One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2025/11/25/peak-motifs.2025-11-25.143236_2025-11-25.143236_C5OFib/results/discovered_motifs/positions_6nt_m1/peak-motifs_positions_6nt_m1.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2025/11/25/peak-motifs.2025-11-25.143236_2025-11-25.143236_C5OFib/results/discovered_motifs/positions_6nt_m1/peak-motifs_positions_6nt_m1_vs_db_JASPAR2024_CORE_vertebrates_non-redundant

One-to-n matrix alignment; reference matrix: positions_6nt_m1_shift4 ; 23 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
positions_6nt_m1_shift4 (positions_6nt_m1)
; positions_6nt_m1; m=0 (reference); ncol1=11; shift=4; ncol=15; ----ywCCCCCAayc ; Alignment reference a 0 0 0 0 1278 1381 138 72 156 139 84 4559 2672 1224 1273 c 0 0 0 0 1545 1091 4886 4954 4843 4824 4695 168 1000 1674 1681 g 0 0 0 0 989 1147 63 90 109 172 195 184 823 929 1140 t 0 0 0 0 1364 1557 89 60 68 41 202 265 681 1349 1082

MA0155.1_rc_shift4 (INSM1_rc)
; positions_6nt_m1 versus MA0155.1_rc (INSM1_rc); m=1/22; ncol2=12; w=0; offset=0; strand=R; shift=4; score=0.681642; ----ygmCCCCwkrC ; cor=; Ncor= a 0 0 0 0 2.0 5.0 6.0 0.0 0.0 0.0 0.0 8.0 3.0 13.0 4.0 c 0 0 0 0 12.0 0.0 16.0 24.0 24.0 23.0 24.0 0.0 0.0 3.0 20.0 g 0 0 0 0 0.0 16.0 2.0 0.0 0.0 1.0 0.0 0.0 15.0 8.0 0.0 t 0 0 0 0 10.0 3.0 0.0 0.0 0.0 0.0 0.0 16.0 6.0 0.0 0.0

MA0753.3_shift4 (ZNF740)
; positions_6nt_m1 versus MA0753.3 (ZNF740); m=2/22; ncol2=10; w=0; offset=0; strand=D; shift=4; score=0.664841; ----CCCCCCCCAc- ; cor=; Ncor= a 0 0 0 0 60.0 110.0 18.0 22.0 23.0 10.0 2.0 115.0 1055.0 207.0 0 c 0 0 0 0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 239.0 1055.0 0 g 0 0 0 0 37.0 14.0 4.0 7.0 3.0 7.0 3.0 6.0 68.0 54.0 0 t 0 0 0 0 49.0 1.0 16.0 15.0 11.0 6.0 3.0 4.0 134.0 246.0 0

MA1627.2_shift3 (Wt1)
; positions_6nt_m1 versus MA1627.2 (Wt1); m=3/22; ncol2=10; w=-1; offset=-1; strand=D; shift=3; score=0.599509; ---cCTCCCCCAC-- ; cor=; Ncor= a 0 0 0 839.0 48.0 120.0 21.0 40.0 43.0 850.0 31.0 3294.0 158.0 0 0 c 0 0 0 2948.0 4546.0 69.0 4602.0 4354.0 4252.0 3636.0 4573.0 53.0 3749.0 0 0 g 0 0 0 404.0 58.0 319.0 42.0 75.0 120.0 101.0 46.0 990.0 436.0 0 0 t 0 0 0 500.0 39.0 4183.0 26.0 222.0 276.0 104.0 41.0 354.0 348.0 0 0

MA0737.1_shift3 (GLIS3)
; positions_6nt_m1 versus MA0737.1 (GLIS3); m=4/22; ncol2=14; w=-1; offset=-1; strand=D; shift=3; score=0.575014; ---KACCCCCCACgA ; cor=; Ncor= a 0 0 0 8.0 422.0 0.0 0.0 2.0 0.0 4.0 0.0 886.0 1.0 226.0 529.0 c 0 0 0 41.0 2.0 289.0 280.0 309.0 288.0 200.0 211.0 1.0 204.0 17.0 2.0 g 0 0 0 674.0 13.0 1.0 0.0 0.0 0.0 0.0 0.0 67.0 8.0 648.0 31.0 t 0 0 0 258.0 0.0 1.0 0.0 9.0 1.0 0.0 20.0 9.0 17.0 78.0 87.0

MA0039.5_shift7 (KLF4)
; positions_6nt_m1 versus MA0039.5 (KLF4); m=5/22; ncol2=8; w=0; offset=3; strand=D; shift=7; score= 0.5567; -------CCCCACCC ; cor=; Ncor= a 0 0 0 0 0 0 0 2465.0 2105.0 7021.0 1173.0 45602.0 852.0 1617.0 1202.0 c 0 0 0 0 0 0 0 49209.0 47865.0 45405.0 52875.0 161.0 52366.0 51112.0 51045.0 g 0 0 0 0 0 0 0 1583.0 1214.0 1422.0 793.0 6598.0 1470.0 1870.0 1005.0 t 0 0 0 0 0 0 0 2560.0 4633.0 1969.0 976.0 3456.0 1129.0 1218.0 2565.0

MA0767.2_rc_shift5 (GCM2_rc)
; positions_6nt_m1 versus MA0767.2_rc (GCM2_rc); m=6/22; ncol2=8; w=0; offset=1; strand=R; shift=5; score=0.523425; -----rCCCGCAT-- ; cor=; Ncor= a 0 0 0 0 0 1320.0 0.0 13.0 66.0 127.0 0.0 1320.0 45.0 0 0 c 0 0 0 0 0 91.0 1320.0 1320.0 1320.0 138.0 1320.0 24.0 299.0 0 0 g 0 0 0 0 0 533.0 0.0 0.0 1.0 1320.0 32.0 41.0 77.0 0 0 t 0 0 0 0 0 92.0 1.0 0.0 51.0 84.0 263.0 23.0 1320.0 0 0

MA0735.2_shift2 (GLIS1)
; positions_6nt_m1 versus MA0735.2 (GLIS1); m=7/22; ncol2=15; w=-2; offset=-2; strand=D; shift=2; score=0.519282; --mGACCCCCCACGW ; cor=; Ncor= a 0 0 3236.0 3.0 6314.0 0.0 4.0 0.0 3.0 0.0 6.0 6781.0 0.0 7.0 5759.0 c 0 0 1842.0 44.0 0.0 4807.0 4769.0 4796.0 4817.0 4702.0 4505.0 3.0 4549.0 0.0 4.0 g 0 0 100.0 8617.0 6.0 2.0 2.0 11.0 5.0 0.0 5.0 160.0 0.0 10081.0 32.0 t 0 0 891.0 1016.0 8.0 0.0 3.0 0.0 2.0 7.0 2.0 6.0 0.0 51.0 2024.0

MA1578.2_shift5 (VEZF1)
; positions_6nt_m1 versus MA1578.2 (VEZF1); m=8/22; ncol2=6; w=0; offset=1; strand=D; shift=5; score=0.512218; -----CCCCCC---- ; cor=; Ncor= a 0 0 0 0 0 71.0 1.0 4.0 2.0 6.0 10.0 0 0 0 0 c 0 0 0 0 0 790.0 997.0 995.0 997.0 989.0 977.0 0 0 0 0 g 0 0 0 0 0 137.0 0.0 0.0 0.0 0.0 3.0 0 0 0 0 t 0 0 0 0 0 0.0 0.0 0.0 0.0 4.0 8.0 0 0 0 0

MA1987.2_rc_shift4 (ZNF701_rc)
; positions_6nt_m1 versus MA1987.2_rc (ZNF701_rc); m=9/22; ncol2=17; w=0; offset=0; strand=R; shift=4; score=0.490143; ----TyCCCCCyttr ; cor=; Ncor= a 0 0 0 0 110.0 27.0 15.0 62.0 15.0 3.0 27.0 86.0 217.0 205.0 265.0 c 0 0 0 0 146.0 455.0 872.0 753.0 920.0 979.0 896.0 384.0 217.0 193.0 146.0 g 0 0 0 0 51.0 86.0 3.0 3.0 51.0 3.0 3.0 98.0 122.0 158.0 503.0 t 0 0 0 0 693.0 432.0 110.0 182.0 15.0 15.0 74.0 432.0 443.0 443.0 86.0

MA1630.3_rc_shift1 (ZNF281_rc)
; positions_6nt_m1 versus MA1630.3_rc (ZNF281_rc); m=10/22; ncol2=10; w=-3; offset=-3; strand=R; shift=1; score=0.467465; -CCCCTCCCCC---- ; cor=; Ncor= a 0 7.0 18.0 1.0 105.0 96.0 1.0 1.0 1.0 1.0 1.0 0 0 0 0 c 0 920.0 940.0 998.0 772.0 1.0 998.0 998.0 963.0 998.0 998.0 0 0 0 0 g 0 27.0 1.0 1.0 1.0 183.0 1.0 1.0 1.0 1.0 1.0 0 0 0 0 t 0 47.0 41.0 1.0 122.0 720.0 1.0 1.0 35.0 1.0 1.0 0 0 0 0

MA1548.2_shift3 (PLAGL2)
; positions_6nt_m1 versus MA1548.2 (PLAGL2); m=11/22; ncol2=8; w=-1; offset=-1; strand=D; shift=3; score=0.458662; ---GGGCCCCC---- ; cor=; Ncor= a 0 0 0 39.0 0.0 0.0 0.0 0.0 0.0 0.0 90.0 0 0 0 0 c 0 0 0 39.0 0.0 151.0 799.0 999.0 999.0 925.0 684.0 0 0 0 0 g 0 0 0 813.0 999.0 848.0 200.0 0.0 0.0 0.0 25.0 0 0 0 0 t 0 0 0 107.0 0.0 0.0 0.0 0.0 0.0 74.0 198.0 0 0 0 0

MA0695.2_shift3 (ZBTB7C)
; positions_6nt_m1 versus MA0695.2 (ZBTB7C); m=12/22; ncol2=8; w=-1; offset=-1; strand=D; shift=3; score=0.427002; ---cgACCACC---- ; cor=; Ncor= a 0 0 0 183.0 351.0 1018.0 39.0 0.0 1018.0 18.0 90.0 0 0 0 0 c 0 0 0 1018.0 128.0 225.0 1018.0 1018.0 269.0 1018.0 1018.0 0 0 0 0 g 0 0 0 215.0 1018.0 8.0 0.0 5.0 8.0 7.0 54.0 0 0 0 0 t 0 0 0 110.0 137.0 24.0 0.0 14.0 10.0 17.0 90.0 0 0 0 0

MA1515.2_shift3 (KLF2)
; positions_6nt_m1 versus MA1515.2 (KLF2); m=13/22; ncol2=8; w=-1; offset=-1; strand=D; shift=3; score=0.423117; ---CCmCrCCC---- ; cor=; Ncor= a 0 0 0 741.0 403.0 4622.0 0.0 1702.0 0.0 128.0 68.0 0 0 0 0 c 0 0 0 4622.0 4622.0 2265.0 4622.0 274.0 4622.0 4622.0 4622.0 0 0 0 0 g 0 0 0 495.0 186.0 1060.0 0.0 2920.0 49.0 195.0 105.0 0 0 0 0 t 0 0 0 346.0 312.0 214.0 78.0 167.0 22.0 9.0 444.0 0 0 0 0

MA1117.2_shift3 (RELB)
; positions_6nt_m1 versus MA1117.2 (RELB); m=14/22; ncol2=7; w=-1; offset=-1; strand=D; shift=3; score=0.421854; ---ATTCCCC----- ; cor=; Ncor= a 0 0 0 2833.0 210.0 90.0 144.0 92.0 146.0 79.0 0 0 0 0 0 c 0 0 0 127.0 107.0 103.0 2928.0 3098.0 3013.0 3035.0 0 0 0 0 0 g 0 0 0 157.0 159.0 53.0 40.0 28.0 58.0 107.0 0 0 0 0 0 t 0 0 0 173.0 2814.0 3044.0 178.0 72.0 73.0 69.0 0 0 0 0 0

MA2341.1_shift8 (FEZF2)
; positions_6nt_m1 versus MA2341.1 (FEZF2); m=15/22; ncol2=8; w=0; offset=4; strand=D; shift=8; score=0.413345; --------CCCAGCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 17.0 5.0 4.0 231.0 6.0 8.0 7.0 c 0 0 0 0 0 0 0 0 202.0 206.0 258.0 15.0 8.0 224.0 247.0 g 0 0 0 0 0 0 0 0 10.0 9.0 0.0 14.0 251.0 28.0 2.0 t 0 0 0 0 0 0 0 0 36.0 45.0 3.0 5.0 0.0 5.0 9.0

MA1604.2_shift8 (Ebf2)
; positions_6nt_m1 versus MA1604.2 (Ebf2); m=16/22; ncol2=9; w=0; offset=4; strand=D; shift=8; score=0.412817; --------CCCAAGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 196.0 513.0 435.0 19235.0 19155.0 737.0 1276.0 c 0 0 0 0 0 0 0 0 25497.0 24252.0 25137.0 3744.0 1347.0 239.0 220.0 g 0 0 0 0 0 0 0 0 376.0 259.0 242.0 1427.0 3635.0 25103.0 24386.0 t 0 0 0 0 0 0 0 0 192.0 1237.0 447.0 1855.0 2124.0 182.0 379.0

MA1959.2_rc_shift3 (KLF7_rc)
; positions_6nt_m1 versus MA1959.2_rc (KLF7_rc); m=17/22; ncol2=8; w=-1; offset=-1; strand=R; shift=3; score=0.41211; ---CcMCGCCC---- ; cor=; Ncor= a 0 0 0 1.0 167.0 254.0 1.0 167.0 1.0 1.0 1.0 0 0 0 0 c 0 0 0 997.0 642.0 720.0 997.0 1.0 997.0 997.0 997.0 0 0 0 0 g 0 0 0 1.0 42.0 25.0 1.0 788.0 1.0 1.0 1.0 0 0 0 0 t 0 0 0 1.0 150.0 1.0 1.0 45.0 1.0 1.0 1.0 0 0 0 0

MA1644.2_shift9 (NFYC)
; positions_6nt_m1 versus MA1644.2 (NFYC); m=18/22; ncol2=7; w=0; offset=5; strand=D; shift=9; score=0.410655; ---------CCAATC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 287.0 380.0 12776.0 12317.0 259.0 532.0 c 0 0 0 0 0 0 0 0 0 12507.0 12880.0 325.0 376.0 374.0 11224.0 g 0 0 0 0 0 0 0 0 0 394.0 111.0 103.0 549.0 71.0 1464.0 t 0 0 0 0 0 0 0 0 0 428.0 245.0 412.0 374.0 12912.0 396.0

MA0493.3_rc_shift3 (KLF1_rc)
; positions_6nt_m1 versus MA0493.3_rc (KLF1_rc); m=19/22; ncol2=8; w=-1; offset=-1; strand=R; shift=3; score=0.410368; ---CCmCrCCC---- ; cor=; Ncor= a 0 0 0 1.0 21.0 324.0 1.0 346.0 1.0 1.0 1.0 0 0 0 0 c 0 0 0 998.0 896.0 675.0 998.0 1.0 998.0 998.0 998.0 0 0 0 0 g 0 0 0 1.0 1.0 1.0 1.0 529.0 1.0 1.0 1.0 0 0 0 0 t 0 0 0 1.0 82.0 1.0 1.0 125.0 1.0 1.0 1.0 0 0 0 0

MA1637.2_shift8 (EBF3)
; positions_6nt_m1 versus MA1637.2 (EBF3); m=20/22; ncol2=9; w=0; offset=4; strand=D; shift=8; score=0.408265; --------CCCAAGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 219.0 382.0 336.0 15089.0 15926.0 515.0 881.0 c 0 0 0 0 0 0 0 0 21297.0 20681.0 21017.0 3634.0 1150.0 260.0 230.0 g 0 0 0 0 0 0 0 0 361.0 261.0 324.0 1436.0 3374.0 21188.0 20589.0 t 0 0 0 0 0 0 0 0 185.0 738.0 385.0 1903.0 1612.0 99.0 362.0

MA0741.1_shift0 (KLF16)
; positions_6nt_m1 versus MA0741.1 (KLF16); m=21/22; ncol2=11; w=-4; offset=-4; strand=D; shift=0; score=0.405945; gmCMCgCCCMC---- ; cor=; Ncor= a 666.0 901.0 62.0 1150.0 66.0 497.0 8.0 2.0 16.0 437.0 32.0 0 0 0 0 c 535.0 1612.0 1612.0 461.0 1612.0 173.0 1612.0 1612.0 1612.0 1175.0 1612.0 0 0 0 0 g 1612.0 77.0 6.0 32.0 17.0 1612.0 0.0 8.0 3.0 19.0 23.0 0 0 0 0 t 240.0 116.0 45.0 0.0 19.0 403.0 0.0 0.0 97.0 40.0 370.0 0 0 0 0

MA0747.2_shift1 (SP8)
; positions_6nt_m1 versus MA0747.2 (SP8); m=22/22; ncol2=11; w=-3; offset=-3; strand=D; shift=1; score=0.402757; -mCACgCCCmCy--- ; cor=; Ncor= a 0 54.0 25.0 133.0 7.0 25.0 5.0 2.0 0.0 90.0 13.0 31.0 0 0 0 c 0 113.0 167.0 33.0 167.0 37.0 167.0 167.0 167.0 77.0 167.0 52.0 0 0 0 g 0 0.0 0.0 1.0 1.0 167.0 6.0 3.0 4.0 6.0 21.0 1.0 0 0 0 t 0 4.0 13.0 2.0 5.0 39.0 2.0 0.0 15.0 3.0 39.0 82.0 0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
positions_6nt_m1_shift4 (positions_6nt_m1)				; positions_6nt_m1; m=0 (reference); ncol1=11; shift=4; ncol=15; ----ywCCCCCAayc ; Alignment reference a 0 0 0 0 1278 1381 138 72 156 139 84 4559 2672 1224 1273 c 0 0 0 0 1545 1091 4886 4954 4843 4824 4695 168 1000 1674 1681 g 0 0 0 0 989 1147 63 90 109 172 195 184 823 929 1140 t 0 0 0 0 1364 1557 89 60 68 41 202 265 681 1349 1082
MA0155.1_rc_shift4 (INSM1_rc)				; positions_6nt_m1 versus MA0155.1_rc (INSM1_rc); m=1/22; ncol2=12; w=0; offset=0; strand=R; shift=4; score=0.681642; ----ygmCCCCwkrC ; cor=; Ncor= a 0 0 0 0 2.0 5.0 6.0 0.0 0.0 0.0 0.0 8.0 3.0 13.0 4.0 c 0 0 0 0 12.0 0.0 16.0 24.0 24.0 23.0 24.0 0.0 0.0 3.0 20.0 g 0 0 0 0 0.0 16.0 2.0 0.0 0.0 1.0 0.0 0.0 15.0 8.0 0.0 t 0 0 0 0 10.0 3.0 0.0 0.0 0.0 0.0 0.0 16.0 6.0 0.0 0.0
MA0753.3_shift4 (ZNF740)				; positions_6nt_m1 versus MA0753.3 (ZNF740); m=2/22; ncol2=10; w=0; offset=0; strand=D; shift=4; score=0.664841; ----CCCCCCCCAc- ; cor=; Ncor= a 0 0 0 0 60.0 110.0 18.0 22.0 23.0 10.0 2.0 115.0 1055.0 207.0 0 c 0 0 0 0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 239.0 1055.0 0 g 0 0 0 0 37.0 14.0 4.0 7.0 3.0 7.0 3.0 6.0 68.0 54.0 0 t 0 0 0 0 49.0 1.0 16.0 15.0 11.0 6.0 3.0 4.0 134.0 246.0 0
MA1627.2_shift3 (Wt1)				; positions_6nt_m1 versus MA1627.2 (Wt1); m=3/22; ncol2=10; w=-1; offset=-1; strand=D; shift=3; score=0.599509; ---cCTCCCCCAC-- ; cor=; Ncor= a 0 0 0 839.0 48.0 120.0 21.0 40.0 43.0 850.0 31.0 3294.0 158.0 0 0 c 0 0 0 2948.0 4546.0 69.0 4602.0 4354.0 4252.0 3636.0 4573.0 53.0 3749.0 0 0 g 0 0 0 404.0 58.0 319.0 42.0 75.0 120.0 101.0 46.0 990.0 436.0 0 0 t 0 0 0 500.0 39.0 4183.0 26.0 222.0 276.0 104.0 41.0 354.0 348.0 0 0
MA0737.1_shift3 (GLIS3)				; positions_6nt_m1 versus MA0737.1 (GLIS3); m=4/22; ncol2=14; w=-1; offset=-1; strand=D; shift=3; score=0.575014; ---KACCCCCCACgA ; cor=; Ncor= a 0 0 0 8.0 422.0 0.0 0.0 2.0 0.0 4.0 0.0 886.0 1.0 226.0 529.0 c 0 0 0 41.0 2.0 289.0 280.0 309.0 288.0 200.0 211.0 1.0 204.0 17.0 2.0 g 0 0 0 674.0 13.0 1.0 0.0 0.0 0.0 0.0 0.0 67.0 8.0 648.0 31.0 t 0 0 0 258.0 0.0 1.0 0.0 9.0 1.0 0.0 20.0 9.0 17.0 78.0 87.0
MA0039.5_shift7 (KLF4)				; positions_6nt_m1 versus MA0039.5 (KLF4); m=5/22; ncol2=8; w=0; offset=3; strand=D; shift=7; score= 0.5567; -------CCCCACCC ; cor=; Ncor= a 0 0 0 0 0 0 0 2465.0 2105.0 7021.0 1173.0 45602.0 852.0 1617.0 1202.0 c 0 0 0 0 0 0 0 49209.0 47865.0 45405.0 52875.0 161.0 52366.0 51112.0 51045.0 g 0 0 0 0 0 0 0 1583.0 1214.0 1422.0 793.0 6598.0 1470.0 1870.0 1005.0 t 0 0 0 0 0 0 0 2560.0 4633.0 1969.0 976.0 3456.0 1129.0 1218.0 2565.0
MA0767.2_rc_shift5 (GCM2_rc)				; positions_6nt_m1 versus MA0767.2_rc (GCM2_rc); m=6/22; ncol2=8; w=0; offset=1; strand=R; shift=5; score=0.523425; -----rCCCGCAT-- ; cor=; Ncor= a 0 0 0 0 0 1320.0 0.0 13.0 66.0 127.0 0.0 1320.0 45.0 0 0 c 0 0 0 0 0 91.0 1320.0 1320.0 1320.0 138.0 1320.0 24.0 299.0 0 0 g 0 0 0 0 0 533.0 0.0 0.0 1.0 1320.0 32.0 41.0 77.0 0 0 t 0 0 0 0 0 92.0 1.0 0.0 51.0 84.0 263.0 23.0 1320.0 0 0
MA0735.2_shift2 (GLIS1)				; positions_6nt_m1 versus MA0735.2 (GLIS1); m=7/22; ncol2=15; w=-2; offset=-2; strand=D; shift=2; score=0.519282; --mGACCCCCCACGW ; cor=; Ncor= a 0 0 3236.0 3.0 6314.0 0.0 4.0 0.0 3.0 0.0 6.0 6781.0 0.0 7.0 5759.0 c 0 0 1842.0 44.0 0.0 4807.0 4769.0 4796.0 4817.0 4702.0 4505.0 3.0 4549.0 0.0 4.0 g 0 0 100.0 8617.0 6.0 2.0 2.0 11.0 5.0 0.0 5.0 160.0 0.0 10081.0 32.0 t 0 0 891.0 1016.0 8.0 0.0 3.0 0.0 2.0 7.0 2.0 6.0 0.0 51.0 2024.0
MA1578.2_shift5 (VEZF1)				; positions_6nt_m1 versus MA1578.2 (VEZF1); m=8/22; ncol2=6; w=0; offset=1; strand=D; shift=5; score=0.512218; -----CCCCCC---- ; cor=; Ncor= a 0 0 0 0 0 71.0 1.0 4.0 2.0 6.0 10.0 0 0 0 0 c 0 0 0 0 0 790.0 997.0 995.0 997.0 989.0 977.0 0 0 0 0 g 0 0 0 0 0 137.0 0.0 0.0 0.0 0.0 3.0 0 0 0 0 t 0 0 0 0 0 0.0 0.0 0.0 0.0 4.0 8.0 0 0 0 0
MA1987.2_rc_shift4 (ZNF701_rc)				; positions_6nt_m1 versus MA1987.2_rc (ZNF701_rc); m=9/22; ncol2=17; w=0; offset=0; strand=R; shift=4; score=0.490143; ----TyCCCCCyttr ; cor=; Ncor= a 0 0 0 0 110.0 27.0 15.0 62.0 15.0 3.0 27.0 86.0 217.0 205.0 265.0 c 0 0 0 0 146.0 455.0 872.0 753.0 920.0 979.0 896.0 384.0 217.0 193.0 146.0 g 0 0 0 0 51.0 86.0 3.0 3.0 51.0 3.0 3.0 98.0 122.0 158.0 503.0 t 0 0 0 0 693.0 432.0 110.0 182.0 15.0 15.0 74.0 432.0 443.0 443.0 86.0
MA1630.3_rc_shift1 (ZNF281_rc)				; positions_6nt_m1 versus MA1630.3_rc (ZNF281_rc); m=10/22; ncol2=10; w=-3; offset=-3; strand=R; shift=1; score=0.467465; -CCCCTCCCCC---- ; cor=; Ncor= a 0 7.0 18.0 1.0 105.0 96.0 1.0 1.0 1.0 1.0 1.0 0 0 0 0 c 0 920.0 940.0 998.0 772.0 1.0 998.0 998.0 963.0 998.0 998.0 0 0 0 0 g 0 27.0 1.0 1.0 1.0 183.0 1.0 1.0 1.0 1.0 1.0 0 0 0 0 t 0 47.0 41.0 1.0 122.0 720.0 1.0 1.0 35.0 1.0 1.0 0 0 0 0
MA1548.2_shift3 (PLAGL2)				; positions_6nt_m1 versus MA1548.2 (PLAGL2); m=11/22; ncol2=8; w=-1; offset=-1; strand=D; shift=3; score=0.458662; ---GGGCCCCC---- ; cor=; Ncor= a 0 0 0 39.0 0.0 0.0 0.0 0.0 0.0 0.0 90.0 0 0 0 0 c 0 0 0 39.0 0.0 151.0 799.0 999.0 999.0 925.0 684.0 0 0 0 0 g 0 0 0 813.0 999.0 848.0 200.0 0.0 0.0 0.0 25.0 0 0 0 0 t 0 0 0 107.0 0.0 0.0 0.0 0.0 0.0 74.0 198.0 0 0 0 0
MA0695.2_shift3 (ZBTB7C)				; positions_6nt_m1 versus MA0695.2 (ZBTB7C); m=12/22; ncol2=8; w=-1; offset=-1; strand=D; shift=3; score=0.427002; ---cgACCACC---- ; cor=; Ncor= a 0 0 0 183.0 351.0 1018.0 39.0 0.0 1018.0 18.0 90.0 0 0 0 0 c 0 0 0 1018.0 128.0 225.0 1018.0 1018.0 269.0 1018.0 1018.0 0 0 0 0 g 0 0 0 215.0 1018.0 8.0 0.0 5.0 8.0 7.0 54.0 0 0 0 0 t 0 0 0 110.0 137.0 24.0 0.0 14.0 10.0 17.0 90.0 0 0 0 0
MA1515.2_shift3 (KLF2)				; positions_6nt_m1 versus MA1515.2 (KLF2); m=13/22; ncol2=8; w=-1; offset=-1; strand=D; shift=3; score=0.423117; ---CCmCrCCC---- ; cor=; Ncor= a 0 0 0 741.0 403.0 4622.0 0.0 1702.0 0.0 128.0 68.0 0 0 0 0 c 0 0 0 4622.0 4622.0 2265.0 4622.0 274.0 4622.0 4622.0 4622.0 0 0 0 0 g 0 0 0 495.0 186.0 1060.0 0.0 2920.0 49.0 195.0 105.0 0 0 0 0 t 0 0 0 346.0 312.0 214.0 78.0 167.0 22.0 9.0 444.0 0 0 0 0
MA1117.2_shift3 (RELB)				; positions_6nt_m1 versus MA1117.2 (RELB); m=14/22; ncol2=7; w=-1; offset=-1; strand=D; shift=3; score=0.421854; ---ATTCCCC----- ; cor=; Ncor= a 0 0 0 2833.0 210.0 90.0 144.0 92.0 146.0 79.0 0 0 0 0 0 c 0 0 0 127.0 107.0 103.0 2928.0 3098.0 3013.0 3035.0 0 0 0 0 0 g 0 0 0 157.0 159.0 53.0 40.0 28.0 58.0 107.0 0 0 0 0 0 t 0 0 0 173.0 2814.0 3044.0 178.0 72.0 73.0 69.0 0 0 0 0 0
MA2341.1_shift8 (FEZF2)				; positions_6nt_m1 versus MA2341.1 (FEZF2); m=15/22; ncol2=8; w=0; offset=4; strand=D; shift=8; score=0.413345; --------CCCAGCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 17.0 5.0 4.0 231.0 6.0 8.0 7.0 c 0 0 0 0 0 0 0 0 202.0 206.0 258.0 15.0 8.0 224.0 247.0 g 0 0 0 0 0 0 0 0 10.0 9.0 0.0 14.0 251.0 28.0 2.0 t 0 0 0 0 0 0 0 0 36.0 45.0 3.0 5.0 0.0 5.0 9.0
MA1604.2_shift8 (Ebf2)				; positions_6nt_m1 versus MA1604.2 (Ebf2); m=16/22; ncol2=9; w=0; offset=4; strand=D; shift=8; score=0.412817; --------CCCAAGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 196.0 513.0 435.0 19235.0 19155.0 737.0 1276.0 c 0 0 0 0 0 0 0 0 25497.0 24252.0 25137.0 3744.0 1347.0 239.0 220.0 g 0 0 0 0 0 0 0 0 376.0 259.0 242.0 1427.0 3635.0 25103.0 24386.0 t 0 0 0 0 0 0 0 0 192.0 1237.0 447.0 1855.0 2124.0 182.0 379.0
MA1959.2_rc_shift3 (KLF7_rc)				; positions_6nt_m1 versus MA1959.2_rc (KLF7_rc); m=17/22; ncol2=8; w=-1; offset=-1; strand=R; shift=3; score=0.41211; ---CcMCGCCC---- ; cor=; Ncor= a 0 0 0 1.0 167.0 254.0 1.0 167.0 1.0 1.0 1.0 0 0 0 0 c 0 0 0 997.0 642.0 720.0 997.0 1.0 997.0 997.0 997.0 0 0 0 0 g 0 0 0 1.0 42.0 25.0 1.0 788.0 1.0 1.0 1.0 0 0 0 0 t 0 0 0 1.0 150.0 1.0 1.0 45.0 1.0 1.0 1.0 0 0 0 0
MA1644.2_shift9 (NFYC)				; positions_6nt_m1 versus MA1644.2 (NFYC); m=18/22; ncol2=7; w=0; offset=5; strand=D; shift=9; score=0.410655; ---------CCAATC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 287.0 380.0 12776.0 12317.0 259.0 532.0 c 0 0 0 0 0 0 0 0 0 12507.0 12880.0 325.0 376.0 374.0 11224.0 g 0 0 0 0 0 0 0 0 0 394.0 111.0 103.0 549.0 71.0 1464.0 t 0 0 0 0 0 0 0 0 0 428.0 245.0 412.0 374.0 12912.0 396.0
MA0493.3_rc_shift3 (KLF1_rc)				; positions_6nt_m1 versus MA0493.3_rc (KLF1_rc); m=19/22; ncol2=8; w=-1; offset=-1; strand=R; shift=3; score=0.410368; ---CCmCrCCC---- ; cor=; Ncor= a 0 0 0 1.0 21.0 324.0 1.0 346.0 1.0 1.0 1.0 0 0 0 0 c 0 0 0 998.0 896.0 675.0 998.0 1.0 998.0 998.0 998.0 0 0 0 0 g 0 0 0 1.0 1.0 1.0 1.0 529.0 1.0 1.0 1.0 0 0 0 0 t 0 0 0 1.0 82.0 1.0 1.0 125.0 1.0 1.0 1.0 0 0 0 0
MA1637.2_shift8 (EBF3)				; positions_6nt_m1 versus MA1637.2 (EBF3); m=20/22; ncol2=9; w=0; offset=4; strand=D; shift=8; score=0.408265; --------CCCAAGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 219.0 382.0 336.0 15089.0 15926.0 515.0 881.0 c 0 0 0 0 0 0 0 0 21297.0 20681.0 21017.0 3634.0 1150.0 260.0 230.0 g 0 0 0 0 0 0 0 0 361.0 261.0 324.0 1436.0 3374.0 21188.0 20589.0 t 0 0 0 0 0 0 0 0 185.0 738.0 385.0 1903.0 1612.0 99.0 362.0
MA0741.1_shift0 (KLF16)				; positions_6nt_m1 versus MA0741.1 (KLF16); m=21/22; ncol2=11; w=-4; offset=-4; strand=D; shift=0; score=0.405945; gmCMCgCCCMC---- ; cor=; Ncor= a 666.0 901.0 62.0 1150.0 66.0 497.0 8.0 2.0 16.0 437.0 32.0 0 0 0 0 c 535.0 1612.0 1612.0 461.0 1612.0 173.0 1612.0 1612.0 1612.0 1175.0 1612.0 0 0 0 0 g 1612.0 77.0 6.0 32.0 17.0 1612.0 0.0 8.0 3.0 19.0 23.0 0 0 0 0 t 240.0 116.0 45.0 0.0 19.0 403.0 0.0 0.0 97.0 40.0 370.0 0 0 0 0
MA0747.2_shift1 (SP8)				; positions_6nt_m1 versus MA0747.2 (SP8); m=22/22; ncol2=11; w=-3; offset=-3; strand=D; shift=1; score=0.402757; -mCACgCCCmCy--- ; cor=; Ncor= a 0 54.0 25.0 133.0 7.0 25.0 5.0 2.0 0.0 90.0 13.0 31.0 0 0 0 c 0 113.0 167.0 33.0 167.0 37.0 167.0 167.0 167.0 77.0 167.0 52.0 0 0 0 g 0 0.0 0.0 1.0 1.0 167.0 6.0 3.0 4.0 6.0 21.0 1.0 0 0 0 t 0 4.0 13.0 2.0 5.0 39.0 2.0 0.0 15.0 3.0 39.0 82.0 0 0 0