One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2025/11/26/peak-motifs.2025-11-26.205219_2025-11-26.205219_vuDZlG/results/discovered_motifs/oligos_6nt_mkv4_m4/peak-motifs_oligos_6nt_mkv4_m4.tf -format2 tf -file2 $RSAT/public_html/motif_databases/FlyFactorSurvey/PWM_FlyFactorSurvey_2016.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2025/11/26/peak-motifs.2025-11-26.205219_2025-11-26.205219_vuDZlG/results/discovered_motifs/oligos_6nt_mkv4_m4/peak-motifs_oligos_6nt_mkv4_m4_vs_db_FlyFactorSurvey

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv4_m4_shift4 ; 32 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv4_m4_shift4 (oligos_6nt_mkv4_m4)
; oligos_6nt_mkv4_m4; m=0 (reference); ncol1=11; shift=4; ncol=15; ----ammAACACCmc ; Alignment reference a 0 0 0 0 603 434 886 1461 1470 34 1378 0 0 542 381 c 0 0 0 0 379 473 435 6 49 1453 126 1550 1575 416 540 g 0 0 0 0 284 341 132 31 32 32 22 11 3 328 294 t 0 0 0 0 322 340 135 90 37 69 62 27 10 302 373

lola-PQ_SANGER_5_FBgn0005630_shift4 (lola-PQ_SANGER_5_FBgn0005630)
; oligos_6nt_mkv4_m4 versus lola-PQ_SANGER_5_FBgn0005630; m=1/31; ncol2=9; w=0; offset=0; strand=D; shift=4; score=0.70071; ----AvrAWCAmC-- ; cor=; Ncor= a 0 0 0 0 8 3 6 10 8 0 11 6 0 0 0 c 0 0 0 0 2 3 1 0 0 11 0 5 9 0 0 g 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 t 0 0 0 0 1 1 0 1 3 0 0 0 2 0 0

lola-PQ_SOLEXA_FBgn0005630_rc_shift2 (lola-PQ_SOLEXA_FBgn0005630_rc)
; oligos_6nt_mkv4_m4 versus lola-PQ_SOLEXA_FBgn0005630_rc; m=2/31; ncol2=15; w=-2; offset=-2; strand=R; shift=2; score=0.597186; --mmamrAWCAmCsc ; cor=; Ncor= a 0 0 158 198 244 157 162 446 376 0 501 322 0 111 110 c 0 0 154 160 111 222 44 0 0 504 2 180 441 158 268 g 0 0 97 86 115 81 275 38 0 0 0 0 8 181 69 t 0 0 93 57 32 41 23 18 126 0 0 0 54 52 55

sage_da_SANGER_5_FBgn0000413_shift5 (sage_da_SANGER_5_FBgn0000413)
; oligos_6nt_mkv4_m4 versus sage_da_SANGER_5_FBgn0000413; m=3/31; ncol2=11; w=0; offset=1; strand=D; shift=5; score=0.593552; -----rAAMCAsCTG ; cor=; Ncor= a 0 0 0 0 0 12 17 21 16 0 23 0 5 1 0 c 0 0 0 0 0 0 3 2 6 23 0 10 18 1 0 g 0 0 0 0 0 6 3 0 1 0 0 9 0 0 23 t 0 0 0 0 0 5 0 0 0 0 0 4 0 21 0

sage_da_SANGER_5_FBgn0037672_shift5 (sage_da_SANGER_5_FBgn0037672)
; oligos_6nt_mkv4_m4 versus sage_da_SANGER_5_FBgn0037672; m=4/31; ncol2=11; w=0; offset=1; strand=D; shift=5; score=0.593552; -----rAAMCAsCTG ; cor=; Ncor= a 0 0 0 0 0 12 17 21 16 0 23 0 5 1 0 c 0 0 0 0 0 0 3 2 6 23 0 10 18 1 0 g 0 0 0 0 0 6 3 0 1 0 0 9 0 0 23 t 0 0 0 0 0 5 0 0 0 0 0 4 0 21 0

Side_SANGER_5_FBgn0032741_shift5 (Side_SANGER_5_FBgn0032741)
; oligos_6nt_mkv4_m4 versus Side_SANGER_5_FBgn0032741; m=5/31; ncol2=11; w=0; offset=1; strand=D; shift=5; score=0.593552; -----rAAMCAsCTG ; cor=; Ncor= a 0 0 0 0 0 12 17 21 16 0 23 0 5 1 0 c 0 0 0 0 0 0 3 2 6 23 0 10 18 1 0 g 0 0 0 0 0 6 3 0 1 0 0 9 0 0 23 t 0 0 0 0 0 5 0 0 0 0 0 4 0 21 0

lola-PF_SANGER_5_FBgn0005630_shift6 (lola-PF_SANGER_5_FBgn0005630)
; oligos_6nt_mkv4_m4 versus lola-PF_SANGER_5_FBgn0005630; m=6/31; ncol2=10; w=0; offset=2; strand=D; shift=6; score=0.572099; ------mAACTCCay ; cor=; Ncor= a 0 0 0 0 0 0 5 11 12 0 0 0 0 8 0 c 0 0 0 0 0 0 5 0 0 12 0 11 12 1 6 g 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 2 1 0 0 12 1 0 2 6

CG5953_SANGER_5_FBgn0032587_shift4 (CG5953_SANGER_5_FBgn0032587)
; oligos_6nt_mkv4_m4 versus CG5953_SANGER_5_FBgn0032587; m=7/31; ncol2=8; w=0; offset=0; strand=D; shift=4; score=0.570579; ----aCAAACAy--- ; cor=; Ncor= a 0 0 0 0 10 0 16 16 16 0 16 1 0 0 0 c 0 0 0 0 3 16 0 0 0 16 0 5 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 3 0 0 0 0 0 0 10 0 0 0

lola-PF_SOLEXA_FBgn0005630_rc_shift4 (lola-PF_SOLEXA_FBgn0005630_rc)
; oligos_6nt_mkv4_m4 versus lola-PF_SOLEXA_FBgn0005630_rc; m=8/31; ncol2=15; w=0; offset=0; strand=R; shift=4; score=0.560189; ----cmmAACTCCAy ; cor=; Ncor= a 0 0 0 0 651 875 871 2434 2609 14 1 11 26 1831 393 c 0 0 0 0 962 1008 1111 10 4 2605 10 2506 2581 110 1367 g 0 0 0 0 367 547 123 151 5 0 2 0 1 476 145 t 0 0 0 0 638 189 513 23 0 0 2603 101 10 201 713

bin_SANGER_5_FBgn0045759_shift4 (bin_SANGER_5_FBgn0045759)
; oligos_6nt_mkv4_m4 versus bin_SANGER_5_FBgn0045759; m=9/31; ncol2=7; w=0; offset=0; strand=D; shift=4; score=0.540854; ----rTAAACA---- ; cor=; Ncor= a 0 0 0 0 9 0 20 20 20 0 19 0 0 0 0 c 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 g 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 1 20 0 0 0 0 1 0 0 0 0

Mirr_Cell_FBgn0014343_shift3 (Mirr_Cell_FBgn0014343)
; oligos_6nt_mkv4_m4 versus Mirr_Cell_FBgn0014343; m=10/31; ncol2=8; w=-1; offset=-1; strand=D; shift=3; score=0.535628; ---waawAACA---- ; cor=; Ncor= a 0 0 0 18 18 22 20 29 41 0 41 0 0 0 0 c 0 0 0 6 4 7 1 0 0 41 0 0 0 0 0 g 0 0 0 6 10 6 1 2 0 0 0 0 0 0 0 t 0 0 0 11 9 6 19 10 0 0 0 0 0 0 0

fd64A_SANGER_5_FBgn0004895_shift3 (fd64A_SANGER_5_FBgn0004895)
; oligos_6nt_mkv4_m4 versus fd64A_SANGER_5_FBgn0004895; m=11/31; ncol2=8; w=-1; offset=-1; strand=D; shift=3; score=0.533538; ---tvtAAACA---- ; cor=; Ncor= a 0 0 0 3 7 4 20 19 20 0 20 0 0 0 0 c 0 0 0 0 5 3 0 1 0 17 0 0 0 0 0 g 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 t 0 0 0 13 2 13 0 0 0 3 0 0 0 0 0

slp2_SANGER_5_FBgn0004567_shift4 (slp2_SANGER_5_FBgn0004567)
; oligos_6nt_mkv4_m4 versus slp2_SANGER_5_FBgn0004567; m=12/31; ncol2=8; w=0; offset=0; strand=D; shift=4; score=0.518635; ----rTAAACAa--- ; cor=; Ncor= a 0 0 0 0 6 0 18 18 18 0 18 11 0 0 0 c 0 0 0 0 0 1 0 0 0 18 0 3 0 0 0 g 0 0 0 0 12 0 0 0 0 0 0 3 0 0 0 t 0 0 0 0 0 17 0 0 0 0 0 1 0 0 0

HLH4C_da_SANGER_5_FBgn0000413_shift4 (HLH4C_da_SANGER_5_FBgn0000413)
; oligos_6nt_mkv4_m4 versus HLH4C_da_SANGER_5_FBgn0000413; m=13/31; ncol2=15; w=0; offset=0; strand=D; shift=4; score=0.51672; ----mammvCACCTG ; cor=; Ncor= a 0 0 0 0 9 12 11 11 10 0 23 0 1 0 0 c 0 0 0 0 9 3 6 6 6 23 0 21 22 0 1 g 0 0 0 0 5 5 2 1 7 0 0 1 0 0 22 t 0 0 0 0 0 3 4 5 0 0 0 1 0 23 0

HLH4C_da_SANGER_5_FBgn0011277_shift4 (HLH4C_da_SANGER_5_FBgn0011277)
; oligos_6nt_mkv4_m4 versus HLH4C_da_SANGER_5_FBgn0011277; m=14/31; ncol2=15; w=0; offset=0; strand=D; shift=4; score=0.51672; ----mammvCACCTG ; cor=; Ncor= a 0 0 0 0 9 12 11 11 10 0 23 0 1 0 0 c 0 0 0 0 9 3 6 6 6 23 0 21 22 0 1 g 0 0 0 0 5 5 2 1 7 0 0 1 0 0 22 t 0 0 0 0 0 3 4 5 0 0 0 1 0 23 0

Ara_Cell_FBgn0015904_shift3 (Ara_Cell_FBgn0015904)
; oligos_6nt_mkv4_m4 versus Ara_Cell_FBgn0015904; m=15/31; ncol2=8; w=-1; offset=-1; strand=D; shift=3; score=0.511889; ---raAwwACA---- ; cor=; Ncor= a 0 0 0 12 16 24 14 23 34 0 34 0 0 0 0 c 0 0 0 5 7 1 0 0 0 34 0 0 0 0 0 g 0 0 0 10 6 1 5 0 0 0 0 0 0 0 0 t 0 0 0 7 5 8 15 11 0 0 0 0 0 0 0

Caup_Cell_FBgn0015919_shift3 (Caup_Cell_FBgn0015919)
; oligos_6nt_mkv4_m4 versus Caup_Cell_FBgn0015919; m=16/31; ncol2=8; w=-1; offset=-1; strand=D; shift=3; score=0.502113; ---cwwtAACA---- ; cor=; Ncor= a 0 0 0 4 9 8 4 14 19 0 19 0 0 0 0 c 0 0 0 9 0 0 1 0 0 19 0 0 0 0 0 g 0 0 0 2 3 4 2 2 0 0 0 0 0 0 0 t 0 0 0 4 7 7 12 3 0 0 0 0 0 0 0

Mirr_SOLEXA_FBgn0014343_shift5 (Mirr_SOLEXA_FBgn0014343)
; oligos_6nt_mkv4_m4 versus Mirr_SOLEXA_FBgn0014343; m=17/31; ncol2=6; w=0; offset=1; strand=D; shift=5; score=0.483969; -----wwwACA---- ; cor=; Ncor= a 0 0 0 0 0 550 410 782 1415 0 1415 0 0 0 0 c 0 0 0 0 0 158 93 0 0 1415 0 0 0 0 0 g 0 0 0 0 0 327 282 204 0 0 0 0 0 0 0 t 0 0 0 0 0 380 630 429 0 0 0 0 0 0 0

Ara_SOLEXA_FBgn0015904_shift5 (Ara_SOLEXA_FBgn0015904)
; oligos_6nt_mkv4_m4 versus Ara_SOLEXA_FBgn0015904; m=18/31; ncol2=6; w=0; offset=1; strand=D; shift=5; score=0.479754; -----awwACA---- ; cor=; Ncor= a 0 0 0 0 0 155 97 193 313 0 313 0 0 0 0 c 0 0 0 0 0 36 0 0 0 313 0 0 0 0 0 g 0 0 0 0 0 44 45 38 0 0 0 0 0 0 0 t 0 0 0 0 0 78 171 82 0 0 0 0 0 0 0

foxo_SANGER_10_FBgn0038197_rc_shift2 (foxo_SANGER_10_FBgn0038197_rc)
; oligos_6nt_mkv4_m4 versus foxo_SANGER_10_FBgn0038197_rc; m=19/31; ncol2=9; w=-2; offset=-2; strand=R; shift=2; score=0.477287; --ycrwAAACA---- ; cor=; Ncor= a 0 0 0 3 8 8 16 16 20 0 20 0 0 0 0 c 0 0 6 12 0 0 1 4 0 18 0 0 0 0 0 g 0 0 3 3 11 0 0 0 0 0 0 0 0 0 0 t 0 0 11 2 1 12 3 0 0 2 0 0 0 0 0

slp1_NAR_FBgn0003430_rc_shift1 (slp1_NAR_FBgn0003430_rc)
; oligos_6nt_mkv4_m4 versus slp1_NAR_FBgn0003430_rc; m=20/31; ncol2=11; w=-3; offset=-3; strand=R; shift=1; score=0.468501; -wryrtAAACAm--- ; cor=; Ncor= a 0 19 21 1 11 10 39 40 41 0 41 16 0 0 0 c 0 4 3 15 7 4 2 1 0 38 0 14 0 0 0 g 0 3 13 8 22 0 0 0 0 0 0 3 0 0 0 t 0 15 4 17 1 27 0 0 0 3 0 8 0 0 0

CG16899_SANGER_5_FBgn0037735_shift3 (CG16899_SANGER_5_FBgn0037735)
; oligos_6nt_mkv4_m4 versus CG16899_SANGER_5_FBgn0037735; m=21/31; ncol2=9; w=-1; offset=-1; strand=D; shift=3; score=0.468017; ---vrTAAACAA--- ; cor=; Ncor= a 0 0 0 6 10 1 21 20 21 0 21 15 0 0 0 c 0 0 0 5 2 2 0 0 0 18 0 2 0 0 0 g 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 18 0 1 0 3 0 4 0 0 0

Caup_SOLEXA_FBgn0015919_shift5 (Caup_SOLEXA_FBgn0015919)
; oligos_6nt_mkv4_m4 versus Caup_SOLEXA_FBgn0015919; m=22/31; ncol2=6; w=0; offset=1; strand=D; shift=5; score=0.464906; -----wtwACA---- ; cor=; Ncor= a 0 0 0 0 0 999 577 1415 2904 2 2904 0 0 0 0 c 0 0 0 0 0 460 201 0 0 2902 0 0 0 0 0 g 0 0 0 0 0 626 639 511 0 0 0 0 0 0 0 t 0 0 0 0 0 819 1487 978 0 0 0 0 0 0 0

CG11617_SOLEXA_FBgn0031232_shift3 (CG11617_SOLEXA_FBgn0031232)
; oligos_6nt_mkv4_m4 versus CG11617_SOLEXA_FBgn0031232; m=23/31; ncol2=8; w=-1; offset=-1; strand=D; shift=3; score=0.454991; ---wtwTwACA---- ; cor=; Ncor= a 0 0 0 370 281 352 133 483 1159 7 1148 0 0 0 0 c 0 0 0 201 262 176 167 0 0 1152 2 0 0 0 0 g 0 0 0 211 257 176 20 283 0 0 9 0 0 0 0 t 0 0 0 377 359 455 839 393 0 0 0 0 0 0 0

ac_da_SANGER_5_FBgn0000022_shift8 (ac_da_SANGER_5_FBgn0000022)
; oligos_6nt_mkv4_m4 versus ac_da_SANGER_5_FBgn0000022; m=24/31; ncol2=8; w=0; offset=4; strand=D; shift=8; score=0.432417; --------rCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 10 0 19 0 0 0 0 c 0 0 0 0 0 0 0 0 1 19 0 18 19 0 0 g 0 0 0 0 0 0 0 0 7 0 0 1 0 0 19 t 0 0 0 0 0 0 0 0 1 0 0 0 0 19 0

ac_da_SANGER_5_FBgn0000413_shift8 (ac_da_SANGER_5_FBgn0000413)
; oligos_6nt_mkv4_m4 versus ac_da_SANGER_5_FBgn0000413; m=25/31; ncol2=8; w=0; offset=4; strand=D; shift=8; score=0.432417; --------rCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 10 0 19 0 0 0 0 c 0 0 0 0 0 0 0 0 1 19 0 18 19 0 0 g 0 0 0 0 0 0 0 0 7 0 0 1 0 0 19 t 0 0 0 0 0 0 0 0 1 0 0 0 0 19 0

sc_da_SANGER_10_FBgn0000413_shift8 (sc_da_SANGER_10_FBgn0000413)
; oligos_6nt_mkv4_m4 versus sc_da_SANGER_10_FBgn0000413; m=26/31; ncol2=8; w=0; offset=4; strand=D; shift=8; score= 0.4236; --------rCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11 0 24 0 0 0 0 c 0 0 0 0 0 0 0 0 5 23 0 21 24 0 0 g 0 0 0 0 0 0 0 0 7 0 0 1 0 0 24 t 0 0 0 0 0 0 0 0 0 0 0 2 0 24 0

sc_da_SANGER_10_FBgn0004170_shift8 (sc_da_SANGER_10_FBgn0004170)
; oligos_6nt_mkv4_m4 versus sc_da_SANGER_10_FBgn0004170; m=27/31; ncol2=8; w=0; offset=4; strand=D; shift=8; score= 0.4236; --------rCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11 0 24 0 0 0 0 c 0 0 0 0 0 0 0 0 5 23 0 21 24 0 0 g 0 0 0 0 0 0 0 0 7 0 0 1 0 0 24 t 0 0 0 0 0 0 0 0 0 0 0 2 0 24 0

fkh_NAR_FBgn0000659_rc_shift0 (fkh_NAR_FBgn0000659_rc)
; oligos_6nt_mkv4_m4 versus fkh_NAR_FBgn0000659_rc; m=28/31; ncol2=11; w=-4; offset=-4; strand=R; shift=0; score=0.421441; tTrrryAAACA---- ; cor=; Ncor= a 4 3 14 11 8 0 26 27 27 0 24 0 0 0 0 c 4 1 2 3 2 14 1 0 0 22 0 0 0 0 0 g 4 0 11 7 13 0 0 0 0 0 0 0 0 0 0 t 15 23 0 6 4 13 0 0 0 5 3 0 0 0 0

HLH54F_da_SANGER_5_FBgn0000413_shift7 (HLH54F_da_SANGER_5_FBgn0000413)
; oligos_6nt_mkv4_m4 versus HLH54F_da_SANGER_5_FBgn0000413; m=29/31; ncol2=11; w=0; offset=3; strand=D; shift=7; score=0.416631; -------mmCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 0 12 12 0 24 0 0 0 0 c 0 0 0 0 0 0 0 10 10 23 0 24 23 1 0 g 0 0 0 0 0 0 0 1 2 0 0 0 0 2 24 t 0 0 0 0 0 0 0 1 0 1 0 0 1 21 0

HLH54F_da_SANGER_5_FBgn0022740_shift7 (HLH54F_da_SANGER_5_FBgn0022740)
; oligos_6nt_mkv4_m4 versus HLH54F_da_SANGER_5_FBgn0022740; m=30/31; ncol2=11; w=0; offset=3; strand=D; shift=7; score=0.416631; -------mmCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 0 12 12 0 24 0 0 0 0 c 0 0 0 0 0 0 0 10 10 23 0 24 23 1 0 g 0 0 0 0 0 0 0 1 2 0 0 0 0 2 24 t 0 0 0 0 0 0 0 1 0 1 0 0 1 21 0

CG31782-F9-11_SOLEXA_FBgn0051782_rc_shift7 (CG31782-F9-11_SOLEXA_FBgn0051782_rc)
; oligos_6nt_mkv4_m4 versus CG31782-F9-11_SOLEXA_FBgn0051782_rc; m=31/31; ncol2=11; w=0; offset=3; strand=R; shift=7; score=0.400872; -------ctCACCac ; cor=; Ncor= a 0 0 0 0 0 0 0 269 617 42 2023 0 0 1676 407 c 0 0 0 0 0 0 0 1324 287 1979 143 2554 2552 582 1464 g 0 0 0 0 0 0 0 584 195 25 0 0 0 27 305 t 0 0 0 0 0 0 0 375 1453 506 386 0 1 269 377

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv4_m4_shift4 (oligos_6nt_mkv4_m4)				; oligos_6nt_mkv4_m4; m=0 (reference); ncol1=11; shift=4; ncol=15; ----ammAACACCmc ; Alignment reference a 0 0 0 0 603 434 886 1461 1470 34 1378 0 0 542 381 c 0 0 0 0 379 473 435 6 49 1453 126 1550 1575 416 540 g 0 0 0 0 284 341 132 31 32 32 22 11 3 328 294 t 0 0 0 0 322 340 135 90 37 69 62 27 10 302 373
lola-PQ_SANGER_5_FBgn0005630_shift4 (lola-PQ_SANGER_5_FBgn0005630)				; oligos_6nt_mkv4_m4 versus lola-PQ_SANGER_5_FBgn0005630; m=1/31; ncol2=9; w=0; offset=0; strand=D; shift=4; score=0.70071; ----AvrAWCAmC-- ; cor=; Ncor= a 0 0 0 0 8 3 6 10 8 0 11 6 0 0 0 c 0 0 0 0 2 3 1 0 0 11 0 5 9 0 0 g 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 t 0 0 0 0 1 1 0 1 3 0 0 0 2 0 0
lola-PQ_SOLEXA_FBgn0005630_rc_shift2 (lola-PQ_SOLEXA_FBgn0005630_rc)				; oligos_6nt_mkv4_m4 versus lola-PQ_SOLEXA_FBgn0005630_rc; m=2/31; ncol2=15; w=-2; offset=-2; strand=R; shift=2; score=0.597186; --mmamrAWCAmCsc ; cor=; Ncor= a 0 0 158 198 244 157 162 446 376 0 501 322 0 111 110 c 0 0 154 160 111 222 44 0 0 504 2 180 441 158 268 g 0 0 97 86 115 81 275 38 0 0 0 0 8 181 69 t 0 0 93 57 32 41 23 18 126 0 0 0 54 52 55
sage_da_SANGER_5_FBgn0000413_shift5 (sage_da_SANGER_5_FBgn0000413)				; oligos_6nt_mkv4_m4 versus sage_da_SANGER_5_FBgn0000413; m=3/31; ncol2=11; w=0; offset=1; strand=D; shift=5; score=0.593552; -----rAAMCAsCTG ; cor=; Ncor= a 0 0 0 0 0 12 17 21 16 0 23 0 5 1 0 c 0 0 0 0 0 0 3 2 6 23 0 10 18 1 0 g 0 0 0 0 0 6 3 0 1 0 0 9 0 0 23 t 0 0 0 0 0 5 0 0 0 0 0 4 0 21 0
sage_da_SANGER_5_FBgn0037672_shift5 (sage_da_SANGER_5_FBgn0037672)				; oligos_6nt_mkv4_m4 versus sage_da_SANGER_5_FBgn0037672; m=4/31; ncol2=11; w=0; offset=1; strand=D; shift=5; score=0.593552; -----rAAMCAsCTG ; cor=; Ncor= a 0 0 0 0 0 12 17 21 16 0 23 0 5 1 0 c 0 0 0 0 0 0 3 2 6 23 0 10 18 1 0 g 0 0 0 0 0 6 3 0 1 0 0 9 0 0 23 t 0 0 0 0 0 5 0 0 0 0 0 4 0 21 0
Side_SANGER_5_FBgn0032741_shift5 (Side_SANGER_5_FBgn0032741)				; oligos_6nt_mkv4_m4 versus Side_SANGER_5_FBgn0032741; m=5/31; ncol2=11; w=0; offset=1; strand=D; shift=5; score=0.593552; -----rAAMCAsCTG ; cor=; Ncor= a 0 0 0 0 0 12 17 21 16 0 23 0 5 1 0 c 0 0 0 0 0 0 3 2 6 23 0 10 18 1 0 g 0 0 0 0 0 6 3 0 1 0 0 9 0 0 23 t 0 0 0 0 0 5 0 0 0 0 0 4 0 21 0
lola-PF_SANGER_5_FBgn0005630_shift6 (lola-PF_SANGER_5_FBgn0005630)				; oligos_6nt_mkv4_m4 versus lola-PF_SANGER_5_FBgn0005630; m=6/31; ncol2=10; w=0; offset=2; strand=D; shift=6; score=0.572099; ------mAACTCCay ; cor=; Ncor= a 0 0 0 0 0 0 5 11 12 0 0 0 0 8 0 c 0 0 0 0 0 0 5 0 0 12 0 11 12 1 6 g 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 2 1 0 0 12 1 0 2 6
CG5953_SANGER_5_FBgn0032587_shift4 (CG5953_SANGER_5_FBgn0032587)				; oligos_6nt_mkv4_m4 versus CG5953_SANGER_5_FBgn0032587; m=7/31; ncol2=8; w=0; offset=0; strand=D; shift=4; score=0.570579; ----aCAAACAy--- ; cor=; Ncor= a 0 0 0 0 10 0 16 16 16 0 16 1 0 0 0 c 0 0 0 0 3 16 0 0 0 16 0 5 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 3 0 0 0 0 0 0 10 0 0 0
lola-PF_SOLEXA_FBgn0005630_rc_shift4 (lola-PF_SOLEXA_FBgn0005630_rc)				; oligos_6nt_mkv4_m4 versus lola-PF_SOLEXA_FBgn0005630_rc; m=8/31; ncol2=15; w=0; offset=0; strand=R; shift=4; score=0.560189; ----cmmAACTCCAy ; cor=; Ncor= a 0 0 0 0 651 875 871 2434 2609 14 1 11 26 1831 393 c 0 0 0 0 962 1008 1111 10 4 2605 10 2506 2581 110 1367 g 0 0 0 0 367 547 123 151 5 0 2 0 1 476 145 t 0 0 0 0 638 189 513 23 0 0 2603 101 10 201 713
bin_SANGER_5_FBgn0045759_shift4 (bin_SANGER_5_FBgn0045759)				; oligos_6nt_mkv4_m4 versus bin_SANGER_5_FBgn0045759; m=9/31; ncol2=7; w=0; offset=0; strand=D; shift=4; score=0.540854; ----rTAAACA---- ; cor=; Ncor= a 0 0 0 0 9 0 20 20 20 0 19 0 0 0 0 c 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 g 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 1 20 0 0 0 0 1 0 0 0 0
Mirr_Cell_FBgn0014343_shift3 (Mirr_Cell_FBgn0014343)				; oligos_6nt_mkv4_m4 versus Mirr_Cell_FBgn0014343; m=10/31; ncol2=8; w=-1; offset=-1; strand=D; shift=3; score=0.535628; ---waawAACA---- ; cor=; Ncor= a 0 0 0 18 18 22 20 29 41 0 41 0 0 0 0 c 0 0 0 6 4 7 1 0 0 41 0 0 0 0 0 g 0 0 0 6 10 6 1 2 0 0 0 0 0 0 0 t 0 0 0 11 9 6 19 10 0 0 0 0 0 0 0
fd64A_SANGER_5_FBgn0004895_shift3 (fd64A_SANGER_5_FBgn0004895)				; oligos_6nt_mkv4_m4 versus fd64A_SANGER_5_FBgn0004895; m=11/31; ncol2=8; w=-1; offset=-1; strand=D; shift=3; score=0.533538; ---tvtAAACA---- ; cor=; Ncor= a 0 0 0 3 7 4 20 19 20 0 20 0 0 0 0 c 0 0 0 0 5 3 0 1 0 17 0 0 0 0 0 g 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 t 0 0 0 13 2 13 0 0 0 3 0 0 0 0 0
slp2_SANGER_5_FBgn0004567_shift4 (slp2_SANGER_5_FBgn0004567)				; oligos_6nt_mkv4_m4 versus slp2_SANGER_5_FBgn0004567; m=12/31; ncol2=8; w=0; offset=0; strand=D; shift=4; score=0.518635; ----rTAAACAa--- ; cor=; Ncor= a 0 0 0 0 6 0 18 18 18 0 18 11 0 0 0 c 0 0 0 0 0 1 0 0 0 18 0 3 0 0 0 g 0 0 0 0 12 0 0 0 0 0 0 3 0 0 0 t 0 0 0 0 0 17 0 0 0 0 0 1 0 0 0
HLH4C_da_SANGER_5_FBgn0000413_shift4 (HLH4C_da_SANGER_5_FBgn0000413)				; oligos_6nt_mkv4_m4 versus HLH4C_da_SANGER_5_FBgn0000413; m=13/31; ncol2=15; w=0; offset=0; strand=D; shift=4; score=0.51672; ----mammvCACCTG ; cor=; Ncor= a 0 0 0 0 9 12 11 11 10 0 23 0 1 0 0 c 0 0 0 0 9 3 6 6 6 23 0 21 22 0 1 g 0 0 0 0 5 5 2 1 7 0 0 1 0 0 22 t 0 0 0 0 0 3 4 5 0 0 0 1 0 23 0
HLH4C_da_SANGER_5_FBgn0011277_shift4 (HLH4C_da_SANGER_5_FBgn0011277)				; oligos_6nt_mkv4_m4 versus HLH4C_da_SANGER_5_FBgn0011277; m=14/31; ncol2=15; w=0; offset=0; strand=D; shift=4; score=0.51672; ----mammvCACCTG ; cor=; Ncor= a 0 0 0 0 9 12 11 11 10 0 23 0 1 0 0 c 0 0 0 0 9 3 6 6 6 23 0 21 22 0 1 g 0 0 0 0 5 5 2 1 7 0 0 1 0 0 22 t 0 0 0 0 0 3 4 5 0 0 0 1 0 23 0
Ara_Cell_FBgn0015904_shift3 (Ara_Cell_FBgn0015904)				; oligos_6nt_mkv4_m4 versus Ara_Cell_FBgn0015904; m=15/31; ncol2=8; w=-1; offset=-1; strand=D; shift=3; score=0.511889; ---raAwwACA---- ; cor=; Ncor= a 0 0 0 12 16 24 14 23 34 0 34 0 0 0 0 c 0 0 0 5 7 1 0 0 0 34 0 0 0 0 0 g 0 0 0 10 6 1 5 0 0 0 0 0 0 0 0 t 0 0 0 7 5 8 15 11 0 0 0 0 0 0 0
Caup_Cell_FBgn0015919_shift3 (Caup_Cell_FBgn0015919)				; oligos_6nt_mkv4_m4 versus Caup_Cell_FBgn0015919; m=16/31; ncol2=8; w=-1; offset=-1; strand=D; shift=3; score=0.502113; ---cwwtAACA---- ; cor=; Ncor= a 0 0 0 4 9 8 4 14 19 0 19 0 0 0 0 c 0 0 0 9 0 0 1 0 0 19 0 0 0 0 0 g 0 0 0 2 3 4 2 2 0 0 0 0 0 0 0 t 0 0 0 4 7 7 12 3 0 0 0 0 0 0 0
Mirr_SOLEXA_FBgn0014343_shift5 (Mirr_SOLEXA_FBgn0014343)				; oligos_6nt_mkv4_m4 versus Mirr_SOLEXA_FBgn0014343; m=17/31; ncol2=6; w=0; offset=1; strand=D; shift=5; score=0.483969; -----wwwACA---- ; cor=; Ncor= a 0 0 0 0 0 550 410 782 1415 0 1415 0 0 0 0 c 0 0 0 0 0 158 93 0 0 1415 0 0 0 0 0 g 0 0 0 0 0 327 282 204 0 0 0 0 0 0 0 t 0 0 0 0 0 380 630 429 0 0 0 0 0 0 0
Ara_SOLEXA_FBgn0015904_shift5 (Ara_SOLEXA_FBgn0015904)				; oligos_6nt_mkv4_m4 versus Ara_SOLEXA_FBgn0015904; m=18/31; ncol2=6; w=0; offset=1; strand=D; shift=5; score=0.479754; -----awwACA---- ; cor=; Ncor= a 0 0 0 0 0 155 97 193 313 0 313 0 0 0 0 c 0 0 0 0 0 36 0 0 0 313 0 0 0 0 0 g 0 0 0 0 0 44 45 38 0 0 0 0 0 0 0 t 0 0 0 0 0 78 171 82 0 0 0 0 0 0 0
foxo_SANGER_10_FBgn0038197_rc_shift2 (foxo_SANGER_10_FBgn0038197_rc)				; oligos_6nt_mkv4_m4 versus foxo_SANGER_10_FBgn0038197_rc; m=19/31; ncol2=9; w=-2; offset=-2; strand=R; shift=2; score=0.477287; --ycrwAAACA---- ; cor=; Ncor= a 0 0 0 3 8 8 16 16 20 0 20 0 0 0 0 c 0 0 6 12 0 0 1 4 0 18 0 0 0 0 0 g 0 0 3 3 11 0 0 0 0 0 0 0 0 0 0 t 0 0 11 2 1 12 3 0 0 2 0 0 0 0 0
slp1_NAR_FBgn0003430_rc_shift1 (slp1_NAR_FBgn0003430_rc)				; oligos_6nt_mkv4_m4 versus slp1_NAR_FBgn0003430_rc; m=20/31; ncol2=11; w=-3; offset=-3; strand=R; shift=1; score=0.468501; -wryrtAAACAm--- ; cor=; Ncor= a 0 19 21 1 11 10 39 40 41 0 41 16 0 0 0 c 0 4 3 15 7 4 2 1 0 38 0 14 0 0 0 g 0 3 13 8 22 0 0 0 0 0 0 3 0 0 0 t 0 15 4 17 1 27 0 0 0 3 0 8 0 0 0
CG16899_SANGER_5_FBgn0037735_shift3 (CG16899_SANGER_5_FBgn0037735)				; oligos_6nt_mkv4_m4 versus CG16899_SANGER_5_FBgn0037735; m=21/31; ncol2=9; w=-1; offset=-1; strand=D; shift=3; score=0.468017; ---vrTAAACAA--- ; cor=; Ncor= a 0 0 0 6 10 1 21 20 21 0 21 15 0 0 0 c 0 0 0 5 2 2 0 0 0 18 0 2 0 0 0 g 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 18 0 1 0 3 0 4 0 0 0
Caup_SOLEXA_FBgn0015919_shift5 (Caup_SOLEXA_FBgn0015919)				; oligos_6nt_mkv4_m4 versus Caup_SOLEXA_FBgn0015919; m=22/31; ncol2=6; w=0; offset=1; strand=D; shift=5; score=0.464906; -----wtwACA---- ; cor=; Ncor= a 0 0 0 0 0 999 577 1415 2904 2 2904 0 0 0 0 c 0 0 0 0 0 460 201 0 0 2902 0 0 0 0 0 g 0 0 0 0 0 626 639 511 0 0 0 0 0 0 0 t 0 0 0 0 0 819 1487 978 0 0 0 0 0 0 0
CG11617_SOLEXA_FBgn0031232_shift3 (CG11617_SOLEXA_FBgn0031232)				; oligos_6nt_mkv4_m4 versus CG11617_SOLEXA_FBgn0031232; m=23/31; ncol2=8; w=-1; offset=-1; strand=D; shift=3; score=0.454991; ---wtwTwACA---- ; cor=; Ncor= a 0 0 0 370 281 352 133 483 1159 7 1148 0 0 0 0 c 0 0 0 201 262 176 167 0 0 1152 2 0 0 0 0 g 0 0 0 211 257 176 20 283 0 0 9 0 0 0 0 t 0 0 0 377 359 455 839 393 0 0 0 0 0 0 0
ac_da_SANGER_5_FBgn0000022_shift8 (ac_da_SANGER_5_FBgn0000022)				; oligos_6nt_mkv4_m4 versus ac_da_SANGER_5_FBgn0000022; m=24/31; ncol2=8; w=0; offset=4; strand=D; shift=8; score=0.432417; --------rCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 10 0 19 0 0 0 0 c 0 0 0 0 0 0 0 0 1 19 0 18 19 0 0 g 0 0 0 0 0 0 0 0 7 0 0 1 0 0 19 t 0 0 0 0 0 0 0 0 1 0 0 0 0 19 0
ac_da_SANGER_5_FBgn0000413_shift8 (ac_da_SANGER_5_FBgn0000413)				; oligos_6nt_mkv4_m4 versus ac_da_SANGER_5_FBgn0000413; m=25/31; ncol2=8; w=0; offset=4; strand=D; shift=8; score=0.432417; --------rCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 10 0 19 0 0 0 0 c 0 0 0 0 0 0 0 0 1 19 0 18 19 0 0 g 0 0 0 0 0 0 0 0 7 0 0 1 0 0 19 t 0 0 0 0 0 0 0 0 1 0 0 0 0 19 0
sc_da_SANGER_10_FBgn0000413_shift8 (sc_da_SANGER_10_FBgn0000413)				; oligos_6nt_mkv4_m4 versus sc_da_SANGER_10_FBgn0000413; m=26/31; ncol2=8; w=0; offset=4; strand=D; shift=8; score= 0.4236; --------rCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11 0 24 0 0 0 0 c 0 0 0 0 0 0 0 0 5 23 0 21 24 0 0 g 0 0 0 0 0 0 0 0 7 0 0 1 0 0 24 t 0 0 0 0 0 0 0 0 0 0 0 2 0 24 0
sc_da_SANGER_10_FBgn0004170_shift8 (sc_da_SANGER_10_FBgn0004170)				; oligos_6nt_mkv4_m4 versus sc_da_SANGER_10_FBgn0004170; m=27/31; ncol2=8; w=0; offset=4; strand=D; shift=8; score= 0.4236; --------rCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11 0 24 0 0 0 0 c 0 0 0 0 0 0 0 0 5 23 0 21 24 0 0 g 0 0 0 0 0 0 0 0 7 0 0 1 0 0 24 t 0 0 0 0 0 0 0 0 0 0 0 2 0 24 0
fkh_NAR_FBgn0000659_rc_shift0 (fkh_NAR_FBgn0000659_rc)				; oligos_6nt_mkv4_m4 versus fkh_NAR_FBgn0000659_rc; m=28/31; ncol2=11; w=-4; offset=-4; strand=R; shift=0; score=0.421441; tTrrryAAACA---- ; cor=; Ncor= a 4 3 14 11 8 0 26 27 27 0 24 0 0 0 0 c 4 1 2 3 2 14 1 0 0 22 0 0 0 0 0 g 4 0 11 7 13 0 0 0 0 0 0 0 0 0 0 t 15 23 0 6 4 13 0 0 0 5 3 0 0 0 0
HLH54F_da_SANGER_5_FBgn0000413_shift7 (HLH54F_da_SANGER_5_FBgn0000413)				; oligos_6nt_mkv4_m4 versus HLH54F_da_SANGER_5_FBgn0000413; m=29/31; ncol2=11; w=0; offset=3; strand=D; shift=7; score=0.416631; -------mmCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 0 12 12 0 24 0 0 0 0 c 0 0 0 0 0 0 0 10 10 23 0 24 23 1 0 g 0 0 0 0 0 0 0 1 2 0 0 0 0 2 24 t 0 0 0 0 0 0 0 1 0 1 0 0 1 21 0
HLH54F_da_SANGER_5_FBgn0022740_shift7 (HLH54F_da_SANGER_5_FBgn0022740)				; oligos_6nt_mkv4_m4 versus HLH54F_da_SANGER_5_FBgn0022740; m=30/31; ncol2=11; w=0; offset=3; strand=D; shift=7; score=0.416631; -------mmCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 0 12 12 0 24 0 0 0 0 c 0 0 0 0 0 0 0 10 10 23 0 24 23 1 0 g 0 0 0 0 0 0 0 1 2 0 0 0 0 2 24 t 0 0 0 0 0 0 0 1 0 1 0 0 1 21 0
CG31782-F9-11_SOLEXA_FBgn0051782_rc_shift7 (CG31782-F9-11_SOLEXA_FBgn0051782_rc)				; oligos_6nt_mkv4_m4 versus CG31782-F9-11_SOLEXA_FBgn0051782_rc; m=31/31; ncol2=11; w=0; offset=3; strand=R; shift=7; score=0.400872; -------ctCACCac ; cor=; Ncor= a 0 0 0 0 0 0 0 269 617 42 2023 0 0 1676 407 c 0 0 0 0 0 0 0 1324 287 1979 143 2554 2552 582 1464 g 0 0 0 0 0 0 0 584 195 25 0 0 0 27 305 t 0 0 0 0 0 0 0 375 1453 506 386 0 1 269 377