCAgTTTCa--
; cor=; Ncor=
a 0 0 496.0 364.0 422.0 296.0 12533.0 564.0 346.0 334.0 483.0 660.0 8589.0 0 0
c 0 0 607.0 499.0 775.0 14013.0 274.0 3315.0 240.0 258.0 1024.0 12682.0 2035.0 0 0
g 0 0 365.0 353.0 298.0 314.0 933.0 9822.0 176.0 253.0 361.0 637.0 1292.0 0 0
t 0 0 14172.0 14424.0 14145.0 1017.0 1900.0 1939.0 14878.0 14795.0 13772.0 1661.0 3724.0 0 0
|
| MA0152.3_rc_shift7 (Nfatc2_rc) |
 |
|
|
; oligos_6nt_mkv4_m1 versus MA0152.3_rc (Nfatc2_rc); m=8/15; ncol2=8; w=0; offset=3; strand=R; shift=7; score=0.514543; -------TTTCCATt
; cor=; Ncor=
a 0 0 0 0 0 0 0 112.0 35.0 41.0 46.0 26.0 2844.0 121.0 321.0
c 0 0 0 0 0 0 0 79.0 45.0 65.0 3133.0 3118.0 101.0 329.0 292.0
g 0 0 0 0 0 0 0 104.0 19.0 38.0 27.0 17.0 124.0 206.0 460.0
t 0 0 0 0 0 0 0 2944.0 3140.0 3095.0 33.0 78.0 170.0 2583.0 2166.0
|
| MA0772.2_rc_shift6 (IRF7_rc) |
 |
|
|
; oligos_6nt_mkv4_m1 versus MA0772.2_rc (IRF7_rc); m=9/15; ncol2=13; w=0; offset=2; strand=R; shift=6; score=0.470661; ------AbTTTCryT
; cor=; Ncor=
a 0 0 0 0 0 0 804.0 301.0 41.0 1.0 5.0 7.0 375.0 17.0 1.0
c 0 0 0 0 0 0 31.0 1235.0 7.0 3.0 4.0 957.0 2.0 505.0 1.0
g 0 0 0 0 0 0 153.0 957.0 10.0 3.0 16.0 3.0 582.0 156.0 2.0
t 0 0 0 0 0 0 160.0 1184.0 957.0 957.0 957.0 30.0 8.0 279.0 957.0
|
| MA0517.2_shift6 (STAT1::STAT2) |
 |
|
|
; oligos_6nt_mkv4_m1 versus MA0517.2 (STAT1::STAT2); m=10/15; ncol2=13; w=0; offset=2; strand=D; shift=6; score=0.441144; ------AGTTTCrkT
; cor=; Ncor=
a 0 0 0 0 0 0 430.0 3.0 0.0 3.0 3.0 0.0 255.0 107.0 4.0
c 0 0 0 0 0 0 7.0 148.0 2.0 2.0 13.0 581.0 75.0 111.0 13.0
g 0 0 0 0 0 0 151.0 467.0 0.0 0.0 4.0 0.0 191.0 161.0 10.0
t 0 0 0 0 0 0 32.0 2.0 618.0 615.0 600.0 39.0 99.0 241.0 593.0
|
| MA0624.3_rc_shift8 (Nfatc1_rc) |
 |
|
|
; oligos_6nt_mkv4_m1 versus MA0624.3_rc (Nfatc1_rc); m=11/15; ncol2=6; w=0; offset=4; strand=R; shift=8; score=0.436371; --------TTTCCA-
; cor=; Ncor=
a 0 0 0 0 0 0 0 0 124.0 39.0 54.0 55.0 17.0 5771.0 0
c 0 0 0 0 0 0 0 0 43.0 32.0 27.0 6058.0 6106.0 65.0 0
g 0 0 0 0 0 0 0 0 77.0 13.0 30.0 16.0 13.0 227.0 0
t 0 0 0 0 0 0 0 0 5947.0 6107.0 6080.0 62.0 55.0 128.0 0
|
| MA0625.3_rc_shift8 (NFATC3_rc) |
 |
|
|
; oligos_6nt_mkv4_m1 versus MA0625.3_rc (NFATC3_rc); m=12/15; ncol2=6; w=0; offset=4; strand=R; shift=8; score=0.424044; --------tTTCCr-
; cor=; Ncor=
a 0 0 0 0 0 0 0 0 1089.0 0.0 8.0 0.0 0.0 3553.0 0
c 0 0 0 0 0 0 0 0 475.0 184.0 825.0 5866.0 5866.0 451.0 0
g 0 0 0 0 0 0 0 0 1586.0 0.0 261.0 0.0 0.0 2313.0 0
t 0 0 0 0 0 0 0 0 5866.0 5866.0 5866.0 0.0 0.0 289.0 0
|
| MA1125.2_rc_shift3 (ZNF384_rc) |
 |
|
|
; oligos_6nt_mkv4_m1 versus MA1125.2_rc (ZNF384_rc); m=13/15; ncol2=8; w=-1; offset=-1; strand=R; shift=3; score=0.411367; ---ttTTTTTT----
; cor=; Ncor=
a 0 0 0 4656.0 4436.0 21.0 191.0 153.0 314.0 188.0 59.0 0 0 0 0
c 0 0 0 2898.0 2767.0 0.0 14.0 15.0 26.0 19.0 13.0 0 0 0 0
g 0 0 0 3963.0 2908.0 6.0 26.0 13.0 21.0 35.0 7.0 0 0 0 0
t 0 0 0 18916.0 20322.0 30406.0 30202.0 30252.0 30072.0 30191.0 30354.0 0 0 0 0
|
| MA1623.2_rc_shift8 (Stat2_rc) |
 |
|
|
; oligos_6nt_mkv4_m1 versus MA1623.2_rc (Stat2_rc); m=14/15; ncol2=10; w=0; offset=4; strand=R; shift=8; score=0.405568; --------TTTCTGT
; cor=; Ncor=
a 0 0 0 0 0 0 0 0 141.0 69.0 47.0 55.0 588.0 242.0 62.0
c 0 0 0 0 0 0 0 0 157.0 98.0 163.0 3707.0 74.0 524.0 87.0
g 0 0 0 0 0 0 0 0 147.0 45.0 49.0 45.0 151.0 2907.0 72.0
t 0 0 0 0 0 0 0 0 3514.0 3747.0 3700.0 152.0 3146.0 286.0 3738.0
|
| MA0757.2_rc_shift0 (ONECUT3_rc) |
 |
|
|
; oligos_6nt_mkv4_m1 versus MA0757.2_rc (ONECUT3_rc); m=15/15; ncol2=12; w=-4; offset=-4; strand=R; shift=0; score=0.404906; tTATyGATTTTt---
; cor=; Ncor=
a 1182.0 345.0 6080.0 22.0 11.0 5.0 6080.0 11.0 54.0 1221.0 878.0 709.0 0 0 0
c 417.0 187.0 7.0 9.0 2130.0 3.0 14.0 41.0 102.0 112.0 498.0 1141.0 0 0 0
g 861.0 105.0 6.0 6.0 20.0 6080.0 103.0 5.0 28.0 173.0 274.0 379.0 0 0 0
t 3620.0 6080.0 43.0 6080.0 3950.0 23.0 32.0 6080.0 6080.0 6080.0 6080.0 3851.0 0 0 0
|