RSAT - peak-motifs result

Analysis: WT_CPT (18/12/2025 15:45)

peak-motifs  -v 1 -title WT_CPT -i $RSAT/public_html/tmp/www-data/2025/12/18/peak-motifs.2025-12-18.152754_2025-12-18.152754_k71jEh/peak-motifspeak_seq -max_seq_len 1000 -markov auto -disco oligos,positions,local_words -nmotifs 5 -minol 6 -maxol 7 -no_merge_lengths -2str -origin center -motif_db JASPAR2024_CORE_vertebrates_non-redundant tf $RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt -scan_markov 1 -task purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,motifs_vs_db,scan -prefix peak-motifs -noov -img_format png -outdir $RSAT/public_html/tmp/www-data/2025/12/18/peak-motifs.2025-12-18.152754_2025-12-18.152754_k71jEh

motif discovery
oligos_6nt_mkv4	oligos_6nt_mkv4_m1 assembly: atgactcat (sig=228.95; e-value=1.1e-229) RC: atgagtcat oligos_6nt_mkv4_m2 assembly: agactg (sig=67.69; e-value=2e-68) RC: cagtct oligos_6nt_mkv4_m3 assembly: cactcca (sig=63.54; e-value=2.9e-64) RC: tggagtg oligos_6nt_mkv4_m4 assembly: gactaa (sig=59.23; e-value=5.9e-60) RC: ttagtc oligos_6nt_mkv4_m5 assembly: agagtg (sig=58.53; e-value=3e-59) RC: cactct	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
local_words_6nt	Not a single significant pattern	[local_words_6nt]
positions_6nt	positions_6nt_m1 assembly: ggatgatgactcacca (sig=300; e-value=1e-300) RC: tggtgagtcatcatcc positions_6nt_m2 assembly: tggtgagtcacca (sig=300; e-value=1e-300) RC: tggtgactcacca positions_6nt_m3 assembly: ggatgatgactcatcatcc (sig=300; e-value=1e-300) RC: ggatgatgagtcatcatcc positions_6nt_m4 assembly: tggtgactcag (sig=300; e-value=1e-300) RC: ctgagtcacca positions_6nt_m5 assembly: cagtgactcacca (sig=300; e-value=1e-300) RC: tggtgagtcactg	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
oligos_7nt_mkv5	oligos_7nt_mkv5_m1 assembly: tgactcat (sig=84.86; e-value=1.4e-85) RC: atgagtca oligos_7nt_mkv5_m2 assembly: agactct (sig=61.83; e-value=1.5e-62) RC: agagtct oligos_7nt_mkv5_m3 assembly: agactcc (sig=58.04; e-value=9.1e-59) RC: ggagtct oligos_7nt_mkv5_m4 assembly: tgaatcat (sig=57.11; e-value=7.8e-58) RC: atgattca oligos_7nt_mkv5_m5 assembly: agagtcc (sig=56.35; e-value=4.5e-57) RC: ggactct	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
local_words_7nt	Not a single significant pattern	[local_words_7nt]
positions_7nt	positions_7nt_m1 assembly: tgggtgatgagtcactg (sig=300; e-value=1e-300) RC: cagtgactcatcaccca positions_7nt_m2 assembly: gctgagtcactg (sig=300; e-value=1e-300) RC: cagtgactcagc positions_7nt_m3 assembly: cagtgactcacc (sig=300; e-value=1e-300) RC: ggtgagtcactg positions_7nt_m4 assembly: tgggtgatgactcacc (sig=300; e-value=1e-300) RC: ggtgagtcatcaccca positions_7nt_m5 assembly: tctgactcatcaccca (sig=300; e-value=1e-300) RC: tgggtgatgagtcaga	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]

Motif discovery
Motif 1   oligos_6nt_mkv4_m1	k-mer sig=228.95; evalue=1.1e-229 ydrTGACTCAtyc GRATGAGTCAYHR	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ydrTGACTCAtyc BACH2 MA1101.3 D 11 0.8462 0.924 0.782 NA NA FOSL2 MA0478.2 D 10 0.7692 0.972 0.747 NA NA Mafg MA0659.4 D 12 0.9231 0.805 0.743 NA NA Total matches= 34 (31 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 10837 (43.87%) Max nb of predicted sites per peak: 62  (chromosome_GRCh38_16_1_90338345_1:89994787-89996140()) Mean nb of predicted sites per peak: 1.65	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 2   oligos_6nt_mkv4_m2	k-mer sig=67.69; evalue=2e-68 msAGACTGcr YGCAGTCTSK	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor msAGACTGcr FEZF2 MA2341.1 R 8 0.8000 0.721 0.577 NA NA Smad4 MA1153.2 R 7 0.7000 0.724 0.507 NA NA SMAD2 MA1964.2 D 6 0.6000 0.839 0.503 NA NA Total matches= 3		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 1131 (4.58%) Max nb of predicted sites per peak: 3  (chromosome_GRCh38_12_1_133275309_1:52925134-52925652()) Mean nb of predicted sites per peak: 1.04	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 3   oligos_6nt_mkv4_m3	k-mer sig=63.54; evalue=2.9e-64 yyCACTCCabc GVTGGAGTGRR	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor yyCACTCCabc SREBF2 MA0596.1 R 10 0.9091 0.711 0.646 NA NA SREBF1 MA0595.1 D 10 0.9091 0.702 0.638 NA NA TEAD1 MA0090.4 D 9 0.8182 0.714 0.584 NA NA Total matches= 15 (12 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 1299 (5.26%) Max nb of predicted sites per peak: 13  (chromosome_GRCh38_16_1_90338345_1:34085136-34085321()) Mean nb of predicted sites per peak: 1.06	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 4   oligos_6nt_mkv4_m4	k-mer sig=59.23; evalue=5.9e-60 rtGACTAAta TATTAGTCAY	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor rtGACTAAta FOSL1::JUNB MA1137.2 D 9 0.9000 0.814 0.733 NA NA FOSL1::JUN MA1128.2 D 9 0.9000 0.791 0.712 NA NA FOS::JUND MA1141.2 R 9 0.9000 0.788 0.709 NA NA Total matches= 40 (37 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 2467 (9.99%) Max nb of predicted sites per peak: 13  (chromosome_GRCh38_10_1_133797422_1:425178-425660()) Mean nb of predicted sites per peak: 1.09	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 5   oligos_6nt_mkv4_m5	k-mer sig=58.53; evalue=3e-59 vsAGAGTGag CTCACTCTSB	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor vsAGAGTGag NKX2-2 MA1645.2 R 8 0.8000 0.703 0.563 NA NA MSANTD3 MA1523.2 R 7 0.7000 0.769 0.538 NA NA NKX2-5 MA0063.3 R 7 0.7000 0.701 0.491 NA NA Total matches= 4 (1 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 1841 (7.45%) Max nb of predicted sites per peak: 31  (chromosome_GRCh38_10_1_133797422_1:3313913-3315048()) Mean nb of predicted sites per peak: 1.07	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 6   positions_6nt_m1	k-mer sig=300; evalue=1e-300 drggaTGATGACTCAcmmct AGKKGTGAGTCATCATCCYH	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor drggaTGATGACTCAcmmct Mafg MA0659.4 D 12 0.6000 0.825 0.495 NA NA Bach1::Mafk MA0591.2 D 12 0.6000 0.808 0.485 NA NA BACH2 MA1101.3 R 11 0.5500 0.867 0.477 NA NA Total matches= 25 (22 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 6967 (28.20%) Max nb of predicted sites per peak: 33  (chromosome_GRCh38_16_1_90338345_1:89994787-89996140()) Mean nb of predicted sites per peak: 1.24	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 7   positions_6nt_m2	k-mer sig=300; evalue=1e-300 agkggTGAGTCACcayk MRTGGTGACTCACCMCT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor agkggTGAGTCACcayk Bach1::Mafk MA0591.2 R 12 0.7059 0.792 0.559 NA NA Mafg MA0659.4 R 12 0.7059 0.787 0.555 NA NA FOSL2 MA0478.2 R 10 0.5882 0.943 0.555 NA NA Total matches= 32 (29 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 7832 (31.70%) Max nb of predicted sites per peak: 29  (chromosome_GRCh38_16_1_90338345_1:89994787-89996140()) Mean nb of predicted sites per peak: 1.52	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 8   positions_6nt_m3	k-mer sig=300; evalue=1e-300 wwkraTgATGACTCATcatycww WWGRATGATGAGTCATCATYMWW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wwkraTgATGACTCATcatycww Mafg MA0659.4 D 12 0.5217 0.859 0.448 NA NA Bach1::Mafk MA0591.2 D 12 0.5217 0.859 0.448 NA NA BACH2 MA1101.3 D 11 0.4783 0.907 0.434 NA NA Total matches= 10 (7 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 4306 (17.43%) Max nb of predicted sites per peak: 40  (chromosome_GRCh38_16_1_90338345_1:89994787-89996140()) Mean nb of predicted sites per peak: 1.52	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 9   positions_6nt_m4	k-mer sig=300; evalue=1e-300 crtggTGACTCAkmc GKMTGAGTCACCAYG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor crtggTGACTCAkmc Mafg MA0659.4 D 12 0.8000 0.835 0.668 NA NA Bach1::Mafk MA0591.2 D 12 0.8000 0.832 0.666 NA NA FOSL2 MA0478.2 D 10 0.6667 0.965 0.644 NA NA Total matches= 33 (30 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 9267 (37.51%) Max nb of predicted sites per peak: 30  (chromosome_GRCh38_16_1_90338345_1:89994787-89996140()) Mean nb of predicted sites per peak: 1.31	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 10   positions_6nt_m5	k-mer sig=300; evalue=1e-300 mrcaGTGACTCAccmyt ARKGGTGAGTCACTGYK	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor mrcaGTGACTCAccmyt Bach1::Mafk MA0591.2 D 12 0.7059 0.775 0.547 NA NA FOSL2 MA0478.2 D 10 0.5882 0.930 0.547 NA NA Mafg MA0659.4 D 12 0.7059 0.748 0.528 NA NA Total matches= 34 (31 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 7629 (30.88%) Max nb of predicted sites per peak: 21  (chromosome_GRCh38_16_1_90338345_1:89994787-89996140()) Mean nb of predicted sites per peak: 1.48	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 11   oligos_7nt_mkv5_m1	k-mer sig=84.86; evalue=1.4e-85 rrTGACTCAtyc GRATGAGTCAYY	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor rrTGACTCAtyc BACH2 MA1101.3 D 11 0.9167 0.919 0.842 NA NA FOSL2 MA0478.2 D 10 0.8333 0.968 0.807 NA NA Mafg MA0659.4 D 12 1.0000 0.801 0.801 NA NA Total matches= 34 (31 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 10878 (44.04%) Max nb of predicted sites per peak: 60  (chromosome_GRCh38_16_1_90338345_1:89994787-89996140()) Mean nb of predicted sites per peak: 1.66	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 12   oligos_7nt_mkv5_m2	k-mer sig=61.83; evalue=1.5e-62 wwAGACTCTrw WYAGAGTCTWW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wwAGACTCTrw Smad4 MA1153.2 R 7 0.6364 0.716 0.456 NA NA SMAD2 MA1964.2 D 6 0.5455 0.826 0.451 NA NA Total matches= 2		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 639 (2.59%) Max nb of predicted sites per peak: 2  (chromosome_GRCh38_1_1_248956422_1:83134428-83134556()) Mean nb of predicted sites per peak: 1.02	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 13   oligos_7nt_mkv5_m3	k-mer sig=58.04; evalue=9.1e-59 ycAGACTCCrs SYGGAGTCTGR	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ycAGACTCCrs SMAD2 MA1964.2 D 6 0.5455 0.849 0.463 NA NA Smad4 MA1153.2 R 7 0.6364 0.721 0.459 NA NA Total matches= 2		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 653 (2.64%) Max nb of predicted sites per peak: 2  (chromosome_GRCh38_1_1_248956422_1:21607948-21608169()) Mean nb of predicted sites per peak: 1.02	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 14   oligos_7nt_mkv5_m4	k-mer sig=57.11; evalue=7.8e-58 rrTGAvTCATbh DVATGABTCAYY	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor rrTGAvTCATbh BACH2 MA1101.3 R 11 0.9167 0.915 0.838 NA NA FOSL2 MA0478.2 R 10 0.8333 0.946 0.788 NA NA NFE2 MA0841.2 R 10 0.8333 0.927 0.772 NA NA Total matches= 36 (33 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 8751 (35.42%) Max nb of predicted sites per peak: 33  (chromosome_GRCh38_16_1_90338345_1:89994787-89996140()) Mean nb of predicted sites per peak: 1.50	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 15   oligos_7nt_mkv5_m5	k-mer sig=56.35; evalue=4.5e-57 yyAGAGTCCdg CHGGACTCTRR	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor yyAGAGTCCdg HNF4G MA0484.3 D 9 0.8182 0.753 0.616 NA NA HNF4A MA0114.5 D 9 0.8182 0.749 0.613 NA NA Prdm14 MA1998.2 R 8 0.7273 0.764 0.556 NA NA Total matches= 3		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 529 (2.14%) Max nb of predicted sites per peak: 5  (chromosome_GRCh38_13_1_114364328_1:111216366-111216616()) Mean nb of predicted sites per peak: 1.03	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 16   positions_7nt_m1	k-mer sig=300; evalue=1e-300 ttacrgkgATGAGTCACtgyk MRCAGTGACTCATCMCYGTAA	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ttacrgkgATGAGTCACtgyk BACH2 MA1101.3 R 11 0.5238 0.873 0.457 NA NA FOSL2 MA0478.2 R 10 0.4762 0.941 0.448 NA NA Bach1::Mafk MA0591.2 R 12 0.5714 0.782 0.447 NA NA Total matches= 20 (17 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 8581 (34.74%) Max nb of predicted sites per peak: 25  (chromosome_GRCh38_16_1_90338345_1:89994787-89996140()) Mean nb of predicted sites per peak: 1.29	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 17   positions_7nt_m2	k-mer sig=300; evalue=1e-300 rkgcTGAGTCACygyg CRCRGTGACTCAGCMY	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor rkgcTGAGTCACygyg Bach1::Mafk MA0591.2 R 12 0.7500 0.849 0.637 NA NA Mafg MA0659.4 R 12 0.7500 0.826 0.620 NA NA MAF::NFE2 MA0501.2 R 11 0.6875 0.860 0.591 NA NA Total matches= 34 (31 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 8629 (34.93%) Max nb of predicted sites per peak: 30  (chromosome_GRCh38_16_1_90338345_1:89994787-89996140()) Mean nb of predicted sites per peak: 1.22	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 18   positions_7nt_m3	k-mer sig=300; evalue=1e-300 mrcrGTGACTCAcccy RGGGTGAGTCACYGYK	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor mrcrGTGACTCAcccy FOSL2 MA0478.2 D 10 0.6250 0.933 0.583 NA NA Bach1::Mafk MA0591.2 D 12 0.7500 0.764 0.573 NA NA Mafg MA0659.4 D 12 0.7500 0.744 0.558 NA NA Total matches= 34 (31 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 7864 (31.83%) Max nb of predicted sites per peak: 22  (chromosome_GRCh38_16_1_90338345_1:89994787-89996140()) Mean nb of predicted sites per peak: 1.52	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 19   positions_7nt_m4	k-mer sig=300; evalue=1e-300 tdrvrgtgATGACTCAcccy RGGGTGAGTCATCACYBYHA	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor tdrvrgtgATGACTCAcccy Mafg MA0659.4 D 12 0.6000 0.827 0.496 NA NA Bach1::Mafk MA0591.2 D 12 0.6000 0.811 0.487 NA NA BACH2 MA1101.3 R 11 0.5500 0.869 0.478 NA NA Total matches= 24 (21 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 7997 (32.37%) Max nb of predicted sites per peak: 51  (chromosome_GRCh38_16_1_90338345_1:89994787-89996140()) Mean nb of predicted sites per peak: 1.38	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 20   positions_7nt_m5	k-mer sig=300; evalue=1e-300 dykmTGACTCATcmcywwww WWWWRGKGATGAGTCAKMRH	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor dykmTGACTCATcmcywwww BACH2 MA1101.3 D 11 0.5500 0.904 0.497 NA NA Mafg MA0659.4 D 12 0.6000 0.817 0.490 NA NA Bach1::Mafk MA0591.2 D 12 0.6000 0.801 0.480 NA NA Total matches= 23 (20 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 9077 (36.74%) Max nb of predicted sites per peak: 55  (chromosome_GRCh38_16_1_90338345_1:89994787-89996140()) Mean nb of predicted sites per peak: 1.36	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]

Command:  peak-motifs  -v 1 -title WT_CPT -i $RSAT/public_html/tmp/www-data/2025/12/18/peak-motifs.2025-12-18.152754_2025-12-18.152754_k71jEh/peak-motifspeak_seq -max_seq_len 1000 -markov auto -disco oligos,positions,local_words -nmotifs 5 -minol 6 -maxol 7 -no_merge_lengths -2str -origin center -motif_db JASPAR2024_CORE_vertebrates_non-redundant tf $RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt -scan_markov 1 -task purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,motifs_vs_db,scan -prefix peak-motifs -noov -img_format png -outdir $RSAT/public_html/tmp/www-data/2025/12/18/peak-motifs.2025-12-18.152754_2025-12-18.152754_k71jEh

Warning: Not a single pattern was found in file tmp/www-data/2025/12/18/peak-motifs.2025-12-18.152754_2025-12-18.152754_k71jEh/results/local_words_6nt/peak-motifs_local_words-2str-noov_6nt_windgroup50.tab

Warning: Not a single pattern was found in file tmp/www-data/2025/12/18/peak-motifs.2025-12-18.152754_2025-12-18.152754_k71jEh/results/local_words_7nt/peak-motifs_local_words-2str-noov_7nt_windgroup50.tab